RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 ATG14Q6ZNE5 492 aa19.08■□□□□ 0.65
LMNB1-202ENST00000395354 RBFAQ8N0V3 343 aa19.08■□□□□ 0.65
LMNB1-202ENST00000395354 PGBD3Q8N328 593 aa19.08■□□□□ 0.65
LMNB1-202ENST00000395354 TMEM105Q8N8V8 129 aa19.08■□□□□ 0.65
LMNB1-202ENST00000395354 PLEKHG4BQ96PX9 1271 aa19.08■□□□□ 0.65
LMNB1-202ENST00000395354 CDH19Q9H159 772 aa19.08■□□□□ 0.65
LMNB1-202ENST00000395354 ASB8Q9H765 288 aa19.08■□□□□ 0.65
LMNB1-202ENST00000395354 C16orf96A6NNT2 1141 aa19.07■□□□□ 0.64
LMNB1-202ENST00000395354 AGAP14A8MT82 685 aa19.07■□□□□ 0.64
LMNB1-202ENST00000395354 SLCO1B7G3V0H7 640 aa19.07■□□□□ 0.64
LMNB1-202ENST00000395354 MID1O15344 667 aa19.07■□□□□ 0.64
LMNB1-202ENST00000395354 HNRNPCL1O60812 293 aaKnown RBP19.07■□□□□ 0.64
LMNB1-202ENST00000395354 UNC5CO95185 931 aa19.07■□□□□ 0.64
LMNB1-202ENST00000395354 DNTTP04053 509 aa19.07■□□□□ 0.64
LMNB1-202ENST00000395354 C7P10643 843 aa19.07■□□□□ 0.64
LMNB1-202ENST00000395354 NDUFV2P19404 249 aa19.07■□□□□ 0.64
LMNB1-202ENST00000395354 C5AR1P21730 350 aa19.07■□□□□ 0.64
LMNB1-202ENST00000395354 SERPINB3P29508 390 aa19.07■□□□□ 0.64
LMNB1-202ENST00000395354 LIG3P49916 1009 aa19.07■□□□□ 0.64
LMNB1-202ENST00000395354 METAP1P53582 386 aa19.07■□□□□ 0.64
LMNB1-202ENST00000395354 LRRC66Q68CR7 880 aa19.07■□□□□ 0.64
LMNB1-202ENST00000395354 ANO7Q6IWH7 933 aa19.07■□□□□ 0.64
LMNB1-202ENST00000395354 TSPAN33Q86UF1 283 aa19.07■□□□□ 0.64
LMNB1-202ENST00000395354 SERPINA9Q86WD7 417 aa19.07■□□□□ 0.64
LMNB1-202ENST00000395354 CAMKK1Q8N5S9 505 aa19.07■□□□□ 0.64
LMNB1-202ENST00000395354 KIAA1191Q96A73 305 aa19.07■□□□□ 0.64
LMNB1-202ENST00000395354 ARRDC3Q96B67 414 aa19.07■□□□□ 0.64
LMNB1-202ENST00000395354 PPP1R16AQ96I34 528 aa19.07■□□□□ 0.64
LMNB1-202ENST00000395354 ALG9Q9H6U8 611 aa19.07■□□□□ 0.64
LMNB1-202ENST00000395354 DYRK4Q9NR20 520 aa19.07■□□□□ 0.64
LMNB1-202ENST00000395354 PNPOQ9NVS9 261 aa19.07■□□□□ 0.64
LMNB1-202ENST00000395354 APOBEC2Q9Y235 224 aaKnown RBP19.07■□□□□ 0.64
LMNB1-202ENST00000395354 CUL9Q8IWT3 2517 aa19.07■□□□□ 0.64
LMNB1-202ENST00000395354 SCN8AQ9UQD0 1980 aa19.06■□□□□ 0.64
LMNB1-202ENST00000395354 A8MT66 165 aa19.06■□□□□ 0.64
LMNB1-202ENST00000395354 OR1I1O60431 355 aa19.06■□□□□ 0.64
LMNB1-202ENST00000395354 SMIM24O75264 130 aa19.06■□□□□ 0.64
LMNB1-202ENST00000395354 APBB3O95704 486 aa19.06■□□□□ 0.64
LMNB1-202ENST00000395354 TPBGLP0DKB5 382 aa19.06■□□□□ 0.64
LMNB1-202ENST00000395354 ITGB7P26010 798 aa19.06■□□□□ 0.64
LMNB1-202ENST00000395354 ACRV1P26436 265 aa19.06■□□□□ 0.64
LMNB1-202ENST00000395354 NCALDP61601 193 aa19.06■□□□□ 0.64
LMNB1-202ENST00000395354 PTSQ03393 145 aa19.06■□□□□ 0.64
LMNB1-202ENST00000395354 GALNT1Q10472 559 aaPredicted RBP19.06■□□□□ 0.64
LMNB1-202ENST00000395354 PAQR3Q6TCH7 311 aa19.06■□□□□ 0.64
LMNB1-202ENST00000395354 KIAA1324Q6UXG2 1013 aaKnown RBP19.06■□□□□ 0.64
LMNB1-202ENST00000395354 KIRREL3Q8IZU9 778 aa19.06■□□□□ 0.64
LMNB1-202ENST00000395354 DTX3LQ8TDB6 740 aa19.06■□□□□ 0.64
LMNB1-202ENST00000395354 GPR21Q99679 349 aa19.06■□□□□ 0.64
LMNB1-202ENST00000395354 TRMT6Q9UJA5 497 aaKnown RBP19.06■□□□□ 0.64
LMNB1-202ENST00000395354 SCML1Q9UN30 329 aa19.06■□□□□ 0.64
LMNB1-202ENST00000395354 FNDC3AQ9Y2H6 1198 aaKnown RBP19.06■□□□□ 0.64
LMNB1-202ENST00000395354 CFAP73A6NFT4 308 aa19.06■□□□□ 0.64
LMNB1-202ENST00000395354 ZNF195O14628 629 aa19.06■□□□□ 0.64
LMNB1-202ENST00000395354 ZBTB14O43829 449 aa19.06■□□□□ 0.64
LMNB1-202ENST00000395354 ACADMP11310 421 aa19.06■□□□□ 0.64
LMNB1-202ENST00000395354 VIPR1P32241 457 aa19.06■□□□□ 0.64
LMNB1-202ENST00000395354 RPL14P50914 215 aaKnown RBP19.06■□□□□ 0.64
LMNB1-202ENST00000395354 KRT72Q14CN4 511 aa19.06■□□□□ 0.64
LMNB1-202ENST00000395354 CHRNA6Q15825 494 aa19.06■□□□□ 0.64
LMNB1-202ENST00000395354 ARL13AQ5H913 290 aaPredicted RBP19.06■□□□□ 0.64
LMNB1-202ENST00000395354 CFAP157Q5JU67 520 aa19.06■□□□□ 0.64
LMNB1-202ENST00000395354 TTC7BQ86TV6 843 aa19.06■□□□□ 0.64
LMNB1-202ENST00000395354 AADATQ8N5Z0 425 aa19.06■□□□□ 0.64
LMNB1-202ENST00000395354 ZNF781Q8N8C0 355 aa19.06■□□□□ 0.64
LMNB1-202ENST00000395354 STAG3L4Q8TBR4 150 aa19.06■□□□□ 0.64
LMNB1-202ENST00000395354 PTERQ96BW5 349 aa19.06■□□□□ 0.64
LMNB1-202ENST00000395354 ULK4Q96C45 1275 aa19.06■□□□□ 0.64
LMNB1-202ENST00000395354 L3HYPDHQ96EM0 354 aa19.06■□□□□ 0.64
LMNB1-202ENST00000395354 SGF29Q96ES7 293 aa19.06■□□□□ 0.64
LMNB1-202ENST00000395354 TRMOQ9BU70 441 aa19.06■□□□□ 0.64
LMNB1-202ENST00000395354 UNKQ9C0B0 810 aaKnown RBP19.06■□□□□ 0.64
LMNB1-202ENST00000395354 CLPBQ9H078 707 aa19.06■□□□□ 0.64
LMNB1-202ENST00000395354 RAD18Q9NS91 495 aa19.06■□□□□ 0.64
LMNB1-202ENST00000395354 B4GALT6Q9UBX8 382 aa19.06■□□□□ 0.64
LMNB1-202ENST00000395354 VTI1BQ9UEU0 232 aa19.06■□□□□ 0.64
LMNB1-202ENST00000395354 GNPTGQ9UJJ9 305 aa19.06■□□□□ 0.64
LMNB1-202ENST00000395354 FAM86C2PA6NEL3 165 aa19.05■□□□□ 0.64
LMNB1-202ENST00000395354 UPK3BL1B0FP48 263 aa19.05■□□□□ 0.64
LMNB1-202ENST00000395354 E5RI56 91 aa19.05■□□□□ 0.64
LMNB1-202ENST00000395354 UPK3BL2E5RIL1 263 aa19.05■□□□□ 0.64
LMNB1-202ENST00000395354 PLK4O00444 970 aa19.05■□□□□ 0.64
LMNB1-202ENST00000395354 HGSO14964 777 aaPredicted RBP19.05■□□□□ 0.64
LMNB1-202ENST00000395354 SERPINA6P08185 405 aa19.05■□□□□ 0.64
LMNB1-202ENST00000395354 TIMP2P16035 220 aa19.05■□□□□ 0.64
LMNB1-202ENST00000395354 IMPDH1P20839 514 aa19.05■□□□□ 0.64
LMNB1-202ENST00000395354 LHCGRP22888 699 aa19.05■□□□□ 0.64
LMNB1-202ENST00000395354 AVPR2P30518 371 aa19.05■□□□□ 0.64
LMNB1-202ENST00000395354 IL2P60568 153 aa19.05■□□□□ 0.64
LMNB1-202ENST00000395354 CNTN1Q12860 1018 aa19.05■□□□□ 0.64
LMNB1-202ENST00000395354 SFSWAPQ12872 951 aaKnown RBP19.05■□□□□ 0.64
LMNB1-202ENST00000395354 ARHGEF7Q14155 803 aa19.05■□□□□ 0.64
LMNB1-202ENST00000395354 TTC31Q49AM3 519 aaPredicted RBP19.05■□□□□ 0.64
LMNB1-202ENST00000395354 FBXL19Q6PCT2 694 aa19.05■□□□□ 0.64
LMNB1-202ENST00000395354 ERN2Q76MJ5 926 aaKnown RBP19.05■□□□□ 0.64
LMNB1-202ENST00000395354 HDDC3Q8N4P3 179 aa19.05■□□□□ 0.64
LMNB1-202ENST00000395354 DTWD2Q8NBA8 298 aa19.05■□□□□ 0.64
LMNB1-202ENST00000395354 GPR26Q8NDV2 337 aa19.05■□□□□ 0.64
LMNB1-202ENST00000395354 CD200R1Q8TD46 325 aa19.05■□□□□ 0.64
LMNB1-202ENST00000395354 GANCQ8TET4 914 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms