RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 BUD23O43709 281 aaKnown RBP14.36□□□□□ -0.11
SEC13-208ENST00000397109 KCNJ13O60928 360 aa14.36□□□□□ -0.11
SEC13-208ENST00000397109 PHF2O75151 1096 aa14.36□□□□□ -0.11
SEC13-208ENST00000397109 CPNE6O95741 557 aa14.36□□□□□ -0.11
SEC13-208ENST00000397109 ZNF7P17097 686 aaPredicted RBP14.36□□□□□ -0.11
SEC13-208ENST00000397109 VCLP18206 1134 aa14.36□□□□□ -0.11
SEC13-208ENST00000397109 RBMS1P29558 406 aaKnown RBP14.36□□□□□ -0.11
SEC13-208ENST00000397109 HADHAP40939 763 aa14.36□□□□□ -0.11
SEC13-208ENST00000397109 FNTAP49354 379 aa14.36□□□□□ -0.11
SEC13-208ENST00000397109 PDX1P52945 283 aa14.36□□□□□ -0.11
SEC13-208ENST00000397109 OR1D5P58170 312 aa14.36□□□□□ -0.11
SEC13-208ENST00000397109 CASP8Q14790 479 aa14.36□□□□□ -0.11
SEC13-208ENST00000397109 KIR2DS5Q14953 304 aa14.36□□□□□ -0.11
SEC13-208ENST00000397109 INSCQ1MX18 579 aa14.36□□□□□ -0.11
SEC13-208ENST00000397109 C3orf38Q5JPI3 329 aa14.36□□□□□ -0.11
SEC13-208ENST00000397109 DENND5AQ6IQ26 1287 aa14.36□□□□□ -0.11
SEC13-208ENST00000397109 IYDQ6PHW0 289 aa14.36□□□□□ -0.11
SEC13-208ENST00000397109 PIM3Q86V86 326 aa14.36□□□□□ -0.11
SEC13-208ENST00000397109 OR4K2Q8NGD2 314 aa14.36□□□□□ -0.11
SEC13-208ENST00000397109 ZNF398Q8TD17 642 aa14.36□□□□□ -0.11
SEC13-208ENST00000397109 SLC37A2Q8TED4 501 aa14.36□□□□□ -0.11
SEC13-208ENST00000397109 SH3KBP1Q96B97 665 aa14.36□□□□□ -0.11
SEC13-208ENST00000397109 DPYSL5Q9BPU6 564 aa14.36□□□□□ -0.11
SEC13-208ENST00000397109 AP1M1Q9BXS5 423 aa14.36□□□□□ -0.11
SEC13-208ENST00000397109 FAM114A2Q9NRY5 505 aa14.36□□□□□ -0.11
SEC13-208ENST00000397109 THSD1Q9NS62 852 aa14.36□□□□□ -0.11
SEC13-208ENST00000397109 KLC4Q9NSK0 619 aa14.36□□□□□ -0.11
SEC13-208ENST00000397109 SMOXQ9NWM0 555 aa14.36□□□□□ -0.11
SEC13-208ENST00000397109 ZNF148Q9UQR1 794 aa14.36□□□□□ -0.11
SEC13-208ENST00000397109 UTP11Q9Y3A2 253 aaKnown RBP14.36□□□□□ -0.11
SEC13-208ENST00000397109 A0A087WV48 116 aa14.35□□□□□ -0.11
SEC13-208ENST00000397109 ERI2A8K979 691 aaKnown RBP14.35□□□□□ -0.11
SEC13-208ENST00000397109 CASC3O15234 703 aaKnown RBP14.35□□□□□ -0.11
SEC13-208ENST00000397109 RAD51CO43502 376 aa14.35□□□□□ -0.11
SEC13-208ENST00000397109 UGT1A9O60656 530 aa14.35□□□□□ -0.11
SEC13-208ENST00000397109 SNX2O60749 519 aa14.35□□□□□ -0.11
SEC13-208ENST00000397109 MTX2O75431 263 aa14.35□□□□□ -0.11
SEC13-208ENST00000397109 SEC31AO94979 1220 aaKnown RBP14.35□□□□□ -0.11
SEC13-208ENST00000397109 METTL18O95568 372 aa14.35□□□□□ -0.11
SEC13-208ENST00000397109 AP2A1O95782 977 aa14.35□□□□□ -0.11
SEC13-208ENST00000397109 F3P13726 295 aa14.35□□□□□ -0.11
SEC13-208ENST00000397109 UGT1A6P19224 532 aa14.35□□□□□ -0.11
SEC13-208ENST00000397109 UGT1A1P22309 533 aa14.35□□□□□ -0.11
SEC13-208ENST00000397109 UGT1A4P22310 534 aa14.35□□□□□ -0.11
SEC13-208ENST00000397109 UGT1A3P35503 534 aa14.35□□□□□ -0.11
SEC13-208ENST00000397109 UGT1A5P35504 534 aa14.35□□□□□ -0.11
SEC13-208ENST00000397109 FDFT1P37268 417 aa14.35□□□□□ -0.11
SEC13-208ENST00000397109 GDF10P55107 478 aa14.35□□□□□ -0.11
SEC13-208ENST00000397109 GPLD1P80108 840 aa14.35□□□□□ -0.11
SEC13-208ENST00000397109 ZFP36L1Q07352 338 aaKnown RBP14.35□□□□□ -0.11
SEC13-208ENST00000397109 MSLNQ13421 630 aaPredicted RBP14.35□□□□□ -0.11
SEC13-208ENST00000397109 SQSTM1Q13501 440 aa14.35□□□□□ -0.11
SEC13-208ENST00000397109 OLIG2Q13516 323 aa14.35□□□□□ -0.11
SEC13-208ENST00000397109 SPARCL1Q14515 664 aa14.35□□□□□ -0.11
SEC13-208ENST00000397109 CRTC3Q6UUV7 619 aa14.35□□□□□ -0.11
SEC13-208ENST00000397109 LRRC69Q6ZNQ3 347 aa14.35□□□□□ -0.11
SEC13-208ENST00000397109 LINC00523Q86TU6 105 aa14.35□□□□□ -0.11
SEC13-208ENST00000397109 SLC9B2Q86UD5 537 aa14.35□□□□□ -0.11
SEC13-208ENST00000397109 KLHL7Q8IXQ5 586 aa14.35□□□□□ -0.11
SEC13-208ENST00000397109 DDHD1Q8NEL9 900 aa14.35□□□□□ -0.11
SEC13-208ENST00000397109 SLCO2A1Q92959 643 aa14.35□□□□□ -0.11
SEC13-208ENST00000397109 MAGOHBQ96A72 148 aaKnown RBP14.35□□□□□ -0.11
SEC13-208ENST00000397109 TMEM159Q96B96 161 aa14.35□□□□□ -0.11
SEC13-208ENST00000397109 UGT1A7Q9HAW7 530 aa14.35□□□□□ -0.11
SEC13-208ENST00000397109 UGT1A10Q9HAW8 530 aa14.35□□□□□ -0.11
SEC13-208ENST00000397109 UGT1A8Q9HAW9 530 aa14.35□□□□□ -0.11
SEC13-208ENST00000397109 EPB41L5Q9HCM4 733 aa14.35□□□□□ -0.11
SEC13-208ENST00000397109 SARS2Q9NP81 518 aaKnown RBP14.35□□□□□ -0.11
SEC13-208ENST00000397109 ATXN7L1Q9ULK2 861 aaPredicted RBP14.35□□□□□ -0.11
SEC13-208ENST00000397109 DNMT3AQ9Y6K1 912 aaPredicted RBP14.35□□□□□ -0.11
SEC13-208ENST00000397109 ZZEF1O43149 2961 aa14.35□□□□□ -0.11
SEC13-208ENST00000397109 TRBV23OR9-2A0A075B6M9 112 aa14.34□□□□□ -0.11
SEC13-208ENST00000397109 A6NCN8 305 aa14.34□□□□□ -0.11
SEC13-208ENST00000397109 TLX3O43711 291 aaPredicted RBP14.34□□□□□ -0.11
SEC13-208ENST00000397109 PRAMEF1O95521 474 aa14.34□□□□□ -0.11
SEC13-208ENST00000397109 EML2O95834 649 aa14.34□□□□□ -0.11
SEC13-208ENST00000397109 COILP38432 576 aaPredicted RBP14.34□□□□□ -0.11
SEC13-208ENST00000397109 EIF2S3P41091 472 aaKnown RBP14.34□□□□□ -0.11
SEC13-208ENST00000397109 GUCY2DQ02846 1103 aa14.34□□□□□ -0.11
SEC13-208ENST00000397109 HHEXQ03014 270 aa14.34□□□□□ -0.11
SEC13-208ENST00000397109 AMZ1Q400G9 498 aa14.34□□□□□ -0.11
SEC13-208ENST00000397109 KHDC1Q4VXA5 237 aaKnown RBP14.34□□□□□ -0.11
SEC13-208ENST00000397109 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.34□□□□□ -0.11
SEC13-208ENST00000397109 GPRC6AQ5T6X5 926 aa14.34□□□□□ -0.11
SEC13-208ENST00000397109 TTC27Q6P3X3 843 aa14.34□□□□□ -0.11
SEC13-208ENST00000397109 SYDE1Q6ZW31 735 aaPredicted RBP14.34□□□□□ -0.11
SEC13-208ENST00000397109 RAB11FIP2Q7L804 512 aa14.34□□□□□ -0.11
SEC13-208ENST00000397109 B3GNT8Q7Z7M8 397 aa14.34□□□□□ -0.11
SEC13-208ENST00000397109 TRAPPC5Q8IUR0 188 aa14.34□□□□□ -0.11
SEC13-208ENST00000397109 FBXO39Q8N4B4 442 aa14.34□□□□□ -0.11
SEC13-208ENST00000397109 ZNF514Q96K75 400 aaPredicted RBP14.34□□□□□ -0.11
SEC13-208ENST00000397109 SLC46A1Q96NT5 459 aa14.34□□□□□ -0.11
SEC13-208ENST00000397109 SLC38A3Q99624 504 aa14.34□□□□□ -0.11
SEC13-208ENST00000397109 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.34□□□□□ -0.11
SEC13-208ENST00000397109 FOXP3Q9BZS1 431 aa14.34□□□□□ -0.11
SEC13-208ENST00000397109 OSGEPL1Q9H4B0 414 aa14.34□□□□□ -0.11
SEC13-208ENST00000397109 KCNK4Q9NYG8 393 aa14.34□□□□□ -0.11
SEC13-208ENST00000397109 AKAP7Q9P0M2 348 aaPredicted RBP14.34□□□□□ -0.11
SEC13-208ENST00000397109 SLC23A2Q9UGH3 650 aa14.34□□□□□ -0.11
SEC13-208ENST00000397109 IGHV1OR21-1A0A087WYE8 117 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms