RNA–Protein interactions for RNA: ENST00000398958.6

RCC1-204, Transcript of regulator of chromosome condensation 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RCC1, Length 2,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-204ENST00000398958 GALNT18Q6P9A2 607 aa11.22□□□□□ -0.61
RCC1-204ENST00000398958 ANKS3Q6ZW76 656 aa11.22□□□□□ -0.61
RCC1-204ENST00000398958 EPHX4Q8IUS5 362 aa11.22□□□□□ -0.61
RCC1-204ENST00000398958 C12orf76Q8N812 135 aaPredicted RBP11.22□□□□□ -0.61
RCC1-204ENST00000398958 ATP6V0D2Q8N8Y2 350 aa11.22□□□□□ -0.61
RCC1-204ENST00000398958 DCBLD1Q8N8Z6 715 aa11.22□□□□□ -0.61
RCC1-204ENST00000398958 ACDQ96AP0 544 aa11.22□□□□□ -0.61
RCC1-204ENST00000398958 RMDN1Q96DB5 314 aa11.22□□□□□ -0.61
RCC1-204ENST00000398958 BTN2A3PQ96KV6 586 aa11.22□□□□□ -0.61
RCC1-204ENST00000398958 FBRSL1Q9HCM7 1045 aaKnown RBP11.22□□□□□ -0.61
RCC1-204ENST00000398958 CCL26Q9Y258 94 aa11.22□□□□□ -0.61
RCC1-204ENST00000398958 FAM32AQ9Y421 112 aaKnown RBP11.22□□□□□ -0.61
RCC1-204ENST00000398958 TARM1B6A8C7 271 aa11.21□□□□□ -0.61
RCC1-204ENST00000398958 UBDO15205 165 aa11.21□□□□□ -0.61
RCC1-204ENST00000398958 GPC4O75487 556 aa11.21□□□□□ -0.61
RCC1-204ENST00000398958 GOT2P00505 430 aaKnown RBP11.21□□□□□ -0.61
RCC1-204ENST00000398958 SNRPB2P08579 225 aaKnown RBP11.21□□□□□ -0.61
RCC1-204ENST00000398958 CNPP09543 421 aaKnown RBP11.21□□□□□ -0.61
RCC1-204ENST00000398958 TACR2P21452 398 aa11.21□□□□□ -0.61
RCC1-204ENST00000398958 MZF1P28698 734 aaPredicted RBP11.21□□□□□ -0.61
RCC1-204ENST00000398958 PRMT2P55345 433 aa11.21□□□□□ -0.61
RCC1-204ENST00000398958 ERVFC1P60507 584 aa11.21□□□□□ -0.61
RCC1-204ENST00000398958 TRIM16LQ309B1 348 aa11.21□□□□□ -0.61
RCC1-204ENST00000398958 UMODL1-AS1Q8N2C9 162 aa11.21□□□□□ -0.61
RCC1-204ENST00000398958 TCEAL4Q96EI5 215 aa11.21□□□□□ -0.61
RCC1-204ENST00000398958 C8orf48Q96LL4 319 aa11.21□□□□□ -0.61
RCC1-204ENST00000398958 TMEM248Q9NWD8 314 aa11.21□□□□□ -0.61
RCC1-204ENST00000398958 NCKIPSDQ9NZQ3 722 aa11.21□□□□□ -0.61
RCC1-204ENST00000398958 SARDHQ9UL12 918 aa11.21□□□□□ -0.61
RCC1-204ENST00000398958 ERGIC3Q9Y282 383 aa11.21□□□□□ -0.61
RCC1-204ENST00000398958 ANKRD6Q9Y2G4 727 aa11.21□□□□□ -0.61
RCC1-204ENST00000398958 FCF1Q9Y324 198 aaKnown RBP11.21□□□□□ -0.61
RCC1-204ENST00000398958 YIPF1Q9Y548 306 aa11.21□□□□□ -0.61
RCC1-204ENST00000398958 CELSR3Q9NYQ7 3312 aa11.21□□□□□ -0.62
RCC1-204ENST00000398958 GREB1Q4ZG55 1949 aa11.21□□□□□ -0.62
RCC1-204ENST00000398958 CCDC162PA2VCL2 907 aa11.21□□□□□ -0.62
RCC1-204ENST00000398958 PITPNM1O00562 1244 aa11.21□□□□□ -0.62
RCC1-204ENST00000398958 SUPT7LO94864 414 aa11.21□□□□□ -0.62
RCC1-204ENST00000398958 URODP06132 367 aa11.21□□□□□ -0.62
RCC1-204ENST00000398958 ATXN1LP0C7T5 689 aaKnown RBP11.21□□□□□ -0.62
RCC1-204ENST00000398958 CTPS1P17812 591 aa11.21□□□□□ -0.62
RCC1-204ENST00000398958 PAMP19021 973 aa11.21□□□□□ -0.62
RCC1-204ENST00000398958 CCNA2P20248 432 aa11.21□□□□□ -0.62
RCC1-204ENST00000398958 IRS1P35568 1242 aa11.21□□□□□ -0.62
RCC1-204ENST00000398958 SQLEQ14534 574 aa11.21□□□□□ -0.62
RCC1-204ENST00000398958 SLC36A3Q495N2 470 aa11.21□□□□□ -0.62
RCC1-204ENST00000398958 ABRAXAS1Q6UWZ7 409 aa11.21□□□□□ -0.62
RCC1-204ENST00000398958 CILP2Q8IUL8 1156 aa11.21□□□□□ -0.62
RCC1-204ENST00000398958 PELI3Q8N2H9 469 aa11.21□□□□□ -0.62
RCC1-204ENST00000398958 PACRGLQ8N7B6 248 aa11.21□□□□□ -0.62
RCC1-204ENST00000398958 ARL10Q8N8L6 244 aa11.21□□□□□ -0.62
RCC1-204ENST00000398958 OR9I1Q8NGQ6 314 aa11.21□□□□□ -0.62
RCC1-204ENST00000398958 SPPL2BQ8TCT7 592 aa11.21□□□□□ -0.62
RCC1-204ENST00000398958 TRUB1Q8WWH5 349 aaKnown RBP11.21□□□□□ -0.62
RCC1-204ENST00000398958 STON2Q8WXE9 905 aa11.21□□□□□ -0.62
RCC1-204ENST00000398958 MAELQ96JY0 434 aaKnown RBP11.21□□□□□ -0.62
RCC1-204ENST00000398958 KCNA7Q96RP8 456 aa11.21□□□□□ -0.62
RCC1-204ENST00000398958 TNKS2Q9H2K2 1166 aa11.21□□□□□ -0.62
RCC1-204ENST00000398958 MRPL46Q9H2W6 279 aaKnown RBP11.21□□□□□ -0.62
RCC1-204ENST00000398958 PALMDQ9NP74 551 aa11.21□□□□□ -0.62
RCC1-204ENST00000398958 ARMC1Q9NVT9 282 aa11.21□□□□□ -0.62
RCC1-204ENST00000398958 SPATA7Q9P0W8 599 aa11.21□□□□□ -0.62
RCC1-204ENST00000398958 TMEM181Q9P2C4 612 aa11.21□□□□□ -0.62
RCC1-204ENST00000398958 GALPQ9UBC7 116 aa11.21□□□□□ -0.62
RCC1-204ENST00000398958 SPO11Q9Y5K1 396 aa11.21□□□□□ -0.62
RCC1-204ENST00000398958 TANC1Q9C0D5 1861 aa11.21□□□□□ -0.62
RCC1-204ENST00000398958 A8MT66 165 aa11.2□□□□□ -0.62
RCC1-204ENST00000398958 SYN3O14994 580 aa11.2□□□□□ -0.62
RCC1-204ENST00000398958 INPPL1O15357 1258 aa11.2□□□□□ -0.62
RCC1-204ENST00000398958 LDB2O43679 373 aa11.2□□□□□ -0.62
RCC1-204ENST00000398958 NRP2O60462 931 aa11.2□□□□□ -0.62
RCC1-204ENST00000398958 CXCL14O95715 111 aa11.2□□□□□ -0.62
RCC1-204ENST00000398958 BCL10O95999 233 aa11.2□□□□□ -0.62
RCC1-204ENST00000398958 KPNA1P52294 538 aaPredicted RBP11.2□□□□□ -0.62
RCC1-204ENST00000398958 SERINC3Q13530 473 aa11.2□□□□□ -0.62
RCC1-204ENST00000398958 TRIP4Q15650 581 aaPredicted RBP11.2□□□□□ -0.62
RCC1-204ENST00000398958 ZNF362Q5T0B9 420 aaPredicted RBP11.2□□□□□ -0.62
RCC1-204ENST00000398958 INTS11Q5TA45 600 aaKnown RBP11.2□□□□□ -0.62
RCC1-204ENST00000398958 PTERQ96BW5 349 aa11.2□□□□□ -0.62
RCC1-204ENST00000398958 ZNF558Q96NG5 402 aa11.2□□□□□ -0.62
RCC1-204ENST00000398958 NSUN5Q96P11 429 aaKnown RBP11.2□□□□□ -0.62
RCC1-204ENST00000398958 C17orf80Q9BSJ5 609 aa11.2□□□□□ -0.62
RCC1-204ENST00000398958 TRIM62Q9BVG3 475 aa11.2□□□□□ -0.62
RCC1-204ENST00000398958 TRIM8Q9BZR9 551 aa11.2□□□□□ -0.62
RCC1-204ENST00000398958 IL1RL2Q9HB29 575 aa11.2□□□□□ -0.62
RCC1-204ENST00000398958 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.2□□□□□ -0.621e-8■■□□□ 11.8
RCC1-204ENST00000398958 GPC6Q9Y625 555 aaPredicted RBP11.2□□□□□ -0.62
RCC1-204ENST00000398958 A0A1B0GTL3 188 aa11.2□□□□□ -0.62
RCC1-204ENST00000398958 ZNF840PA6NDX5 716 aa11.2□□□□□ -0.62
RCC1-204ENST00000398958 TRIM64A6NGJ6 449 aa11.2□□□□□ -0.62
RCC1-204ENST00000398958 F5H5T6 163 aa11.2□□□□□ -0.62
RCC1-204ENST00000398958 H0Y626 953 aa11.2□□□□□ -0.62
RCC1-204ENST00000398958 UBFD1O14562 309 aaKnown RBP11.2□□□□□ -0.62
RCC1-204ENST00000398958 PSMD3O43242 534 aa11.2□□□□□ -0.62
RCC1-204ENST00000398958 CNOT3O75175 753 aaKnown RBP11.2□□□□□ -0.62
RCC1-204ENST00000398958 FGF18O76093 207 aa11.2□□□□□ -0.62
RCC1-204ENST00000398958 MATN1P21941 496 aa11.2□□□□□ -0.62
RCC1-204ENST00000398958 IL10P22301 178 aa11.2□□□□□ -0.62
RCC1-204ENST00000398958 FMO4P31512 558 aa11.2□□□□□ -0.62
RCC1-204ENST00000398958 ECT2LQ008S8 904 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms