RNA–Protein interactions for RNA: ENST00000394081.7

RARA-202, Transcript of retinoic acid receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene RARA, Length 2,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-202ENST00000394081 ATAD3BQ5T9A4 648 aa22.53■■□□□ 1.2
RARA-202ENST00000394081 PIM3Q86V86 326 aa22.53■■□□□ 1.2
RARA-202ENST00000394081 SVOPQ8N4V2 548 aa22.53■■□□□ 1.2
RARA-202ENST00000394081 NDNFQ8TB73 568 aa22.53■■□□□ 1.2
RARA-202ENST00000394081 GLMNQ92990 594 aa22.53■■□□□ 1.2
RARA-202ENST00000394081 EXT2Q93063 718 aa22.53■■□□□ 1.2
RARA-202ENST00000394081 REXO5Q96IC2 774 aaKnown RBP22.53■■□□□ 1.2
RARA-202ENST00000394081 BTBD2Q9BX70 525 aa22.53■■□□□ 1.2
RARA-202ENST00000394081 HOXD1Q9GZZ0 328 aa22.53■■□□□ 1.2
RARA-202ENST00000394081 ZNF229Q9UJW7 825 aa22.53■■□□□ 1.2
RARA-202ENST00000394081 TESMINQ9Y4I5 508 aa22.53■■□□□ 1.2
RARA-202ENST00000394081 RPS17P08708 135 aaKnown RBP22.52■■□□□ 1.2
RARA-202ENST00000394081 JUNDP17535 347 aa22.52■■□□□ 1.2
RARA-202ENST00000394081 AGXTP21549 392 aa22.52■■□□□ 1.2
RARA-202ENST00000394081 CXCR4P61073 352 aa22.52■■□□□ 1.2
RARA-202ENST00000394081 CDC42EP1Q00587 391 aa22.52■■□□□ 1.2
RARA-202ENST00000394081 MVKQ03426 396 aa22.52■■□□□ 1.2
RARA-202ENST00000394081 ZNF181Q2M3W8 571 aa22.52■■□□□ 1.2
RARA-202ENST00000394081 NECAB2Q7Z6G3 386 aa22.52■■□□□ 1.2
RARA-202ENST00000394081 GIPC2Q8TF65 315 aa22.52■■□□□ 1.2
RARA-202ENST00000394081 PEX13Q92968 403 aa22.52■■□□□ 1.2
RARA-202ENST00000394081 ATXN3LQ9H3M9 355 aa22.52■■□□□ 1.2
RARA-202ENST00000394081 SMURF2Q9HAU4 748 aa22.52■■□□□ 1.2
RARA-202ENST00000394081 HSPE1-MOB4S4R3N1 261 aa22.52■■□□□ 1.2
RARA-202ENST00000394081 MN1Q10571 1320 aaPredicted RBP22.52■■□□□ 1.2
RARA-202ENST00000394081 CST1P01037 141 aa22.52■■□□□ 1.2
RARA-202ENST00000394081 USP17L7P0C7H9 530 aa22.52■■□□□ 1.2
RARA-202ENST00000394081 ITGAMP11215 1152 aa22.52■■□□□ 1.2
RARA-202ENST00000394081 BHLHA9Q7RTU4 235 aa22.52■■□□□ 1.2
RARA-202ENST00000394081 SETD9Q8NE22 299 aa22.52■■□□□ 1.2
RARA-202ENST00000394081 GPR150Q8NGU9 434 aa22.52■■□□□ 1.2
RARA-202ENST00000394081 OR5K1Q8NHB7 308 aa22.52■■□□□ 1.2
RARA-202ENST00000394081 STAG3L4Q8TBR4 150 aa22.52■■□□□ 1.2
RARA-202ENST00000394081 KIAA1191Q96A73 305 aa22.52■■□□□ 1.2
RARA-202ENST00000394081 SMOQ99835 787 aa22.52■■□□□ 1.2
RARA-202ENST00000394081 SLC39A8Q9C0K1 460 aa22.52■■□□□ 1.2
RARA-202ENST00000394081 NXF3Q9H4D5 531 aaKnown RBP22.52■■□□□ 1.2
RARA-202ENST00000394081 EPS8L2Q9H6S3 715 aa22.52■■□□□ 1.2
RARA-202ENST00000394081 SYCE1LA8MT33 242 aa22.51■■□□□ 1.19
RARA-202ENST00000394081 TAF4O00268 1085 aa22.51■■□□□ 1.19
RARA-202ENST00000394081 UPK1BO75841 260 aa22.51■■□□□ 1.19
RARA-202ENST00000394081 SEC24AO95486 1093 aa22.51■■□□□ 1.19
RARA-202ENST00000394081 MLYCDO95822 493 aa22.51■■□□□ 1.19
RARA-202ENST00000394081 CASP2P42575 452 aa22.51■■□□□ 1.19
RARA-202ENST00000394081 NEK2P51955 445 aa22.51■■□□□ 1.19
RARA-202ENST00000394081 PIGFQ07326 219 aa22.51■■□□□ 1.19
RARA-202ENST00000394081 SF3B4Q15427 424 aaKnown RBP eCLIP22.51■■□□□ 1.19
RARA-202ENST00000394081 AFMIDQ63HM1 303 aa22.51■■□□□ 1.19
RARA-202ENST00000394081 OR6P1Q8NGX9 317 aa22.51■■□□□ 1.19
RARA-202ENST00000394081 PROKR1Q8TCW9 393 aa22.51■■□□□ 1.19
RARA-202ENST00000394081 DSN1Q9H410 356 aa22.51■■□□□ 1.19
RARA-202ENST00000394081 FNIP2Q9P278 1114 aa22.51■■□□□ 1.19
RARA-202ENST00000394081 VPS51Q9UID3 782 aa22.51■■□□□ 1.19
RARA-202ENST00000394081 TPRKBQ9Y3C4 175 aa22.51■■□□□ 1.19
RARA-202ENST00000394081 MIA3Q5JRA6 1907 aa22.51■■□□□ 1.19
RARA-202ENST00000394081 LRRC14BA6NHZ5 514 aa22.51■■□□□ 1.19
RARA-202ENST00000394081 STX16O14662 325 aa22.51■■□□□ 1.19
RARA-202ENST00000394081 PGK2P07205 417 aa22.51■■□□□ 1.19
RARA-202ENST00000394081 ALDH7A1P49419 539 aaKnown RBP22.51■■□□□ 1.19
RARA-202ENST00000394081 CDK5R2Q13319 367 aa22.51■■□□□ 1.19
RARA-202ENST00000394081 AGMOQ6ZNB7 445 aa22.51■■□□□ 1.19
RARA-202ENST00000394081 TAC4Q86UU9 113 aa22.51■■□□□ 1.19
RARA-202ENST00000394081 SNX29P2Q8IUI4 249 aa22.51■■□□□ 1.19
RARA-202ENST00000394081 APOBEC3FQ8IUX4 373 aaKnown RBP22.51■■□□□ 1.19
RARA-202ENST00000394081 ADHFE1Q8IWW8 467 aa22.51■■□□□ 1.19
RARA-202ENST00000394081 FBXO39Q8N4B4 442 aa22.51■■□□□ 1.19
RARA-202ENST00000394081 KIAA1958Q8N8K9 716 aa22.51■■□□□ 1.19
RARA-202ENST00000394081 FATE1Q969F0 183 aa22.51■■□□□ 1.19
RARA-202ENST00000394081 IMP4Q96G21 291 aaKnown RBP22.51■■□□□ 1.19
RARA-202ENST00000394081 DACH2Q96NX9 599 aa22.51■■□□□ 1.19
RARA-202ENST00000394081 TRIM62Q9BVG3 475 aa22.51■■□□□ 1.19
RARA-202ENST00000394081 SLIRPQ9GZT3 109 aaKnown RBP22.51■■□□□ 1.19
RARA-202ENST00000394081 CCDC90BQ9GZT6 254 aa22.51■■□□□ 1.19
RARA-202ENST00000394081 DUSP21Q9H596 190 aa22.51■■□□□ 1.19
RARA-202ENST00000394081 KLQ9UEF7 1012 aa22.51■■□□□ 1.19
RARA-202ENST00000394081 PTGES3LE9PB15 166 aa22.5■■□□□ 1.19
RARA-202ENST00000394081 LSM1O15116 133 aaKnown RBP22.5■■□□□ 1.19
RARA-202ENST00000394081 PRKD3O94806 890 aa22.5■■□□□ 1.19
RARA-202ENST00000394081 IL12AP29459 219 aa22.5■■□□□ 1.19
RARA-202ENST00000394081 TIAL1Q01085 375 aaKnown RBP eCLIP22.5■■□□□ 1.19
RARA-202ENST00000394081 ACVR1Q04771 509 aa22.5■■□□□ 1.19
RARA-202ENST00000394081 FADDQ13158 208 aa22.5■■□□□ 1.19
RARA-202ENST00000394081 PWP1Q13610 501 aa22.5■■□□□ 1.19
RARA-202ENST00000394081 MANEALQ5VSG8 457 aa22.5■■□□□ 1.19
RARA-202ENST00000394081 SAMD7Q7Z3H4 446 aa22.5■■□□□ 1.19
RARA-202ENST00000394081 SPNS2Q8IVW8 549 aa22.5■■□□□ 1.19
RARA-202ENST00000394081 EID3Q8N140 333 aa22.5■■□□□ 1.19
RARA-202ENST00000394081 RNF34Q969K3 372 aa22.5■■□□□ 1.19
RARA-202ENST00000394081 SIAEQ9HAT2 523 aa22.5■■□□□ 1.19
RARA-202ENST00000394081 HEBP1Q9NRV9 189 aa22.5■■□□□ 1.19
RARA-202ENST00000394081 RBMX2Q9Y388 322 aaKnown RBP22.5■■□□□ 1.19
RARA-202ENST00000394081 ORC6Q9Y5N6 252 aa22.5■■□□□ 1.19
RARA-202ENST00000394081 PTCH2Q9Y6C5 1203 aa22.5■■□□□ 1.19
RARA-202ENST00000394081 ASNA1O43681 348 aa22.5■■□□□ 1.19
RARA-202ENST00000394081 SLC2A3P11169 496 aa22.5■■□□□ 1.19
RARA-202ENST00000394081 PCNAP12004 261 aa22.5■■□□□ 1.19
RARA-202ENST00000394081 SOX11P35716 441 aa22.5■■□□□ 1.19
RARA-202ENST00000394081 ST13P50502 369 aaKnown RBP22.5■■□□□ 1.19
RARA-202ENST00000394081 BRMS1LQ5PSV4 323 aa22.5■■□□□ 1.19
RARA-202ENST00000394081 ZNF549Q6P9A3 640 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms