RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 ARMC3Q5W041 872 aa25.12■■□□□ 1.61
U2AF1-203ENST00000398137 HID1Q8IV36 788 aa25.12■■□□□ 1.61
U2AF1-203ENST00000398137 OR6P1Q8NGX9 317 aa25.12■■□□□ 1.61
U2AF1-203ENST00000398137 IFI44Q8TCB0 444 aa25.12■■□□□ 1.61
U2AF1-203ENST00000398137 FBXO25Q8TCJ0 367 aa25.12■■□□□ 1.61
U2AF1-203ENST00000398137 HNRNPLLQ8WVV9 542 aaKnown RBP25.12■■□□□ 1.61
U2AF1-203ENST00000398137 RHOXF2Q9BQY4 288 aa25.12■■□□□ 1.61
U2AF1-203ENST00000398137 MRPL40Q9NQ50 206 aaKnown RBP25.12■■□□□ 1.61
U2AF1-203ENST00000398137 SPASTQ9UBP0 616 aa25.12■■□□□ 1.61
U2AF1-203ENST00000398137 CRLS1Q9UJA2 301 aa25.12■■□□□ 1.61
U2AF1-203ENST00000398137 A0A087WV48 116 aa25.11■■□□□ 1.61
U2AF1-203ENST00000398137 PRSS38A1L453 326 aa25.11■■□□□ 1.61
U2AF1-203ENST00000398137 BHMG1C9JSJ3 638 aaPredicted RBP25.11■■□□□ 1.61
U2AF1-203ENST00000398137 CEACAM5P06731 702 aa25.11■■□□□ 1.61
U2AF1-203ENST00000398137 HOXB3P14651 431 aaPredicted RBP25.11■■□□□ 1.61
U2AF1-203ENST00000398137 CDKN1CP49918 316 aaPredicted RBP25.11■■□□□ 1.61
U2AF1-203ENST00000398137 CAV1Q03135 178 aa25.11■■□□□ 1.61
U2AF1-203ENST00000398137 PPARDQ03181 441 aa25.11■■□□□ 1.61
U2AF1-203ENST00000398137 CACNG1Q06432 222 aa25.11■■□□□ 1.61
U2AF1-203ENST00000398137 GPRC6AQ5T6X5 926 aa25.11■■□□□ 1.61
U2AF1-203ENST00000398137 MARK2Q7KZI7 788 aaKnown RBP25.11■■□□□ 1.61
U2AF1-203ENST00000398137 RD3Q7Z3Z2 195 aa25.11■■□□□ 1.61
U2AF1-203ENST00000398137 SNX20Q7Z614 316 aa25.11■■□□□ 1.61
U2AF1-203ENST00000398137 WDR83Q9BRX9 315 aaKnown RBP25.11■■□□□ 1.61
U2AF1-203ENST00000398137 CYP4F12Q9HCS2 524 aa25.11■■□□□ 1.61
U2AF1-203ENST00000398137 CHMP2BQ9UQN3 213 aa25.11■■□□□ 1.61
U2AF1-203ENST00000398137 SLC17A4Q9Y2C5 497 aa25.11■■□□□ 1.61
U2AF1-203ENST00000398137 RPS6KL1Q9Y6S9 549 aa25.11■■□□□ 1.61
U2AF1-203ENST00000398137 MAGEB16A2A368 324 aa25.1■■□□□ 1.61
U2AF1-203ENST00000398137 EME2A4GXA9 379 aaPredicted RBP25.1■■□□□ 1.61
U2AF1-203ENST00000398137 LMO7DNF2Z398 122 aa25.1■■□□□ 1.61
U2AF1-203ENST00000398137 YY2O15391 372 aa25.1■■□□□ 1.61
U2AF1-203ENST00000398137 PGAM1P18669 254 aa25.1■■□□□ 1.61
U2AF1-203ENST00000398137 FOXN2P32314 431 aa25.1■■□□□ 1.61
U2AF1-203ENST00000398137 ELK3P41970 407 aa25.1■■□□□ 1.61
U2AF1-203ENST00000398137 PDIA2Q13087 525 aaKnown RBP25.1■■□□□ 1.61
U2AF1-203ENST00000398137 ANKRD20A4Q4UJ75 823 aa25.1■■□□□ 1.61
U2AF1-203ENST00000398137 PERM1Q5SV97 790 aa25.1■■□□□ 1.61
U2AF1-203ENST00000398137 TAS2R42Q7RTR8 314 aa25.1■■□□□ 1.61
U2AF1-203ENST00000398137 IGDCC3Q8IVU1 814 aa25.1■■□□□ 1.61
U2AF1-203ENST00000398137 SLC35F3Q8IY50 421 aa25.1■■□□□ 1.61
U2AF1-203ENST00000398137 DDHD1Q8NEL9 900 aa25.1■■□□□ 1.61
U2AF1-203ENST00000398137 ULK4Q96C45 1275 aa25.1■■□□□ 1.61
U2AF1-203ENST00000398137 FCRL3Q96P31 734 aaPredicted RBP25.1■■□□□ 1.61
U2AF1-203ENST00000398137 EBNA1BP2Q99848 306 aaKnown RBP25.1■■□□□ 1.61
U2AF1-203ENST00000398137 OR2AG1Q9H205 316 aa25.1■■□□□ 1.61
U2AF1-203ENST00000398137 FAM114A2Q9NRY5 505 aa25.1■■□□□ 1.61
U2AF1-203ENST00000398137 TNFRSF10CO14798 259 aa25.09■■□□□ 1.61
U2AF1-203ENST00000398137 RASGRP1O95267 797 aa25.09■■□□□ 1.61
U2AF1-203ENST00000398137 VAPBO95292 243 aa25.09■■□□□ 1.61
U2AF1-203ENST00000398137 ARNTP27540 789 aa25.09■■□□□ 1.61
U2AF1-203ENST00000398137 HK3P52790 923 aa25.09■■□□□ 1.61
U2AF1-203ENST00000398137 FASTKD3Q14CZ7 662 aaKnown RBP25.09■■□□□ 1.61
U2AF1-203ENST00000398137 TCEA2Q15560 299 aa25.09■■□□□ 1.61
U2AF1-203ENST00000398137 GPR33Q49SQ1 333 aa25.09■■□□□ 1.61
U2AF1-203ENST00000398137 LDLRAP1Q5SW96 308 aa25.09■■□□□ 1.61
U2AF1-203ENST00000398137 C6orf132Q5T0Z8 1188 aa25.09■■□□□ 1.61
U2AF1-203ENST00000398137 KIAA0930Q6ICG6 404 aaPredicted RBP25.09■■□□□ 1.61
U2AF1-203ENST00000398137 CENPUQ71F23 418 aa25.09■■□□□ 1.61
U2AF1-203ENST00000398137 ADGRG6Q86SQ4 1221 aa25.09■■□□□ 1.61
U2AF1-203ENST00000398137 ANKMY2Q8IV38 441 aa25.09■■□□□ 1.61
U2AF1-203ENST00000398137 PIANPQ8IYJ0 282 aa25.09■■□□□ 1.61
U2AF1-203ENST00000398137 NXPE1Q8N323 547 aa25.09■■□□□ 1.61
U2AF1-203ENST00000398137 CFAP36Q96G28 342 aa25.09■■□□□ 1.61
U2AF1-203ENST00000398137 CRELD1Q96HD1 420 aa25.09■■□□□ 1.61
U2AF1-203ENST00000398137 CARS2Q9HA77 564 aaKnown RBP25.09■■□□□ 1.61
U2AF1-203ENST00000398137 TRIM39Q9HCM9 518 aa25.09■■□□□ 1.61
U2AF1-203ENST00000398137 ZDHHC18Q9NUE0 388 aa25.09■■□□□ 1.61
U2AF1-203ENST00000398137 VPS18Q9P253 973 aa25.09■■□□□ 1.61
U2AF1-203ENST00000398137 ATXN10Q9UBB4 475 aa25.09■■□□□ 1.61
U2AF1-203ENST00000398137 SUFUQ9UMX1 484 aa25.09■■□□□ 1.61
U2AF1-203ENST00000398137 AK5Q9Y6K8 562 aa25.09■■□□□ 1.61
U2AF1-203ENST00000398137 TRBV5-4A0A0C4DH59 114 aa25.08■■□□□ 1.61
U2AF1-203ENST00000398137 E7ESA3 106 aa25.08■■□□□ 1.61
U2AF1-203ENST00000398137 USP1O94782 785 aa25.08■■□□□ 1.61
U2AF1-203ENST00000398137 FUCA1P04066 466 aa25.08■■□□□ 1.61
U2AF1-203ENST00000398137 AKT1P31749 480 aa25.08■■□□□ 1.61
U2AF1-203ENST00000398137 GNPDA1P46926 289 aa25.08■■□□□ 1.61
U2AF1-203ENST00000398137 DUSP3P51452 185 aaPredicted RBP25.08■■□□□ 1.61
U2AF1-203ENST00000398137 EFL1Q7Z2Z2 1120 aaKnown RBP25.08■■□□□ 1.61
U2AF1-203ENST00000398137 TMEM135Q86UB9 458 aa25.08■■□□□ 1.61
U2AF1-203ENST00000398137 SERPINA9Q86WD7 417 aa25.08■■□□□ 1.61
U2AF1-203ENST00000398137 OR4L1Q8NH43 312 aa25.08■■□□□ 1.61
U2AF1-203ENST00000398137 IFT81Q8WYA0 676 aa25.08■■□□□ 1.61
U2AF1-203ENST00000398137 LRRC39Q96DD0 335 aa25.08■■□□□ 1.61
U2AF1-203ENST00000398137 CCDC97Q96F63 343 aaPredicted RBP25.08■■□□□ 1.61
U2AF1-203ENST00000398137 SLC13A1Q9BZW2 595 aa25.08■■□□□ 1.61
U2AF1-203ENST00000398137 IL1RAPL1Q9NZN1 696 aa25.08■■□□□ 1.61
U2AF1-203ENST00000398137 TEX264Q9Y6I9 313 aa25.08■■□□□ 1.61
U2AF1-203ENST00000398137 CACNA1GO43497 2377 aa25.08■■□□□ 1.6
U2AF1-203ENST00000398137 ZCWPW2A0A1B0GU75 182 aa25.07■■□□□ 1.6
U2AF1-203ENST00000398137 CPED1A4D0V7 1026 aa25.07■■□□□ 1.6
U2AF1-203ENST00000398137 AGAP14A8MT82 685 aa25.07■■□□□ 1.6
U2AF1-203ENST00000398137 BRINP1O60477 761 aa25.07■■□□□ 1.6
U2AF1-203ENST00000398137 POLBP06746 335 aa25.07■■□□□ 1.6
U2AF1-203ENST00000398137 IVLP07476 585 aa25.07■■□□□ 1.6
U2AF1-203ENST00000398137 ZNF8P17098 575 aaPredicted RBP25.07■■□□□ 1.6
U2AF1-203ENST00000398137 PAMP19021 973 aa25.07■■□□□ 1.6
U2AF1-203ENST00000398137 ACRV1P26436 265 aa25.07■■□□□ 1.6
U2AF1-203ENST00000398137 HLTFQ14527 1009 aaKnown RBP eCLIP25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms