RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 DPYSL5Q9BPU6 564 aa17.42■□□□□ 0.38
LSM5-204ENST00000409909 TBC1D10AQ9BXI6 508 aa17.42■□□□□ 0.38
LSM5-204ENST00000409909 TSGA10Q9BZW7 698 aa17.42■□□□□ 0.38
LSM5-204ENST00000409909 SMOXQ9NWM0 555 aa17.42■□□□□ 0.38
LSM5-204ENST00000409909 FOXJ2Q9P0K8 574 aa17.42■□□□□ 0.38
LSM5-204ENST00000409909 FKBPLQ9UIM3 349 aa17.42■□□□□ 0.38
LSM5-204ENST00000409909 ARHGAP6O43182 974 aa17.41■□□□□ 0.38
LSM5-204ENST00000409909 DUX1O43812 170 aa17.41■□□□□ 0.38
LSM5-204ENST00000409909 ZNF189O75820 626 aaPredicted RBP17.41■□□□□ 0.38
LSM5-204ENST00000409909 PRAMEF1O95521 474 aa17.41■□□□□ 0.38
LSM5-204ENST00000409909 DRG2P55039 364 aaKnown RBP17.41■□□□□ 0.38
LSM5-204ENST00000409909 TMPRSS3P57727 454 aa17.41■□□□□ 0.38
LSM5-204ENST00000409909 XIAPP98170 497 aa17.41■□□□□ 0.38
LSM5-204ENST00000409909 GTF2H3Q13889 308 aa17.41■□□□□ 0.38
LSM5-204ENST00000409909 TGIF1Q15583 401 aa17.41■□□□□ 0.38
LSM5-204ENST00000409909 AGAP9Q5VTM2 703 aa17.41■□□□□ 0.38
LSM5-204ENST00000409909 WDR74Q6RFH5 385 aaPredicted RBP17.41■□□□□ 0.38
LSM5-204ENST00000409909 ABRAXAS1Q6UWZ7 409 aa17.41■□□□□ 0.38
LSM5-204ENST00000409909 WASH2PQ6VEQ5 465 aa17.41■□□□□ 0.38
LSM5-204ENST00000409909 GPR155Q7Z3F1 870 aa17.41■□□□□ 0.38
LSM5-204ENST00000409909 OR13C4Q8NGS5 318 aa17.41■□□□□ 0.38
LSM5-204ENST00000409909 NCSTNQ92542 709 aa17.41■□□□□ 0.38
LSM5-204ENST00000409909 PMEPA1Q969W9 287 aa17.41■□□□□ 0.38
LSM5-204ENST00000409909 TTC25Q96NG3 672 aa17.41■□□□□ 0.38
LSM5-204ENST00000409909 PPP1R2P1Q96PQ5 205 aa17.41■□□□□ 0.38
LSM5-204ENST00000409909 STN1Q9H668 368 aaKnown RBP17.41■□□□□ 0.38
LSM5-204ENST00000409909 WASH6PQ9NQA3 447 aa17.41■□□□□ 0.38
LSM5-204ENST00000409909 AKAP7Q9P0M2 348 aaPredicted RBP17.41■□□□□ 0.38
LSM5-204ENST00000409909 WDR37Q9Y2I8 494 aa17.41■□□□□ 0.38
LSM5-204ENST00000409909 CFAP46Q8IYW2 2715 aa17.41■□□□□ 0.38
LSM5-204ENST00000409909 OR2AG2A6NM03 316 aa17.4■□□□□ 0.38
LSM5-204ENST00000409909 OR52A4PA6NMU1 304 aa17.4■□□□□ 0.38
LSM5-204ENST00000409909 PDZK1P1A8MUH7 402 aa17.4■□□□□ 0.38
LSM5-204ENST00000409909 EFSO43281 561 aa17.4■□□□□ 0.38
LSM5-204ENST00000409909 LDB2O43679 373 aa17.4■□□□□ 0.38
LSM5-204ENST00000409909 KRT86O43790 486 aa17.4■□□□□ 0.38
LSM5-204ENST00000409909 POP7O75817 140 aaKnown RBP17.4■□□□□ 0.38
LSM5-204ENST00000409909 SRP72O76094 671 aaKnown RBP17.4■□□□□ 0.38
LSM5-204ENST00000409909 IDSP22304 550 aa17.4■□□□□ 0.38
LSM5-204ENST00000409909 MAPK9P45984 424 aa17.4■□□□□ 0.38
LSM5-204ENST00000409909 PPM1FP49593 454 aaPredicted RBP17.4■□□□□ 0.38
LSM5-204ENST00000409909 ARSDP51689 593 aa17.4■□□□□ 0.38
LSM5-204ENST00000409909 ZNF140P52738 457 aaPredicted RBP17.4■□□□□ 0.38
LSM5-204ENST00000409909 EPHA4P54764 986 aa17.4■□□□□ 0.38
LSM5-204ENST00000409909 UCNP55089 124 aa17.4■□□□□ 0.38
LSM5-204ENST00000409909 CLCA4Q14CN2 919 aa17.4■□□□□ 0.38
LSM5-204ENST00000409909 ARHGAP40Q5TG30 622 aa17.4■□□□□ 0.38
LSM5-204ENST00000409909 MEI1Q5TIA1 1274 aa17.4■□□□□ 0.38
LSM5-204ENST00000409909 TMEM220Q6QAJ8 160 aa17.4■□□□□ 0.38
LSM5-204ENST00000409909 FAM83HQ6ZRV2 1179 aaPredicted RBP17.4■□□□□ 0.38
LSM5-204ENST00000409909 MICALCLQ6ZW33 695 aa17.4■□□□□ 0.38
LSM5-204ENST00000409909 AMZ2Q86W34 360 aa17.4■□□□□ 0.38
LSM5-204ENST00000409909 ZFAND4Q86XD8 727 aa17.4■□□□□ 0.38
LSM5-204ENST00000409909 TAB3Q8N5C8 712 aaPredicted RBP17.4■□□□□ 0.38
LSM5-204ENST00000409909 NAT14Q8WUY8 206 aa17.4■□□□□ 0.38
LSM5-204ENST00000409909 RTP4Q96DX8 246 aa17.4■□□□□ 0.38
LSM5-204ENST00000409909 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.4■□□□□ 0.38
LSM5-204ENST00000409909 ZCCHC2Q9C0B9 1178 aaKnown RBP17.4■□□□□ 0.38
LSM5-204ENST00000409909 ASB8Q9H765 288 aa17.4■□□□□ 0.38
LSM5-204ENST00000409909 UCK1Q9HA47 277 aa17.4■□□□□ 0.38
LSM5-204ENST00000409909 OCIAD1Q9NX40 245 aa17.4■□□□□ 0.38
LSM5-204ENST00000409909 OGFRQ9NZT2 677 aa17.4■□□□□ 0.38
LSM5-204ENST00000409909 SLC30A1Q9Y6M5 507 aa17.4■□□□□ 0.38
LSM5-204ENST00000409909 LILRA5A6NI73 299 aa17.39■□□□□ 0.37
LSM5-204ENST00000409909 AGAP14A8MT82 685 aa17.39■□□□□ 0.37
LSM5-204ENST00000409909 A8MU76 341 aa17.39■□□□□ 0.37
LSM5-204ENST00000409909 CCL22O00626 93 aa17.39■□□□□ 0.37
LSM5-204ENST00000409909 CRTAMO95727 393 aa17.39■□□□□ 0.37
LSM5-204ENST00000409909 VIPP01282 170 aa17.39■□□□□ 0.37
LSM5-204ENST00000409909 TPH1P17752 444 aa17.39■□□□□ 0.37
LSM5-204ENST00000409909 TMPRSS15P98073 1019 aa17.39■□□□□ 0.37
LSM5-204ENST00000409909 DMPKQ09013 629 aa17.39■□□□□ 0.37
LSM5-204ENST00000409909 OASLQ15646 514 aaKnown RBP17.39■□□□□ 0.37
LSM5-204ENST00000409909 SNAP47Q5SQN1 464 aa17.39■□□□□ 0.37
LSM5-204ENST00000409909 TMEM26Q6ZUK4 368 aa17.39■□□□□ 0.37
LSM5-204ENST00000409909 ARHGAP22Q7Z5H3 698 aa17.39■□□□□ 0.37
LSM5-204ENST00000409909 SLC13A5Q86YT5 568 aaPredicted RBP17.39■□□□□ 0.37
LSM5-204ENST00000409909 BEND7Q8N7W2 519 aaPredicted RBP17.39■□□□□ 0.37
LSM5-204ENST00000409909 AVL9Q8NBF6 648 aa17.39■□□□□ 0.37
LSM5-204ENST00000409909 AGBL5Q8NDL9 886 aa17.39■□□□□ 0.37
LSM5-204ENST00000409909 SGF29Q96ES7 293 aa17.39■□□□□ 0.37
LSM5-204ENST00000409909 SLC40A1Q9NP59 571 aa17.39■□□□□ 0.37
LSM5-204ENST00000409909 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.39■□□□□ 0.37
LSM5-204ENST00000409909 FEZ2Q9UHY8 353 aaPredicted RBP17.39■□□□□ 0.37
LSM5-204ENST00000409909 SGTAO43765 313 aa17.38■□□□□ 0.37
LSM5-204ENST00000409909 LIASO43766 372 aa17.38■□□□□ 0.37
LSM5-204ENST00000409909 KCNJ13O60928 360 aa17.38■□□□□ 0.37
LSM5-204ENST00000409909 VCLP18206 1134 aa17.38■□□□□ 0.37
LSM5-204ENST00000409909 MSH3P20585 1137 aa17.38■□□□□ 0.37
LSM5-204ENST00000409909 AKT1P31749 480 aa17.38■□□□□ 0.37
LSM5-204ENST00000409909 CSTF2P33240 577 aaKnown RBP eCLIP17.38■□□□□ 0.37
LSM5-204ENST00000409909 PDE1BQ01064 536 aa17.38■□□□□ 0.37
LSM5-204ENST00000409909 VAC14Q08AM6 782 aa17.38■□□□□ 0.37
LSM5-204ENST00000409909 SRSF6Q13247 344 aaKnown RBP17.38■□□□□ 0.37
LSM5-204ENST00000409909 FNBP1LQ5T0N5 605 aa17.38■□□□□ 0.37
LSM5-204ENST00000409909 SEL1L2Q5TEA6 688 aa17.38■□□□□ 0.37
LSM5-204ENST00000409909 DET1Q7L5Y6 550 aa17.38■□□□□ 0.37
LSM5-204ENST00000409909 LRRC8AQ8IWT6 810 aa17.38■□□□□ 0.37
LSM5-204ENST00000409909 TRIM48Q8IWZ4 208 aa17.38■□□□□ 0.37
LSM5-204ENST00000409909 BMPERQ8N8U9 685 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms