RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 KLC3Q6P597 504 aa12.55□□□□□ -0.4
TRIM39-204ENST00000396548 RASGRP3Q8IV61 690 aa12.55□□□□□ -0.4
TRIM39-204ENST00000396548 ADHFE1Q8IWW8 467 aa12.55□□□□□ -0.4
TRIM39-204ENST00000396548 LSMEM2Q8N112 164 aa12.55□□□□□ -0.4
TRIM39-204ENST00000396548 RASGEF1AQ8N9B8 481 aa12.55□□□□□ -0.4
TRIM39-204ENST00000396548 PLA2G15Q8NCC3 412 aa12.55□□□□□ -0.4
TRIM39-204ENST00000396548 CXorf40AQ8TE69 158 aa12.55□□□□□ -0.4
TRIM39-204ENST00000396548 MRGPRX1Q96LB2 322 aa12.55□□□□□ -0.4
TRIM39-204ENST00000396548 NSRP1Q9H0G5 558 aaKnown RBP12.55□□□□□ -0.4
TRIM39-204ENST00000396548 SPATS2LQ9NUQ6 558 aaKnown RBP12.55□□□□□ -0.4
TRIM39-204ENST00000396548 IGLON5A6NGN9 336 aa12.54□□□□□ -0.4
TRIM39-204ENST00000396548 TMEM114B3SHH9 223 aa12.54□□□□□ -0.4
TRIM39-204ENST00000396548 KERAO60938 352 aa12.54□□□□□ -0.4
TRIM39-204ENST00000396548 SLC1A6P48664 564 aa12.54□□□□□ -0.4
TRIM39-204ENST00000396548 IL2P60568 153 aa12.54□□□□□ -0.4
TRIM39-204ENST00000396548 STARD3Q14849 445 aa12.54□□□□□ -0.4
TRIM39-204ENST00000396548 ADAMTSL4Q6UY14 1074 aa12.54□□□□□ -0.4
TRIM39-204ENST00000396548 SPATA21Q7Z572 469 aa12.54□□□□□ -0.4
TRIM39-204ENST00000396548 MOCOSQ96EN8 888 aa12.54□□□□□ -0.4
TRIM39-204ENST00000396548 LINGO1Q96FE5 620 aa12.54□□□□□ -0.4
TRIM39-204ENST00000396548 EPHX3Q9H6B9 360 aa12.54□□□□□ -0.4
TRIM39-204ENST00000396548 FZD4Q9ULV1 537 aa12.54□□□□□ -0.4
TRIM39-204ENST00000396548 CDYLQ9Y232 598 aa12.54□□□□□ -0.4
TRIM39-204ENST00000396548 NEMP2A6NFY4 417 aa12.54□□□□□ -0.4
TRIM39-204ENST00000396548 E5RI56 91 aa12.54□□□□□ -0.4
TRIM39-204ENST00000396548 CDC7O00311 574 aa12.54□□□□□ -0.4
TRIM39-204ENST00000396548 MAN2B1O00754 1011 aa12.54□□□□□ -0.4
TRIM39-204ENST00000396548 MTX2O75431 263 aa12.54□□□□□ -0.4
TRIM39-204ENST00000396548 LYPLA1O75608 230 aaPredicted RBP12.54□□□□□ -0.4
TRIM39-204ENST00000396548 HK3P52790 923 aa12.54□□□□□ -0.4
TRIM39-204ENST00000396548 ADPRHP54922 357 aa12.54□□□□□ -0.4
TRIM39-204ENST00000396548 ABCE1P61221 599 aaKnown RBP12.54□□□□□ -0.4
TRIM39-204ENST00000396548 PPP1R3AQ16821 1122 aa12.54□□□□□ -0.4
TRIM39-204ENST00000396548 GKAP1Q5VSY0 366 aaPredicted RBP12.54□□□□□ -0.4
TRIM39-204ENST00000396548 USP30Q70CQ3 517 aa12.54□□□□□ -0.4
TRIM39-204ENST00000396548 ZBTB2Q8N680 514 aa12.54□□□□□ -0.4
TRIM39-204ENST00000396548 ANKS4BQ8N8V4 417 aa12.54□□□□□ -0.4
TRIM39-204ENST00000396548 C10orf82Q8WW14 230 aa12.54□□□□□ -0.4
TRIM39-204ENST00000396548 L3HYPDHQ96EM0 354 aa12.54□□□□□ -0.4
TRIM39-204ENST00000396548 C1QTNF2Q9BXJ5 285 aa12.54□□□□□ -0.4
TRIM39-204ENST00000396548 DRC3Q9H069 523 aa12.54□□□□□ -0.4
TRIM39-204ENST00000396548 FBXL12Q9NXK8 326 aa12.54□□□□□ -0.4
TRIM39-204ENST00000396548 KLHL14Q9P2G3 628 aa12.54□□□□□ -0.4
TRIM39-204ENST00000396548 DOCK9Q9BZ29 2069 aa12.53□□□□□ -0.4
TRIM39-204ENST00000396548 CHURC1-FNTBB4DL54 471 aa12.53□□□□□ -0.4
TRIM39-204ENST00000396548 RNASEH2AO75792 299 aaKnown RBP12.53□□□□□ -0.4
TRIM39-204ENST00000396548 TEAD1P28347 426 aa12.53□□□□□ -0.4
TRIM39-204ENST00000396548 ACSBG2Q5FVE4 666 aa12.53□□□□□ -0.4
TRIM39-204ENST00000396548 EOGTQ5NDL2 527 aa12.53□□□□□ -0.4
TRIM39-204ENST00000396548 SEL1L3Q68CR1 1132 aa12.53□□□□□ -0.4
TRIM39-204ENST00000396548 ADGRG6Q86SQ4 1221 aa12.53□□□□□ -0.4
TRIM39-204ENST00000396548 CACUL1Q86Y37 369 aa12.53□□□□□ -0.4
TRIM39-204ENST00000396548 TP53I13Q8NBR0 393 aaPredicted RBP12.53□□□□□ -0.4
TRIM39-204ENST00000396548 TMEM237Q96Q45 408 aa12.53□□□□□ -0.4
TRIM39-204ENST00000396548 KRBA1A5PL33 1030 aa12.53□□□□□ -0.4
TRIM39-204ENST00000396548 IPO13O94829 963 aaKnown RBP12.53□□□□□ -0.4
TRIM39-204ENST00000396548 NDUFV2P19404 249 aa12.53□□□□□ -0.4
TRIM39-204ENST00000396548 STARD6P59095 220 aa12.53□□□□□ -0.4
TRIM39-204ENST00000396548 PRKCQQ04759 706 aa12.53□□□□□ -0.4
TRIM39-204ENST00000396548 WSCD2Q2TBF2 565 aa12.53□□□□□ -0.4
TRIM39-204ENST00000396548 PNCKQ6P2M8 343 aa12.53□□□□□ -0.4
TRIM39-204ENST00000396548 SBSNQ6UWP8 590 aa12.53□□□□□ -0.4
TRIM39-204ENST00000396548 RFWD2Q8NHY2 731 aa12.53□□□□□ -0.4
TRIM39-204ENST00000396548 SGF29Q96ES7 293 aa12.53□□□□□ -0.4
TRIM39-204ENST00000396548 CD93Q9NPY3 652 aa12.53□□□□□ -0.4
TRIM39-204ENST00000396548 KCTD5Q9NXV2 234 aa12.53□□□□□ -0.4
TRIM39-204ENST00000396548 GULP1Q9UBP9 304 aa12.53□□□□□ -0.4
TRIM39-204ENST00000396548 NPEPPSL1A6NEC2 478 aa12.53□□□□□ -0.4
TRIM39-204ENST00000396548 EIF3FO00303 357 aaPredicted RBP12.53□□□□□ -0.4
TRIM39-204ENST00000396548 ZNF195O14628 629 aa12.53□□□□□ -0.4
TRIM39-204ENST00000396548 MAGEC1O60732 1142 aa12.53□□□□□ -0.4
TRIM39-204ENST00000396548 TRIM16O95361 564 aa12.53□□□□□ -0.4
TRIM39-204ENST00000396548 DNTTP04053 509 aa12.53□□□□□ -0.4
TRIM39-204ENST00000396548 OR56A5P0C7T3 313 aa12.53□□□□□ -0.4
TRIM39-204ENST00000396548 CBSLP0DN79 551 aa12.53□□□□□ -0.4
TRIM39-204ENST00000396548 GABRG2P18507 467 aa12.53□□□□□ -0.4
TRIM39-204ENST00000396548 ITGB6P18564 788 aa12.53□□□□□ -0.4
TRIM39-204ENST00000396548 CBSP35520 551 aa12.53□□□□□ -0.4
TRIM39-204ENST00000396548 PRLHRP49683 370 aa12.53□□□□□ -0.4
TRIM39-204ENST00000396548 OVGP1Q12889 678 aa12.53□□□□□ -0.4
TRIM39-204ENST00000396548 TMEM115Q12893 351 aaPredicted RBP12.53□□□□□ -0.4
TRIM39-204ENST00000396548 TSNQ15631 228 aaKnown RBP12.53□□□□□ -0.4
TRIM39-204ENST00000396548 BCL7AQ4VC05 210 aa12.53□□□□□ -0.4
TRIM39-204ENST00000396548 STAG3L4Q8TBR4 150 aa12.53□□□□□ -0.4
TRIM39-204ENST00000396548 NEMP1O14524 444 aa12.52□□□□□ -0.41
TRIM39-204ENST00000396548 LZTS3O60299 673 aaPredicted RBP12.52□□□□□ -0.41
TRIM39-204ENST00000396548 NPHS1O60500 1241 aa12.52□□□□□ -0.41
TRIM39-204ENST00000396548 TM7SF2O76062 418 aa12.52□□□□□ -0.41
TRIM39-204ENST00000396548 IMPDH1P20839 514 aa12.52□□□□□ -0.41
TRIM39-204ENST00000396548 CTSCP53634 463 aa12.52□□□□□ -0.41
TRIM39-204ENST00000396548 ZNF852Q6ZMS4 543 aa12.52□□□□□ -0.41
TRIM39-204ENST00000396548 Q6ZS52 159 aa12.52□□□□□ -0.41
TRIM39-204ENST00000396548 DET1Q7L5Y6 550 aa12.52□□□□□ -0.41
TRIM39-204ENST00000396548 PIWIL4Q7Z3Z4 852 aaKnown RBP12.52□□□□□ -0.41
TRIM39-204ENST00000396548 PHYKPLQ8IUZ5 450 aa12.52□□□□□ -0.41
TRIM39-204ENST00000396548 CCDC126Q96EE4 140 aa12.52□□□□□ -0.41
TRIM39-204ENST00000396548 PANX3Q96QZ0 392 aa12.52□□□□□ -0.41
TRIM39-204ENST00000396548 C1QTNF3Q9BXJ4 246 aa12.52□□□□□ -0.41
TRIM39-204ENST00000396548 PREBQ9HCU5 417 aa12.52□□□□□ -0.41
TRIM39-204ENST00000396548 F5P12259 2224 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms