RNA–Protein interactions for RNA: ENST00000409326.6

PTCD3-202, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 522 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-202ENST00000409326 SGF29Q96ES7 293 aa20■□□□□ 0.79
PTCD3-202ENST00000409326 STAMBPL1Q96FJ0 436 aa20■□□□□ 0.79
PTCD3-202ENST00000409326 TRIM56Q9BRZ2 755 aaKnown RBP20■□□□□ 0.79
PTCD3-202ENST00000409326 DPH5Q9H2P9 285 aa20■□□□□ 0.79
PTCD3-202ENST00000409326 KLC4Q9NSK0 619 aa20■□□□□ 0.79
PTCD3-202ENST00000409326 CATSPERZQ9NTU4 200 aa20■□□□□ 0.79
PTCD3-202ENST00000409326 SLC23A2Q9UGH3 650 aa20■□□□□ 0.79
PTCD3-202ENST00000409326 PCDHGA1Q9Y5H4 931 aa20■□□□□ 0.79
PTCD3-202ENST00000409326 MAD1L1Q9Y6D9 718 aa20■□□□□ 0.79
PTCD3-202ENST00000409326 DNMT3AQ9Y6K1 912 aaPredicted RBP20■□□□□ 0.79
PTCD3-202ENST00000409326 RPS6KL1Q9Y6S9 549 aa20■□□□□ 0.79
PTCD3-202ENST00000409326 PRR19A6NJB7 356 aa19.99■□□□□ 0.79
PTCD3-202ENST00000409326 SGTAO43765 313 aa19.99■□□□□ 0.79
PTCD3-202ENST00000409326 NOBOXO60393 691 aa19.99■□□□□ 0.79
PTCD3-202ENST00000409326 USP1O94782 785 aa19.99■□□□□ 0.79
PTCD3-202ENST00000409326 DKK1O94907 266 aa19.99■□□□□ 0.79
PTCD3-202ENST00000409326 VAPBO95292 243 aa19.99■□□□□ 0.79
PTCD3-202ENST00000409326 MYF5P13349 255 aa19.99■□□□□ 0.79
PTCD3-202ENST00000409326 PRLHRP49683 370 aa19.99■□□□□ 0.79
PTCD3-202ENST00000409326 SEMA3AQ14563 771 aa19.99■□□□□ 0.79
PTCD3-202ENST00000409326 HIF1AQ16665 826 aa19.99■□□□□ 0.79
PTCD3-202ENST00000409326 ANKRD20A4Q4UJ75 823 aa19.99■□□□□ 0.79
PTCD3-202ENST00000409326 MSS51Q4VC12 460 aa19.99■□□□□ 0.79
PTCD3-202ENST00000409326 AARS2Q5JTZ9 985 aaKnown RBP19.99■□□□□ 0.79
PTCD3-202ENST00000409326 PACS1Q6VY07 963 aa19.99■□□□□ 0.79
PTCD3-202ENST00000409326 MMGT1Q8N4V1 131 aa19.99■□□□□ 0.79
PTCD3-202ENST00000409326 ZDHHC1Q8WTX9 485 aa19.99■□□□□ 0.79
PTCD3-202ENST00000409326 TTC1Q99614 292 aa19.99■□□□□ 0.79
PTCD3-202ENST00000409326 GULP1Q9UBP9 304 aa19.99■□□□□ 0.79
PTCD3-202ENST00000409326 APOBEC2Q9Y235 224 aaKnown RBP19.99■□□□□ 0.79
PTCD3-202ENST00000409326 PTPRBP23467 1997 aa19.99■□□□□ 0.79
PTCD3-202ENST00000409326 EME2A4GXA9 379 aaPredicted RBP19.98■□□□□ 0.79
PTCD3-202ENST00000409326 CD3EAPO15446 510 aaKnown RBP19.98■□□□□ 0.79
PTCD3-202ENST00000409326 KCNJ13O60928 360 aa19.98■□□□□ 0.79
PTCD3-202ENST00000409326 VCLP18206 1134 aa19.98■□□□□ 0.79
PTCD3-202ENST00000409326 PGAM1P18669 254 aa19.98■□□□□ 0.79
PTCD3-202ENST00000409326 PPARGP37231 505 aaPredicted RBP19.98■□□□□ 0.79
PTCD3-202ENST00000409326 NSG1P42857 185 aa19.98■□□□□ 0.79
PTCD3-202ENST00000409326 ARCN1P48444 511 aaKnown RBP19.98■□□□□ 0.79
PTCD3-202ENST00000409326 ARL4CP56559 192 aa19.98■□□□□ 0.79
PTCD3-202ENST00000409326 DMPKQ09013 629 aa19.98■□□□□ 0.79
PTCD3-202ENST00000409326 ILKQ13418 452 aa19.98■□□□□ 0.79
PTCD3-202ENST00000409326 BBS9Q3SYG4 887 aa19.98■□□□□ 0.79
PTCD3-202ENST00000409326 SLCO6A1Q86UG4 719 aa19.98■□□□□ 0.79
PTCD3-202ENST00000409326 AMZ2Q86W34 360 aa19.98■□□□□ 0.79
PTCD3-202ENST00000409326 C17orf82Q86X59 251 aaPredicted RBP19.98■□□□□ 0.79
PTCD3-202ENST00000409326 SFTPA2Q8IWL1 248 aa19.98■□□□□ 0.79
PTCD3-202ENST00000409326 NAGSQ8N159 534 aa19.98■□□□□ 0.79
PTCD3-202ENST00000409326 BEND7Q8N7W2 519 aaPredicted RBP19.98■□□□□ 0.79
PTCD3-202ENST00000409326 CEP112Q8N8E3 955 aa19.98■□□□□ 0.79
PTCD3-202ENST00000409326 NAT14Q8WUY8 206 aa19.98■□□□□ 0.79
PTCD3-202ENST00000409326 LINC00615Q96LM1 132 aaPredicted RBP19.98■□□□□ 0.79
PTCD3-202ENST00000409326 PWWP2AQ96N64 755 aa19.98■□□□□ 0.79
PTCD3-202ENST00000409326 FCRL3Q96P31 734 aaPredicted RBP19.98■□□□□ 0.79
PTCD3-202ENST00000409326 EBNA1BP2Q99848 306 aaKnown RBP19.98■□□□□ 0.79
PTCD3-202ENST00000409326 NAT9Q9BTE0 207 aa19.98■□□□□ 0.79
PTCD3-202ENST00000409326 LRRC1Q9BTT6 524 aa19.98■□□□□ 0.79
PTCD3-202ENST00000409326 GRHL1Q9NZI5 618 aa19.98■□□□□ 0.79
PTCD3-202ENST00000409326 MARCH4Q9P2E8 410 aaPredicted RBP19.98■□□□□ 0.79
PTCD3-202ENST00000409326 TBC1D29Q9UFV1 150 aa19.98■□□□□ 0.79
PTCD3-202ENST00000409326 DNAJC16Q9Y2G8 782 aa19.98■□□□□ 0.79
PTCD3-202ENST00000409326 ZCWPW2A0A1B0GU75 182 aa19.97■□□□□ 0.79
PTCD3-202ENST00000409326 KLHL33A6NCF5 533 aa19.97■□□□□ 0.79
PTCD3-202ENST00000409326 A6NCN8 305 aa19.97■□□□□ 0.79
PTCD3-202ENST00000409326 BANF1O75531 89 aa19.97■□□□□ 0.79
PTCD3-202ENST00000409326 RFPL3O75679 317 aa19.97■□□□□ 0.79
PTCD3-202ENST00000409326 POP7O75817 140 aaKnown RBP19.97■□□□□ 0.79
PTCD3-202ENST00000409326 AP2A2O94973 939 aa19.97■□□□□ 0.79
PTCD3-202ENST00000409326 TTPAP49638 278 aa19.97■□□□□ 0.79
PTCD3-202ENST00000409326 C14orf28Q4W4Y0 310 aa19.97■□□□□ 0.79
PTCD3-202ENST00000409326 N4BP2L1Q5TBK1 243 aaPredicted RBP19.97■□□□□ 0.79
PTCD3-202ENST00000409326 GUSBP11Q6P575 273 aa19.97■□□□□ 0.79
PTCD3-202ENST00000409326 PNPLA1Q8N8W4 532 aa19.97■□□□□ 0.79
PTCD3-202ENST00000409326 NOA1Q8NC60 698 aaKnown RBP19.97■□□□□ 0.79
PTCD3-202ENST00000409326 NAT6Q93015 286 aa19.97■□□□□ 0.79
PTCD3-202ENST00000409326 LRRC39Q96DD0 335 aa19.97■□□□□ 0.79
PTCD3-202ENST00000409326 OSGEPL1Q9H4B0 414 aa19.97■□□□□ 0.79
PTCD3-202ENST00000409326 PADI4Q9UM07 663 aa19.97■□□□□ 0.79
PTCD3-202ENST00000409326 QSOX1O00391 747 aa19.96■□□□□ 0.79
PTCD3-202ENST00000409326 TTC4O95801 387 aa19.96■□□□□ 0.79
PTCD3-202ENST00000409326 EML2O95834 649 aa19.96■□□□□ 0.79
PTCD3-202ENST00000409326 POLBP06746 335 aa19.96■□□□□ 0.79
PTCD3-202ENST00000409326 GP1BAP07359 652 aa19.96■□□□□ 0.79
PTCD3-202ENST00000409326 DRG2P55039 364 aaKnown RBP19.96■□□□□ 0.79
PTCD3-202ENST00000409326 SLC7A5Q01650 507 aa19.96■□□□□ 0.79
PTCD3-202ENST00000409326 CBLBQ13191 982 aa19.96■□□□□ 0.79
PTCD3-202ENST00000409326 HLTFQ14527 1009 aaKnown RBP eCLIP19.96■□□□□ 0.79
PTCD3-202ENST00000409326 MRNIPQ6NTE8 343 aa19.96■□□□□ 0.79
PTCD3-202ENST00000409326 ERMP1Q7Z2K6 904 aa19.96■□□□□ 0.79
PTCD3-202ENST00000409326 EFL1Q7Z2Z2 1120 aaKnown RBP19.96■□□□□ 0.79
PTCD3-202ENST00000409326 CCNJLQ8IV13 435 aa19.96■□□□□ 0.79
PTCD3-202ENST00000409326 CLDN19Q8N6F1 224 aa19.96■□□□□ 0.79
PTCD3-202ENST00000409326 OR6C4Q8NGE1 309 aa19.96■□□□□ 0.79
PTCD3-202ENST00000409326 GPR150Q8NGU9 434 aa19.96■□□□□ 0.79
PTCD3-202ENST00000409326 IFI44Q8TCB0 444 aa19.96■□□□□ 0.79
PTCD3-202ENST00000409326 PATE1Q8WXA2 126 aa19.96■□□□□ 0.79
PTCD3-202ENST00000409326 FAM169AQ9Y6X4 670 aa19.96■□□□□ 0.79
PTCD3-202ENST00000409326 CPED1A4D0V7 1026 aa19.95■□□□□ 0.78
PTCD3-202ENST00000409326 MGAT4DA6NG13 374 aa19.95■□□□□ 0.78
PTCD3-202ENST00000409326 GOLGA8KD6RF30 607 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms