RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 RANBP10Q6VN20 620 aa13.53□□□□□ -0.24
CXCL12-205ENST00000395794 AMZ2Q86W34 360 aa13.53□□□□□ -0.24
CXCL12-205ENST00000395794 PLXDC1Q8IUK5 500 aa13.53□□□□□ -0.24
CXCL12-205ENST00000395794 TMEM139Q8IV31 216 aa13.53□□□□□ -0.24
CXCL12-205ENST00000395794 ZSCAN1Q8NBB4 408 aa13.53□□□□□ -0.24
CXCL12-205ENST00000395794 CXorf40BQ96DE9 158 aa13.53□□□□□ -0.24
CXCL12-205ENST00000395794 ZNF514Q96K75 400 aaPredicted RBP13.53□□□□□ -0.24
CXCL12-205ENST00000395794 BBC3Q96PG8 261 aaPredicted RBP13.53□□□□□ -0.24
CXCL12-205ENST00000395794 APOL2Q9BQE5 337 aa13.53□□□□□ -0.24
CXCL12-205ENST00000395794 UCK1Q9HA47 277 aa13.53□□□□□ -0.24
CXCL12-205ENST00000395794 UGT1A7Q9HAW7 530 aa13.53□□□□□ -0.24
CXCL12-205ENST00000395794 UGT1A10Q9HAW8 530 aa13.53□□□□□ -0.24
CXCL12-205ENST00000395794 UGT1A8Q9HAW9 530 aa13.53□□□□□ -0.24
CXCL12-205ENST00000395794 SLC39A1Q9NY26 324 aa13.53□□□□□ -0.24
CXCL12-205ENST00000395794 TMEM9Q9P0T7 183 aa13.53□□□□□ -0.24
CXCL12-205ENST00000395794 TRIM10Q9UDY6 481 aa13.53□□□□□ -0.24
CXCL12-205ENST00000395794 FEZ2Q9UHY8 353 aaPredicted RBP13.53□□□□□ -0.24
CXCL12-205ENST00000395794 TMPRSS11EQ9UL52 423 aa13.53□□□□□ -0.24
CXCL12-205ENST00000395794 PACSIN2Q9UNF0 486 aaPredicted RBP13.53□□□□□ -0.24
CXCL12-205ENST00000395794 ARL5AQ9Y689 179 aa13.53□□□□□ -0.24
CXCL12-205ENST00000395794 LILRA5A6NI73 299 aa13.52□□□□□ -0.25
CXCL12-205ENST00000395794 EFCAB7A8K855 629 aa13.52□□□□□ -0.25
CXCL12-205ENST00000395794 B4E171 279 aa13.52□□□□□ -0.25
CXCL12-205ENST00000395794 C9orf172C9J069 976 aa13.52□□□□□ -0.25
CXCL12-205ENST00000395794 STMND1H3BQB6 276 aa13.52□□□□□ -0.25
CXCL12-205ENST00000395794 K7ENP7 123 aa13.52□□□□□ -0.25
CXCL12-205ENST00000395794 POP7O75817 140 aaKnown RBP13.52□□□□□ -0.25
CXCL12-205ENST00000395794 RALBP11234 206 aa13.52□□□□□ -0.25
CXCL12-205ENST00000395794 FGF3P11487 239 aaPredicted RBP13.52□□□□□ -0.25
CXCL12-205ENST00000395794 AMD1P17707 334 aa13.52□□□□□ -0.25
CXCL12-205ENST00000395794 RPL10P27635 214 aaKnown RBP13.52□□□□□ -0.25
CXCL12-205ENST00000395794 TSPAN7P41732 249 aa13.52□□□□□ -0.25
CXCL12-205ENST00000395794 GSDMDP57764 484 aa13.52□□□□□ -0.25
CXCL12-205ENST00000395794 UBE2IP63279 158 aaKnown RBP13.52□□□□□ -0.25
CXCL12-205ENST00000395794 CFHR1Q03591 330 aa13.52□□□□□ -0.25
CXCL12-205ENST00000395794 TGIF1Q15583 401 aa13.52□□□□□ -0.25
CXCL12-205ENST00000395794 PARP6Q2NL67 630 aa13.52□□□□□ -0.25
CXCL12-205ENST00000395794 KHDC1Q4VXA5 237 aaKnown RBP13.52□□□□□ -0.25
CXCL12-205ENST00000395794 GPRC6AQ5T6X5 926 aa13.52□□□□□ -0.25
CXCL12-205ENST00000395794 AGAP9Q5VTM2 703 aa13.52□□□□□ -0.25
CXCL12-205ENST00000395794 INO80CQ6PI98 192 aaPredicted RBP13.52□□□□□ -0.25
CXCL12-205ENST00000395794 TMEM220Q6QAJ8 160 aa13.52□□□□□ -0.25
CXCL12-205ENST00000395794 ABRAXAS1Q6UWZ7 409 aa13.52□□□□□ -0.25
CXCL12-205ENST00000395794 WASH2PQ6VEQ5 465 aa13.52□□□□□ -0.25
CXCL12-205ENST00000395794 ZFAND4Q86XD8 727 aa13.52□□□□□ -0.25
CXCL12-205ENST00000395794 ZNF547Q8IVP9 402 aa13.52□□□□□ -0.25
CXCL12-205ENST00000395794 RBM12BQ8IXT5 1001 aaKnown RBP13.52□□□□□ -0.25
CXCL12-205ENST00000395794 RASGEF1AQ8N9B8 481 aa13.52□□□□□ -0.25
CXCL12-205ENST00000395794 FAM71DQ8N9W8 422 aa13.52□□□□□ -0.25
CXCL12-205ENST00000395794 DDHD1Q8NEL9 900 aa13.52□□□□□ -0.25
CXCL12-205ENST00000395794 OR4K2Q8NGD2 314 aa13.52□□□□□ -0.25
CXCL12-205ENST00000395794 SNRNP27Q8WVK2 155 aaKnown RBP13.52□□□□□ -0.25
CXCL12-205ENST00000395794 UBE2Q2Q8WVN8 375 aa13.52□□□□□ -0.25
CXCL12-205ENST00000395794 ART4Q93070 314 aa13.52□□□□□ -0.25
CXCL12-205ENST00000395794 DCUN1D1Q96GG9 259 aa13.52□□□□□ -0.25
CXCL12-205ENST00000395794 TBL1YQ9BQ87 522 aa13.52□□□□□ -0.25
CXCL12-205ENST00000395794 DDA1Q9BW61 102 aa13.52□□□□□ -0.25
CXCL12-205ENST00000395794 TBC1D10AQ9BXI6 508 aa13.52□□□□□ -0.25
CXCL12-205ENST00000395794 ASB8Q9H765 288 aa13.52□□□□□ -0.25
CXCL12-205ENST00000395794 WASH6PQ9NQA3 447 aa13.52□□□□□ -0.25
CXCL12-205ENST00000395794 POT1Q9NUX5 634 aa13.52□□□□□ -0.25
CXCL12-205ENST00000395794 SMOXQ9NWM0 555 aa13.52□□□□□ -0.25
CXCL12-205ENST00000395794 FOXJ2Q9P0K8 574 aa13.52□□□□□ -0.25
CXCL12-205ENST00000395794 PDP2Q9P2J9 529 aa13.52□□□□□ -0.25
CXCL12-205ENST00000395794 KLHL3Q9UH77 587 aa13.52□□□□□ -0.25
CXCL12-205ENST00000395794 PCDHGA3Q9Y5H0 932 aa13.52□□□□□ -0.25
CXCL12-205ENST00000395794 DNMT3AQ9Y6K1 912 aaPredicted RBP13.52□□□□□ -0.25
CXCL12-205ENST00000395794 PSMD3O43242 534 aa13.51□□□□□ -0.25
CXCL12-205ENST00000395794 KRT86O43790 486 aa13.51□□□□□ -0.25
CXCL12-205ENST00000395794 SRP72O76094 671 aaKnown RBP13.51□□□□□ -0.25
CXCL12-205ENST00000395794 UBXN7O94888 489 aa13.51□□□□□ -0.25
CXCL12-205ENST00000395794 ADRA1AP35348 466 aa13.51□□□□□ -0.25
CXCL12-205ENST00000395794 HADHAP40939 763 aa13.51□□□□□ -0.25
CXCL12-205ENST00000395794 SLC19A1P41440 591 aa13.51□□□□□ -0.25
CXCL12-205ENST00000395794 ATP1A2P50993 1020 aa13.51□□□□□ -0.25
CXCL12-205ENST00000395794 DRG2P55039 364 aaKnown RBP13.51□□□□□ -0.25
CXCL12-205ENST00000395794 COL9A2Q14055 689 aaPredicted RBP13.51□□□□□ -0.25
CXCL12-205ENST00000395794 P3H1Q32P28 736 aa13.51□□□□□ -0.25
CXCL12-205ENST00000395794 FNBP1LQ5T0N5 605 aa13.51□□□□□ -0.25
CXCL12-205ENST00000395794 SEL1L2Q5TEA6 688 aa13.51□□□□□ -0.25
CXCL12-205ENST00000395794 TMEM26Q6ZUK4 368 aa13.51□□□□□ -0.25
CXCL12-205ENST00000395794 BEND7Q8N7W2 519 aaPredicted RBP13.51□□□□□ -0.25
CXCL12-205ENST00000395794 ULK4Q96C45 1275 aa13.51□□□□□ -0.25
CXCL12-205ENST00000395794 ALS2CR12Q96Q35 445 aa13.51□□□□□ -0.25
CXCL12-205ENST00000395794 TEFMQ96QE5 360 aaKnown RBP13.51□□□□□ -0.25
CXCL12-205ENST00000395794 GORASP1Q9BQQ3 440 aa13.51□□□□□ -0.25
CXCL12-205ENST00000395794 SCHIP1Q9P0W5 487 aaPredicted RBP13.51□□□□□ -0.25
CXCL12-205ENST00000395794 ZNF624Q9P2J8 865 aaPredicted RBP13.51□□□□□ -0.25
CXCL12-205ENST00000395794 CRLS1Q9UJA2 301 aa13.51□□□□□ -0.25
CXCL12-205ENST00000395794 CACNA1GO43497 2377 aa13.51□□□□□ -0.25
CXCL12-205ENST00000395794 IGSF10Q6WRI0 2623 aa13.5□□□□□ -0.25
CXCL12-205ENST00000395794 KLHL33A6NCF5 533 aa13.5□□□□□ -0.25
CXCL12-205ENST00000395794 OR2AG2A6NM03 316 aa13.5□□□□□ -0.25
CXCL12-205ENST00000395794 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.5□□□□□ -0.25
CXCL12-205ENST00000395794 CFAP99D6REC4 459 aa13.5□□□□□ -0.25
CXCL12-205ENST00000395794 TYRP1P17643 537 aa13.5□□□□□ -0.25
CXCL12-205ENST00000395794 ITGALP20701 1170 aa13.5□□□□□ -0.25
CXCL12-205ENST00000395794 C19orf57Q0VDD7 668 aa13.5□□□□□ -0.25
CXCL12-205ENST00000395794 SPARCL1Q14515 664 aa13.5□□□□□ -0.25
CXCL12-205ENST00000395794 PTPRCAPQ14761 206 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms