RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 COL6A1P12109 1028 aa17.5■□□□□ 0.39
SMPD4-202ENST00000409031 PKMP14618 531 aaKnown RBP17.5■□□□□ 0.39
SMPD4-202ENST00000409031 STARD3Q14849 445 aa17.5■□□□□ 0.39
SMPD4-202ENST00000409031 TEX47Q8TBZ9 253 aa17.5■□□□□ 0.39
SMPD4-202ENST00000409031 RASAL1O95294 804 aa17.5■□□□□ 0.39
SMPD4-202ENST00000409031 CTC1Q2NKJ3 1217 aa17.5■□□□□ 0.39
SMPD4-202ENST00000409031 PLEKHG7Q6ZR37 379 aa17.5■□□□□ 0.39
SMPD4-202ENST00000409031 VN1R5Q7Z5H4 357 aa17.5■□□□□ 0.39
SMPD4-202ENST00000409031 ATL1Q8WXF7 558 aa17.5■□□□□ 0.39
SMPD4-202ENST00000409031 SENP8Q96LD8 212 aa17.5■□□□□ 0.39
SMPD4-202ENST00000409031 CNTN3Q9P232 1028 aa17.5■□□□□ 0.39
SMPD4-202ENST00000409031 NFKBIL1Q9UBC1 381 aaPredicted RBP17.5■□□□□ 0.39
SMPD4-202ENST00000409031 HSPB11Q9Y547 144 aa17.5■□□□□ 0.39
SMPD4-202ENST00000409031 PRG2P13727 222 aa17.5■□□□□ 0.39
SMPD4-202ENST00000409031 MAXP61244 160 aa17.5■□□□□ 0.39
SMPD4-202ENST00000409031 VBP1P61758 197 aa17.5■□□□□ 0.39
SMPD4-202ENST00000409031 SNAPC1Q16533 368 aa17.5■□□□□ 0.39
SMPD4-202ENST00000409031 CYP2A13Q16696 494 aa17.5■□□□□ 0.39
SMPD4-202ENST00000409031 PAN2Q504Q3 1202 aaKnown RBP17.5■□□□□ 0.39
SMPD4-202ENST00000409031 BIRC7Q96CA5 298 aa17.5■□□□□ 0.39
SMPD4-202ENST00000409031 BORCS6Q96GS4 357 aa17.5■□□□□ 0.39
SMPD4-202ENST00000409031 MLXQ9UH92 298 aa17.5■□□□□ 0.39
SMPD4-202ENST00000409031 KCNH4Q9UQ05 1017 aa17.5■□□□□ 0.39
SMPD4-202ENST00000409031 RPP40O75818 363 aaKnown RBP17.49■□□□□ 0.39
SMPD4-202ENST00000409031 CATP04040 527 aaKnown RBP17.49■□□□□ 0.39
SMPD4-202ENST00000409031 CCNCP24863 283 aa17.49■□□□□ 0.39
SMPD4-202ENST00000409031 BRMS1LQ5PSV4 323 aa17.49■□□□□ 0.39
SMPD4-202ENST00000409031 C6orf141Q5SZD1 244 aa17.49■□□□□ 0.39
SMPD4-202ENST00000409031 ARMC12Q5T9G4 340 aa17.49■□□□□ 0.39
SMPD4-202ENST00000409031 FBXL18Q96ME1 805 aa17.49■□□□□ 0.39
SMPD4-202ENST00000409031 HNRNPABQ99729 332 aaKnown RBP17.49■□□□□ 0.39
SMPD4-202ENST00000409031 ZYG11BQ9C0D3 744 aa17.49■□□□□ 0.39
SMPD4-202ENST00000409031 BCAS3Q9H6U6 928 aa17.49■□□□□ 0.39
SMPD4-202ENST00000409031 ZNF490Q9ULM2 529 aaPredicted RBP17.49■□□□□ 0.39
SMPD4-202ENST00000409031 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.49■□□□□ 0.39
SMPD4-202ENST00000409031 PRAMEF1O95521 474 aa17.49■□□□□ 0.39
SMPD4-202ENST00000409031 MBL2P11226 248 aaPredicted RBP17.49■□□□□ 0.39
SMPD4-202ENST00000409031 ANXA8P13928 327 aa17.49■□□□□ 0.39
SMPD4-202ENST00000409031 HUNKP57058 714 aa17.49■□□□□ 0.39
SMPD4-202ENST00000409031 CHST15Q7LFX5 561 aaPredicted RBP17.49■□□□□ 0.39
SMPD4-202ENST00000409031 CLHC1Q8NHS4 586 aa17.49■□□□□ 0.39
SMPD4-202ENST00000409031 DDX1Q92499 740 aaKnown RBP17.49■□□□□ 0.39
SMPD4-202ENST00000409031 CGREF1Q99674 301 aa17.49■□□□□ 0.39
SMPD4-202ENST00000409031 ANKRD60Q9BZ19 345 aa17.49■□□□□ 0.39
SMPD4-202ENST00000409031 MCUBQ9NWR8 336 aa17.49■□□□□ 0.39
SMPD4-202ENST00000409031 ST3GAL5Q9UNP4 418 aa17.49■□□□□ 0.39
SMPD4-202ENST00000409031 IRAK3Q9Y616 596 aa17.49■□□□□ 0.39
SMPD4-202ENST00000409031 A0A1W2PP18 115 aa17.49■□□□□ 0.39
SMPD4-202ENST00000409031 SNNO75324 88 aaPredicted RBP17.49■□□□□ 0.39
SMPD4-202ENST00000409031 SH3BGRLO75368 114 aa17.49■□□□□ 0.39
SMPD4-202ENST00000409031 SERPINB7O75635 380 aa17.49■□□□□ 0.39
SMPD4-202ENST00000409031 BDNFP23560 247 aa17.49■□□□□ 0.39
SMPD4-202ENST00000409031 RXRBP28702 533 aa17.49■□□□□ 0.39
SMPD4-202ENST00000409031 FBXW4P57775 412 aa17.49■□□□□ 0.39
SMPD4-202ENST00000409031 HERVK_113P63132 956 aa17.49■□□□□ 0.39
SMPD4-202ENST00000409031 SLC25A11Q02978 314 aaKnown RBP17.49■□□□□ 0.39
SMPD4-202ENST00000409031 GPR153Q6NV75 609 aa17.49■□□□□ 0.39
SMPD4-202ENST00000409031 C11orf65Q8NCR3 313 aa17.49■□□□□ 0.39
SMPD4-202ENST00000409031 ERVK-6Q9BXR3 956 aa17.49■□□□□ 0.39
SMPD4-202ENST00000409031 ASB8Q9H765 288 aa17.49■□□□□ 0.39
SMPD4-202ENST00000409031 NPEPPSL1A6NEC2 478 aa17.49■□□□□ 0.39
SMPD4-202ENST00000409031 TMEM233B4DJY2 109 aa17.49■□□□□ 0.39
SMPD4-202ENST00000409031 SLC7A4O43246 635 aa17.49■□□□□ 0.39
SMPD4-202ENST00000409031 KHDRBS3O75525 346 aaKnown RBP17.49■□□□□ 0.39
SMPD4-202ENST00000409031 PGK1P00558 417 aa17.49■□□□□ 0.39
SMPD4-202ENST00000409031 MYF6P23409 242 aa17.49■□□□□ 0.39
SMPD4-202ENST00000409031 CDK5RAP1Q96SZ6 601 aaKnown RBP17.49■□□□□ 0.39
SMPD4-202ENST00000409031 GPR22Q99680 433 aa17.49■□□□□ 0.39
SMPD4-202ENST00000409031 FNDC11Q9BVV2 318 aa17.49■□□□□ 0.39
SMPD4-202ENST00000409031 ELP3Q9H9T3 547 aa17.49■□□□□ 0.39
SMPD4-202ENST00000409031 RNF6Q9Y252 685 aa17.49■□□□□ 0.39
SMPD4-202ENST00000409031 ZSCAN5BA6NJL1 495 aa17.48■□□□□ 0.39
SMPD4-202ENST00000409031 A8MT66 165 aa17.48■□□□□ 0.39
SMPD4-202ENST00000409031 DHRS4L1P0CG22 281 aa17.48■□□□□ 0.39
SMPD4-202ENST00000409031 AQP1P29972 269 aa17.48■□□□□ 0.39
SMPD4-202ENST00000409031 MAPKAPK2P49137 400 aa17.48■□□□□ 0.39
SMPD4-202ENST00000409031 CENPAP49450 140 aa17.48■□□□□ 0.39
SMPD4-202ENST00000409031 FKBP1AP62942 108 aaKnown RBP17.48■□□□□ 0.39
SMPD4-202ENST00000409031 TBRG1Q3YBR2 411 aa17.48■□□□□ 0.39
SMPD4-202ENST00000409031 WSCD1Q658N2 575 aa17.48■□□□□ 0.39
SMPD4-202ENST00000409031 CARNMT1Q8N4J0 409 aa17.48■□□□□ 0.39
SMPD4-202ENST00000409031 OR52L1Q8NGH7 329 aa17.48■□□□□ 0.39
SMPD4-202ENST00000409031 TMIGD2Q96BF3 282 aa17.48■□□□□ 0.39
SMPD4-202ENST00000409031 TMEM209Q96SK2 561 aa17.48■□□□□ 0.39
SMPD4-202ENST00000409031 hCG_2039718K7EN88 272 aa17.48■□□□□ 0.39
SMPD4-202ENST00000409031 TOP3BO95985 862 aaKnown RBP17.48■□□□□ 0.39
SMPD4-202ENST00000409031 FAUP35544 74 aaKnown RBP17.48■□□□□ 0.39
SMPD4-202ENST00000409031 PPP5CP53041 499 aa17.48■□□□□ 0.39
SMPD4-202ENST00000409031 ALFQ53S48 1182 aa17.48■□□□□ 0.39
SMPD4-202ENST00000409031 ERAP2Q6P179 960 aa17.48■□□□□ 0.39
SMPD4-202ENST00000409031 LMO3Q8TAP4 145 aa17.48■□□□□ 0.39
SMPD4-202ENST00000409031 QRFPRQ96P65 431 aa17.48■□□□□ 0.39
SMPD4-202ENST00000409031 PDCD10Q9BUL8 212 aa17.48■□□□□ 0.39
SMPD4-202ENST00000409031 TRIT1Q9H3H1 467 aaKnown RBP17.48■□□□□ 0.39
SMPD4-202ENST00000409031 ZIM2Q9NZV7 527 aa17.48■□□□□ 0.39
SMPD4-202ENST00000409031 GTF2A1LQ9UNN4 478 aa17.48■□□□□ 0.39
SMPD4-202ENST00000409031 GRIP1Q9Y3R0 1128 aa17.48■□□□□ 0.39
SMPD4-202ENST00000409031 ANKRD33BA6NCL7 494 aa17.48■□□□□ 0.39
SMPD4-202ENST00000409031 SPATA31C2B4DYI2 1134 aa17.48■□□□□ 0.39
SMPD4-202ENST00000409031 NPM3O75607 178 aaKnown RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms