RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 EIF2B4Q9UI10 523 aaKnown RBP20.45■□□□□ 0.86
USP39-203ENST00000409470 PSMD12O00232 456 aaPredicted RBP20.44■□□□□ 0.86
USP39-203ENST00000409470 GIPC1O14908 333 aa20.44■□□□□ 0.86
USP39-203ENST00000409470 CYP17A1P05093 508 aa20.44■□□□□ 0.86
USP39-203ENST00000409470 NSG1P42857 185 aa20.44■□□□□ 0.86
USP39-203ENST00000409470 DGKGP49619 791 aa20.44■□□□□ 0.86
USP39-203ENST00000409470 ERFP50548 548 aa20.44■□□□□ 0.86
USP39-203ENST00000409470 SESN3P58005 492 aa20.44■□□□□ 0.86
USP39-203ENST00000409470 FASTKQ14296 549 aaKnown RBP20.44■□□□□ 0.86
USP39-203ENST00000409470 ATP13A5Q4VNC0 1218 aa20.44■□□□□ 0.86
USP39-203ENST00000409470 GK5Q6ZS86 529 aa20.44■□□□□ 0.86
USP39-203ENST00000409470 FBXW8Q8N3Y1 598 aa20.44■□□□□ 0.86
USP39-203ENST00000409470 EFCAB3Q8N7B9 438 aa20.44■□□□□ 0.86
USP39-203ENST00000409470 FRS2Q8WU20 508 aa20.44■□□□□ 0.86
USP39-203ENST00000409470 CCDC124Q96CT7 223 aaKnown RBP20.44■□□□□ 0.86
USP39-203ENST00000409470 PLEKHG4BQ96PX9 1271 aa20.44■□□□□ 0.86
USP39-203ENST00000409470 COPS8Q99627 209 aa20.44■□□□□ 0.86
USP39-203ENST00000409470 ABCG8Q9H221 673 aa20.44■□□□□ 0.86
USP39-203ENST00000409470 AKTIPQ9H8T0 292 aa20.44■□□□□ 0.86
USP39-203ENST00000409470 CERS4Q9HA82 394 aa20.44■□□□□ 0.86
USP39-203ENST00000409470 C15orf41Q9Y2V0 281 aa20.44■□□□□ 0.86
USP39-203ENST00000409470 PTGDR2Q9Y5Y4 395 aa20.44■□□□□ 0.86
USP39-203ENST00000409470 ANKRD12Q6UB98 2062 aa20.44■□□□□ 0.86
USP39-203ENST00000409470 AGAP14A8MT82 685 aa20.44■□□□□ 0.86
USP39-203ENST00000409470 LEFTY1O75610 366 aa20.44■□□□□ 0.86
USP39-203ENST00000409470 SPINT3P49223 89 aa20.44■□□□□ 0.86
USP39-203ENST00000409470 MAPRE2Q15555 327 aa20.44■□□□□ 0.86
USP39-203ENST00000409470 ARSIQ5FYB1 569 aa20.44■□□□□ 0.86
USP39-203ENST00000409470 TCEAL5Q5H9L2 206 aa20.44■□□□□ 0.86
USP39-203ENST00000409470 OR56A4Q8NGH8 313 aa20.44■□□□□ 0.86
USP39-203ENST00000409470 OSCP1Q8WVF1 389 aa20.44■□□□□ 0.86
USP39-203ENST00000409470 SAMD11Q96NU1 681 aa20.44■□□□□ 0.86
USP39-203ENST00000409470 SPATS2LQ9NUQ6 558 aaKnown RBP20.44■□□□□ 0.86
USP39-203ENST00000409470 PKD2L2Q9NZM6 624 aa20.44■□□□□ 0.86
USP39-203ENST00000409470 STOML1Q9UBI4 398 aa20.44■□□□□ 0.86
USP39-203ENST00000409470 A0A1B0GTL3 188 aa20.43■□□□□ 0.86
USP39-203ENST00000409470 RAD51BO15315 384 aa20.43■□□□□ 0.86
USP39-203ENST00000409470 ADH1CP00326 375 aa20.43■□□□□ 0.86
USP39-203ENST00000409470 CYP2A6P11509 494 aaPredicted RBP20.43■□□□□ 0.86
USP39-203ENST00000409470 VIPR2P41587 438 aa20.43■□□□□ 0.86
USP39-203ENST00000409470 STX1BP61266 288 aa20.43■□□□□ 0.86
USP39-203ENST00000409470 AGKQ53H12 422 aa20.43■□□□□ 0.86
USP39-203ENST00000409470 C9orf50Q5SZB4 431 aa20.43■□□□□ 0.86
USP39-203ENST00000409470 SBSNQ6UWP8 590 aa20.43■□□□□ 0.86
USP39-203ENST00000409470 HPS6Q86YV9 775 aa20.43■□□□□ 0.86
USP39-203ENST00000409470 FAM126AQ9BYI3 521 aaPredicted RBP20.43■□□□□ 0.86
USP39-203ENST00000409470 FBRSL1Q9HCM7 1045 aaKnown RBP20.43■□□□□ 0.86
USP39-203ENST00000409470 NDE1Q9NXR1 346 aa20.43■□□□□ 0.86
USP39-203ENST00000409470 CD84Q9UIB8 345 aa20.43■□□□□ 0.86
USP39-203ENST00000409470 BTRCQ9Y297 605 aa20.43■□□□□ 0.86
USP39-203ENST00000409470 WASF2Q9Y6W5 498 aa20.43■□□□□ 0.86
USP39-203ENST00000409470 LAMA3Q16787 3333 aa20.43■□□□□ 0.86
USP39-203ENST00000409470 SORBS2O94875 1100 aaKnown RBP20.43■□□□□ 0.86
USP39-203ENST00000409470 ESRRBO95718 433 aa20.43■□□□□ 0.86
USP39-203ENST00000409470 ENO3P13929 434 aaPredicted RBP20.43■□□□□ 0.86
USP39-203ENST00000409470 PTDSS1P48651 473 aaKnown RBP20.43■□□□□ 0.86
USP39-203ENST00000409470 TTLL9Q3SXZ7 439 aa20.43■□□□□ 0.86
USP39-203ENST00000409470 SWT1Q5T5J6 900 aaKnown RBP20.43■□□□□ 0.86
USP39-203ENST00000409470 GPRC6AQ5T6X5 926 aa20.43■□□□□ 0.86
USP39-203ENST00000409470 SYVN1Q86TM6 617 aa20.43■□□□□ 0.86
USP39-203ENST00000409470 ULK4Q96C45 1275 aa20.43■□□□□ 0.86
USP39-203ENST00000409470 RSPRY1Q96DX4 576 aa20.43■□□□□ 0.86
USP39-203ENST00000409470 NPAS2Q99743 824 aa20.43■□□□□ 0.86
USP39-203ENST00000409470 MTG2Q9H4K7 406 aa20.43■□□□□ 0.86
USP39-203ENST00000409470 CCDC167Q9P0B6 97 aa20.43■□□□□ 0.86
USP39-203ENST00000409470 STX18Q9P2W9 335 aaKnown RBP20.43■□□□□ 0.86
USP39-203ENST00000409470 IL36AQ9UHA7 158 aa20.43■□□□□ 0.86
USP39-203ENST00000409470 FBXO10Q9UK96 956 aa20.43■□□□□ 0.86
USP39-203ENST00000409470 PRPF19Q9UMS4 504 aaKnown RBP20.43■□□□□ 0.86
USP39-203ENST00000409470 ASB1Q9Y576 335 aa20.43■□□□□ 0.86
USP39-203ENST00000409470 TIMM22Q9Y584 194 aa20.43■□□□□ 0.86
USP39-203ENST00000409470 E2F3O00716 465 aa20.42■□□□□ 0.86
USP39-203ENST00000409470 CHEK2O96017 543 aa20.42■□□□□ 0.86
USP39-203ENST00000409470 LINC00032P0C843 101 aa20.42■□□□□ 0.86
USP39-203ENST00000409470 PRDX3P30048 256 aaKnown RBP20.42■□□□□ 0.86
USP39-203ENST00000409470 SLC34A1Q06495 639 aa20.42■□□□□ 0.86
USP39-203ENST00000409470 TCHHL1Q5QJ38 904 aaPredicted RBP20.42■□□□□ 0.86
USP39-203ENST00000409470 TUBGCP3Q96CW5 907 aa20.42■□□□□ 0.86
USP39-203ENST00000409470 SERPINI1Q99574 410 aa20.42■□□□□ 0.86
USP39-203ENST00000409470 APOL5Q9BWW9 433 aa20.42■□□□□ 0.86
USP39-203ENST00000409470 MRPL1Q9BYD6 325 aaKnown RBP20.42■□□□□ 0.86
USP39-203ENST00000409470 TUBB1Q9H4B7 451 aa20.42■□□□□ 0.86
USP39-203ENST00000409470 TNPO3Q9Y5L0 923 aaKnown RBP20.42■□□□□ 0.86
USP39-203ENST00000409470 CFLARO15519 480 aa20.41■□□□□ 0.86
USP39-203ENST00000409470 FFAR2O15552 330 aa20.41■□□□□ 0.86
USP39-203ENST00000409470 TBX10O75333 385 aa20.41■□□□□ 0.86
USP39-203ENST00000409470 CISD3P0C7P0 127 aa20.41■□□□□ 0.86
USP39-203ENST00000409470 ZNF30P17039 623 aa20.41■□□□□ 0.86
USP39-203ENST00000409470 XPAP23025 273 aaPredicted RBP20.41■□□□□ 0.86
USP39-203ENST00000409470 VIPR1P32241 457 aa20.41■□□□□ 0.86
USP39-203ENST00000409470 NRIP1P48552 1158 aa20.41■□□□□ 0.86
USP39-203ENST00000409470 MTTPP55157 894 aa20.41■□□□□ 0.86
USP39-203ENST00000409470 ERVK-21P61565 698 aa20.41■□□□□ 0.86
USP39-203ENST00000409470 STX5Q13190 355 aa20.41■□□□□ 0.86
USP39-203ENST00000409470 KIF19Q2TAC6 998 aa20.41■□□□□ 0.86
USP39-203ENST00000409470 MMEL1Q495T6 779 aa20.41■□□□□ 0.86
USP39-203ENST00000409470 BNC2Q6ZN30 1099 aaPredicted RBP20.41■□□□□ 0.86
USP39-203ENST00000409470 GPRIN3Q6ZVF9 776 aa20.41■□□□□ 0.86
USP39-203ENST00000409470 EFL1Q7Z2Z2 1120 aaKnown RBP20.41■□□□□ 0.86
USP39-203ENST00000409470 MYLK4Q86YV6 388 aaPredicted RBP20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms