RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 USP9YO00507 2555 aaPredicted RBP7.63□□□□□ -1.19
LSM5-202ENST00000409292 ICE1Q9Y2F5 2266 aa7.62□□□□□ -1.19
LSM5-202ENST00000409292 LGALS16A8MUM7 142 aa7.62□□□□□ -1.19
LSM5-202ENST00000409292 VEGFDO43915 354 aa7.62□□□□□ -1.19
LSM5-202ENST00000409292 DNAJC6O75061 913 aa7.62□□□□□ -1.19
LSM5-202ENST00000409292 CLDN7O95471 211 aa7.62□□□□□ -1.19
LSM5-202ENST00000409292 SOD1P00441 154 aa7.62□□□□□ -1.19
LSM5-202ENST00000409292 FTLP02792 175 aaPredicted RBP7.62□□□□□ -1.19
LSM5-202ENST00000409292 GZMAP12544 262 aa7.62□□□□□ -1.19
LSM5-202ENST00000409292 SPINT3P49223 89 aa7.62□□□□□ -1.19
LSM5-202ENST00000409292 CCL11P51671 97 aa7.62□□□□□ -1.19
LSM5-202ENST00000409292 RRADP55042 308 aa7.62□□□□□ -1.19
LSM5-202ENST00000409292 OGDHQ02218 1023 aa7.62□□□□□ -1.19
LSM5-202ENST00000409292 TUBB3Q13509 450 aa7.62□□□□□ -1.19
LSM5-202ENST00000409292 ESPL1Q14674 2120 aa7.62□□□□□ -1.19
LSM5-202ENST00000409292 PLCL1Q15111 1095 aa7.62□□□□□ -1.19
LSM5-202ENST00000409292 ASIC2Q16515 512 aa7.62□□□□□ -1.19
LSM5-202ENST00000409292 IFI16Q16666 785 aaKnown RBP7.62□□□□□ -1.19
LSM5-202ENST00000409292 UGT8Q16880 541 aa7.62□□□□□ -1.19
LSM5-202ENST00000409292 FILIP1LQ4L180 1135 aa7.62□□□□□ -1.19
LSM5-202ENST00000409292 OXLD1Q5BKU9 147 aa7.62□□□□□ -1.19
LSM5-202ENST00000409292 ZFYVE27Q5T4F4 411 aa7.62□□□□□ -1.19
LSM5-202ENST00000409292 SASS6Q6UVJ0 657 aa7.62□□□□□ -1.19
LSM5-202ENST00000409292 MAMDC2Q7Z304 686 aaPredicted RBP7.62□□□□□ -1.19
LSM5-202ENST00000409292 PRSS42Q7Z5A4 293 aa7.62□□□□□ -1.19
LSM5-202ENST00000409292 KMT5CQ86Y97 462 aa7.62□□□□□ -1.19
LSM5-202ENST00000409292 MAP7D3Q8IWC1 876 aa7.62□□□□□ -1.19
LSM5-202ENST00000409292 PGBD5Q8N414 524 aa7.62□□□□□ -1.19
LSM5-202ENST00000409292 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.62□□□□□ -1.19
LSM5-202ENST00000409292 OR8K5Q8NH50 307 aa7.62□□□□□ -1.19
LSM5-202ENST00000409292 CT55Q8WUE5 264 aa7.62□□□□□ -1.19
LSM5-202ENST00000409292 TEKT4Q8WW24 435 aa7.62□□□□□ -1.19
LSM5-202ENST00000409292 CSPG4P5Q96PW8 444 aa7.62□□□□□ -1.19
LSM5-202ENST00000409292 CD180Q99467 661 aa7.62□□□□□ -1.19
LSM5-202ENST00000409292 TIMM29Q9BSF4 260 aa7.62□□□□□ -1.19
LSM5-202ENST00000409292 TDRD1Q9BXT4 1180 aaKnown RBP7.62□□□□□ -1.19
LSM5-202ENST00000409292 ZCCHC2Q9C0B9 1178 aaKnown RBP7.62□□□□□ -1.19
LSM5-202ENST00000409292 XPO4Q9C0E2 1151 aaKnown RBP7.62□□□□□ -1.19
LSM5-202ENST00000409292 SLC7A5P2Q9GIP4 190 aa7.62□□□□□ -1.19
LSM5-202ENST00000409292 BRD8Q9H0E9 1235 aa7.62□□□□□ -1.19
LSM5-202ENST00000409292 ACTL8Q9H568 366 aa7.62□□□□□ -1.19
LSM5-202ENST00000409292 RBM22Q9NW64 420 aaKnown RBP eCLIP7.62□□□□□ -1.19
LSM5-202ENST00000409292 TMEM63CQ9P1W3 806 aa7.62□□□□□ -1.19
LSM5-202ENST00000409292 MYO1AQ9UBC5 1043 aa7.62□□□□□ -1.19
LSM5-202ENST00000409292 IP6K2Q9UHH9 426 aa7.62□□□□□ -1.19
LSM5-202ENST00000409292 CHKBQ9Y259 395 aa7.62□□□□□ -1.19
LSM5-202ENST00000409292 FARSAQ9Y285 508 aaKnown RBP7.62□□□□□ -1.19
LSM5-202ENST00000409292 SIK3Q9Y2K2 1263 aa7.62□□□□□ -1.19
LSM5-202ENST00000409292 ST14Q9Y5Y6 855 aa7.62□□□□□ -1.19
LSM5-202ENST00000409292 MYO9AB2RTY4 2548 aa7.62□□□□□ -1.19
LSM5-202ENST00000409292 UBA6A0AVT1 1052 aaPredicted RBP7.61□□□□□ -1.19
LSM5-202ENST00000409292 A1L4Q6 167 aa7.61□□□□□ -1.19
LSM5-202ENST00000409292 GOLGA6L3A6NEY3 463 aa7.61□□□□□ -1.19
LSM5-202ENST00000409292 ARGFXA6NJG6 315 aa7.61□□□□□ -1.19
LSM5-202ENST00000409292 ANKRD66B4E2M5 251 aa7.61□□□□□ -1.19
LSM5-202ENST00000409292 EPHB6O15197 1021 aa7.61□□□□□ -1.19
LSM5-202ENST00000409292 MATN3O15232 486 aa7.61□□□□□ -1.19
LSM5-202ENST00000409292 FZD6O60353 706 aa7.61□□□□□ -1.19
LSM5-202ENST00000409292 CPNE3O75131 537 aaKnown RBP7.61□□□□□ -1.19
LSM5-202ENST00000409292 CDK14O94921 469 aa7.61□□□□□ -1.19
LSM5-202ENST00000409292 EML2O95834 649 aa7.61□□□□□ -1.19
LSM5-202ENST00000409292 IGHEP01854 428 aa7.61□□□□□ -1.19
LSM5-202ENST00000409292 ALPPP05187 535 aa7.61□□□□□ -1.19
LSM5-202ENST00000409292 PDHA1P08559 390 aa7.61□□□□□ -1.19
LSM5-202ENST00000409292 ZNF28P17035 718 aa7.61□□□□□ -1.19
LSM5-202ENST00000409292 ZNF7P17097 686 aaPredicted RBP7.61□□□□□ -1.19
LSM5-202ENST00000409292 NELFEP18615 380 aaKnown RBP7.61□□□□□ -1.19
LSM5-202ENST00000409292 CCNCP24863 283 aa7.61□□□□□ -1.19
LSM5-202ENST00000409292 PTPN4P29074 926 aa7.61□□□□□ -1.19
LSM5-202ENST00000409292 MAP2K3P46734 347 aa7.61□□□□□ -1.19
LSM5-202ENST00000409292 CAPZBP47756 277 aa7.61□□□□□ -1.19
LSM5-202ENST00000409292 LEPRP48357 1165 aaKnown RBP7.61□□□□□ -1.19
LSM5-202ENST00000409292 GFERP55789 205 aa7.61□□□□□ -1.19
LSM5-202ENST00000409292 GSDMDP57764 484 aa7.61□□□□□ -1.19
LSM5-202ENST00000409292 UBE2IP63279 158 aaKnown RBP7.61□□□□□ -1.19
LSM5-202ENST00000409292 MYL5Q02045 173 aa7.61□□□□□ -1.19
LSM5-202ENST00000409292 INPP5JQ15735 1006 aaPredicted RBP7.61□□□□□ -1.19
LSM5-202ENST00000409292 SEPT7Q16181 437 aaKnown RBP7.61□□□□□ -1.19
LSM5-202ENST00000409292 SMTNL2Q2TAL5 461 aa7.61□□□□□ -1.19
LSM5-202ENST00000409292 DNTTIP2Q5QJE6 756 aaKnown RBP7.61□□□□□ -1.19
LSM5-202ENST00000409292 HENMT1Q5T8I9 393 aaKnown RBP7.61□□□□□ -1.19
LSM5-202ENST00000409292 CDKAL1Q5VV42 579 aa7.61□□□□□ -1.19
LSM5-202ENST00000409292 CRTC3Q6UUV7 619 aa7.61□□□□□ -1.19
LSM5-202ENST00000409292 FAM92BQ6ZTR7 304 aa7.61□□□□□ -1.19
LSM5-202ENST00000409292 POLNQ7Z5Q5 900 aa7.61□□□□□ -1.19
LSM5-202ENST00000409292 TMEM126BQ8IUX1 230 aa7.61□□□□□ -1.19
LSM5-202ENST00000409292 TRAM1L1Q8N609 369 aa7.61□□□□□ -1.19
LSM5-202ENST00000409292 TEX26Q8N6G2 289 aa7.61□□□□□ -1.19
LSM5-202ENST00000409292 BEND7Q8N7W2 519 aaPredicted RBP7.61□□□□□ -1.19
LSM5-202ENST00000409292 CCNYQ8ND76 341 aa7.61□□□□□ -1.19
LSM5-202ENST00000409292 GDAP1Q8TB36 358 aa7.61□□□□□ -1.19
LSM5-202ENST00000409292 BRSK1Q8TDC3 778 aa7.61□□□□□ -1.19
LSM5-202ENST00000409292 KLHL6Q8WZ60 621 aa7.61□□□□□ -1.19
LSM5-202ENST00000409292 TM9SF4Q92544 642 aa7.61□□□□□ -1.19
LSM5-202ENST00000409292 MR1Q95460 341 aa7.61□□□□□ -1.19
LSM5-202ENST00000409292 C5orf34Q96MH7 638 aa7.61□□□□□ -1.19
LSM5-202ENST00000409292 ERGIC2Q96RQ1 377 aa7.61□□□□□ -1.19
LSM5-202ENST00000409292 LYSMD1Q96S90 227 aa7.61□□□□□ -1.19
LSM5-202ENST00000409292 PEBP4Q96S96 227 aa7.61□□□□□ -1.19
LSM5-202ENST00000409292 AGAP2Q99490 1192 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms