RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 PCDH12Q9NPG4 1184 aa15.31■□□□□ 0.04
LIMS2-205ENST00000409455 SAGE1Q9NXZ1 904 aa15.31■□□□□ 0.04
LIMS2-205ENST00000409455 POLG2Q9UHN1 485 aa15.31■□□□□ 0.04
LIMS2-205ENST00000409455 PCDHB3Q9Y5E6 796 aa15.31■□□□□ 0.04
LIMS2-205ENST00000409455 I6L893 689 aaPredicted RBP15.3■□□□□ 0.04
LIMS2-205ENST00000409455 ARVCFO00192 962 aa15.3■□□□□ 0.04
LIMS2-205ENST00000409455 CDK14O94921 469 aa15.3■□□□□ 0.04
LIMS2-205ENST00000409455 INMTO95050 263 aa15.3■□□□□ 0.04
LIMS2-205ENST00000409455 GABARAPO95166 117 aa15.3■□□□□ 0.04
LIMS2-205ENST00000409455 NADKO95544 446 aaPredicted RBP15.3■□□□□ 0.04
LIMS2-205ENST00000409455 BMP4P12644 408 aa15.3■□□□□ 0.04
LIMS2-205ENST00000409455 TCF3P15923 654 aa15.3■□□□□ 0.04
LIMS2-205ENST00000409455 HRH2P25021 359 aa15.3■□□□□ 0.04
LIMS2-205ENST00000409455 PIGFQ07326 219 aa15.3■□□□□ 0.04
LIMS2-205ENST00000409455 SLC14A2Q15849 920 aa15.3■□□□□ 0.04
LIMS2-205ENST00000409455 MEP1AQ16819 746 aa15.3■□□□□ 0.04
LIMS2-205ENST00000409455 DPY19L1Q2PZI1 675 aa15.3■□□□□ 0.04
LIMS2-205ENST00000409455 TIGD2Q4W5G0 525 aa15.3■□□□□ 0.04
LIMS2-205ENST00000409455 ZNF789Q5FWF6 425 aa15.3■□□□□ 0.04
LIMS2-205ENST00000409455 GPR158Q5T848 1215 aa15.3■□□□□ 0.04
LIMS2-205ENST00000409455 IL31Q6EBC2 164 aa15.3■□□□□ 0.04
LIMS2-205ENST00000409455 RTN4RL1Q86UN2 441 aaPredicted RBP15.3■□□□□ 0.04
LIMS2-205ENST00000409455 AKAP14Q86UN6 197 aa15.3■□□□□ 0.04
LIMS2-205ENST00000409455 RIMKLAQ8IXN7 391 aa15.3■□□□□ 0.04
LIMS2-205ENST00000409455 TNIP3Q96KP6 325 aa15.3■□□□□ 0.04
LIMS2-205ENST00000409455 SENP8Q96LD8 212 aa15.3■□□□□ 0.04
LIMS2-205ENST00000409455 DUSP16Q9BY84 665 aa15.3■□□□□ 0.04
LIMS2-205ENST00000409455 CCDC90BQ9GZT6 254 aa15.3■□□□□ 0.04
LIMS2-205ENST00000409455 PIF1Q9H611 641 aa15.3■□□□□ 0.04
LIMS2-205ENST00000409455 WDR6Q9NNW5 1121 aaKnown RBP15.3■□□□□ 0.04
LIMS2-205ENST00000409455 SLC52A3Q9NQ40 469 aa15.3■□□□□ 0.04
LIMS2-205ENST00000409455 FAM118AQ9NWS6 357 aa15.3■□□□□ 0.04
LIMS2-205ENST00000409455 SUN2Q9UH99 717 aa15.3■□□□□ 0.04
LIMS2-205ENST00000409455 MAGEL2Q9UJ55 1249 aa15.3■□□□□ 0.04
LIMS2-205ENST00000409455 FBXW11Q9UKB1 542 aa15.3■□□□□ 0.04
LIMS2-205ENST00000409455 CCDC154A6NI56 674 aa15.3■□□□□ 0.04
LIMS2-205ENST00000409455 UPK1AO00322 258 aa15.3■□□□□ 0.04
LIMS2-205ENST00000409455 VPS4BO75351 444 aa15.3■□□□□ 0.04
LIMS2-205ENST00000409455 EEDO75530 441 aaKnown RBP15.3■□□□□ 0.04
LIMS2-205ENST00000409455 NTRK1P04629 796 aa15.3■□□□□ 0.04
LIMS2-205ENST00000409455 LINC00032P0C843 101 aa15.3■□□□□ 0.04
LIMS2-205ENST00000409455 TCEA1P23193 301 aaKnown RBP15.3■□□□□ 0.04
LIMS2-205ENST00000409455 GP2P55259 537 aaKnown RBP15.3■□□□□ 0.04
LIMS2-205ENST00000409455 FAM98BQ52LJ0 330 aaKnown RBP15.3■□□□□ 0.04
LIMS2-205ENST00000409455 KANK2Q63ZY3 851 aa15.3■□□□□ 0.04
LIMS2-205ENST00000409455 UGT3A1Q6NUS8 523 aa15.3■□□□□ 0.04
LIMS2-205ENST00000409455 HFE2Q6ZVN8 426 aa15.3■□□□□ 0.04
LIMS2-205ENST00000409455 ISCA2Q86U28 154 aa15.3■□□□□ 0.04
LIMS2-205ENST00000409455 KIAA2013Q8IYS2 634 aa15.3■□□□□ 0.04
LIMS2-205ENST00000409455 NAT16Q8N8M0 369 aa15.3■□□□□ 0.04
LIMS2-205ENST00000409455 DPF3Q92784 378 aa15.3■□□□□ 0.04
LIMS2-205ENST00000409455 GLMNQ92990 594 aa15.3■□□□□ 0.04
LIMS2-205ENST00000409455 FCRL5Q96RD9 977 aa15.3■□□□□ 0.04
LIMS2-205ENST00000409455 SCUBE2Q9NQ36 999 aa15.3■□□□□ 0.04
LIMS2-205ENST00000409455 ENTPD7Q9NQZ7 604 aa15.3■□□□□ 0.04
LIMS2-205ENST00000409455 THG1LQ9NWX6 298 aaKnown RBP15.3■□□□□ 0.04
LIMS2-205ENST00000409455 LEF1Q9UJU2 399 aaPredicted RBP15.3■□□□□ 0.04
LIMS2-205ENST00000409455 TIMM13Q9Y5L4 95 aaPredicted RBP15.3■□□□□ 0.04
LIMS2-205ENST00000409455 MAGED1Q9Y5V3 778 aaPredicted RBP15.3■□□□□ 0.04
LIMS2-205ENST00000409455 FNDC1Q4ZHG4 1894 aaPredicted RBP15.29■□□□□ 0.04
LIMS2-205ENST00000409455 ZNF99A8MXY4 864 aaPredicted RBP15.29■□□□□ 0.04
LIMS2-205ENST00000409455 G3V2T6 193 aa15.29■□□□□ 0.04
LIMS2-205ENST00000409455 CAPN15O75808 1086 aa15.29■□□□□ 0.04
LIMS2-205ENST00000409455 PRSS23O95084 383 aa15.29■□□□□ 0.04
LIMS2-205ENST00000409455 RAP2AP10114 183 aa15.29■□□□□ 0.04
LIMS2-205ENST00000409455 NPR3P17342 541 aa15.29■□□□□ 0.04
LIMS2-205ENST00000409455 WARSP23381 471 aaKnown RBP15.29■□□□□ 0.04
LIMS2-205ENST00000409455 GEMP55040 296 aa15.29■□□□□ 0.04
LIMS2-205ENST00000409455 FOXA1P55317 472 aa15.29■□□□□ 0.04
LIMS2-205ENST00000409455 UPP1Q16831 310 aa15.29■□□□□ 0.04
LIMS2-205ENST00000409455 PAGE3Q5JUK9 113 aa15.29■□□□□ 0.04
LIMS2-205ENST00000409455 GLYATQ6IB77 296 aa15.29■□□□□ 0.04
LIMS2-205ENST00000409455 B3GALNT2Q8NCR0 500 aa15.29■□□□□ 0.04
LIMS2-205ENST00000409455 TSGA13Q96PP4 275 aa15.29■□□□□ 0.04
LIMS2-205ENST00000409455 LRRC3Q9BY71 257 aa15.29■□□□□ 0.04
LIMS2-205ENST00000409455 PARVBQ9HBI1 364 aa15.29■□□□□ 0.04
LIMS2-205ENST00000409455 CPNE5Q9HCH3 593 aa15.29■□□□□ 0.04
LIMS2-205ENST00000409455 NECTIN3Q9NQS3 549 aa15.29■□□□□ 0.04
LIMS2-205ENST00000409455 POLE4Q9NR33 117 aa15.29■□□□□ 0.04
LIMS2-205ENST00000409455 DDIT4Q9NX09 232 aa15.29■□□□□ 0.04
LIMS2-205ENST00000409455 OR12D3Q9UGF7 316 aa15.29■□□□□ 0.04
LIMS2-205ENST00000409455 BTRCQ9Y297 605 aa15.29■□□□□ 0.04
LIMS2-205ENST00000409455 NOX1Q9Y5S8 564 aa15.29■□□□□ 0.04
LIMS2-205ENST00000409455 DFFAO00273 331 aa15.28■□□□□ 0.04
LIMS2-205ENST00000409455 GABRDO14764 452 aa15.28■□□□□ 0.04
LIMS2-205ENST00000409455 SLC26A3P40879 764 aa15.28■□□□□ 0.04
LIMS2-205ENST00000409455 MTHFRP42898 656 aa15.28■□□□□ 0.04
LIMS2-205ENST00000409455 KCNC1P48547 511 aa15.28■□□□□ 0.04
LIMS2-205ENST00000409455 DIO3P55073 304 aa15.28■□□□□ 0.04
LIMS2-205ENST00000409455 ZNF33AQ06730 810 aa15.28■□□□□ 0.04
LIMS2-205ENST00000409455 ARMC8Q8IUR7 673 aa15.28■□□□□ 0.04
LIMS2-205ENST00000409455 PTGR2Q8N8N7 351 aaPredicted RBP15.28■□□□□ 0.04
LIMS2-205ENST00000409455 ATP6V0D2Q8N8Y2 350 aa15.28■□□□□ 0.04
LIMS2-205ENST00000409455 NDNFQ8TB73 568 aa15.28■□□□□ 0.04
LIMS2-205ENST00000409455 ITFG1Q8TB96 612 aa15.28■□□□□ 0.04
LIMS2-205ENST00000409455 MOV10Q9HCE1 1003 aaKnown RBP15.28■□□□□ 0.04
LIMS2-205ENST00000409455 KLQ9UEF7 1012 aa15.28■□□□□ 0.04
LIMS2-205ENST00000409455 USP22Q9UPT9 525 aa15.28■□□□□ 0.04
LIMS2-205ENST00000409455 GPR45Q9Y5Y3 372 aa15.28■□□□□ 0.04
LIMS2-205ENST00000409455 ASPDHA6ND91 283 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms