RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 LTBRP36941 435 aa14.78□□□□□ -0.04
MKS1-202ENST00000393119 DNAJB13P59910 316 aa14.78□□□□□ -0.04
MKS1-202ENST00000393119 IL2P60568 153 aa14.78□□□□□ -0.04
MKS1-202ENST00000393119 ADAM15Q13444 863 aa14.78□□□□□ -0.04
MKS1-202ENST00000393119 LSM12Q3MHD2 195 aaKnown RBP14.78□□□□□ -0.04
MKS1-202ENST00000393119 ZNF805Q5CZA5 627 aa14.78□□□□□ -0.04
MKS1-202ENST00000393119 MMAAQ8IVH4 418 aaKnown RBP14.78□□□□□ -0.04
MKS1-202ENST00000393119 TERB1Q8NA31 727 aa14.78□□□□□ -0.04
MKS1-202ENST00000393119 TRPC4APQ8TEL6 797 aa14.78□□□□□ -0.04
MKS1-202ENST00000393119 SREK1Q8WXA9 508 aaKnown RBP14.78□□□□□ -0.04
MKS1-202ENST00000393119 FAM161BQ96MY7 647 aa14.78□□□□□ -0.04
MKS1-202ENST00000393119 FAM129BQ96TA1 746 aa14.78□□□□□ -0.04
MKS1-202ENST00000393119 SEMA4BQ9NPR2 832 aaPredicted RBP14.78□□□□□ -0.04
MKS1-202ENST00000393119 TCF20Q9UGU0 1960 aaKnown RBP14.78□□□□□ -0.04
MKS1-202ENST00000393119 UPK3BL1B0FP48 263 aa14.78□□□□□ -0.04
MKS1-202ENST00000393119 UPK3BL2E5RIL1 263 aa14.78□□□□□ -0.04
MKS1-202ENST00000393119 PAPLNO95428 1278 aa14.78□□□□□ -0.04
MKS1-202ENST00000393119 GUCA1CO95843 209 aa14.78□□□□□ -0.04
MKS1-202ENST00000393119 LAMP2P13473 410 aa14.78□□□□□ -0.04
MKS1-202ENST00000393119 ZNF7P17097 686 aaPredicted RBP14.78□□□□□ -0.04
MKS1-202ENST00000393119 ATP6V1C1P21283 382 aa14.78□□□□□ -0.04
MKS1-202ENST00000393119 SEC13P55735 322 aa14.78□□□□□ -0.04
MKS1-202ENST00000393119 ARHGEF7Q14155 803 aa14.78□□□□□ -0.04
MKS1-202ENST00000393119 RBBP5Q15291 538 aaKnown RBP14.78□□□□□ -0.04
MKS1-202ENST00000393119 AARS2Q5JTZ9 985 aaKnown RBP14.78□□□□□ -0.04
MKS1-202ENST00000393119 ATAT1Q5SQI0 421 aa14.78□□□□□ -0.04
MKS1-202ENST00000393119 CWF19L1Q69YN2 538 aaKnown RBP14.78□□□□□ -0.04
MKS1-202ENST00000393119 NXNQ6DKJ4 435 aa14.78□□□□□ -0.04
MKS1-202ENST00000393119 MBOAT1Q6ZNC8 495 aa14.78□□□□□ -0.04
MKS1-202ENST00000393119 FRMD7Q6ZUT3 714 aa14.78□□□□□ -0.04
MKS1-202ENST00000393119 ZFAND2BQ8WV99 257 aa14.78□□□□□ -0.04
MKS1-202ENST00000393119 SLC45A3Q96JT2 553 aa14.78□□□□□ -0.04
MKS1-202ENST00000393119 TBC1D10AQ9BXI6 508 aa14.78□□□□□ -0.04
MKS1-202ENST00000393119 TFB2MQ9H5Q4 396 aaKnown RBP14.78□□□□□ -0.04
MKS1-202ENST00000393119 SYTL2Q9HCH5 934 aa14.78□□□□□ -0.04
MKS1-202ENST00000393119 DZANK1Q9NVP4 752 aa14.78□□□□□ -0.04
MKS1-202ENST00000393119 DNAJC28Q9NX36 388 aa14.78□□□□□ -0.04
MKS1-202ENST00000393119 ZMYM5Q9UJ78 669 aa14.78□□□□□ -0.04
MKS1-202ENST00000393119 DHRS7Q9Y394 339 aa14.78□□□□□ -0.04
MKS1-202ENST00000393119 SCN8AQ9UQD0 1980 aa14.77□□□□□ -0.04
MKS1-202ENST00000393119 K7ESM1 405 aa14.77□□□□□ -0.04
MKS1-202ENST00000393119 INPP4BO15327 924 aa14.77□□□□□ -0.04
MKS1-202ENST00000393119 MAP3K13O43283 966 aa14.77□□□□□ -0.04
MKS1-202ENST00000393119 PYGLP06737 847 aa14.77□□□□□ -0.04
MKS1-202ENST00000393119 KPNA2P52292 529 aaKnown RBP14.77□□□□□ -0.04
MKS1-202ENST00000393119 FCHO2Q0JRZ9 810 aa14.77□□□□□ -0.04
MKS1-202ENST00000393119 PRKAA1Q13131 559 aa14.77□□□□□ -0.04
MKS1-202ENST00000393119 IER5LQ5T953 404 aa14.77□□□□□ -0.04
MKS1-202ENST00000393119 SEL1L3Q68CR1 1132 aa14.77□□□□□ -0.04
MKS1-202ENST00000393119 CYHR1Q6ZMK1 362 aa14.77□□□□□ -0.04
MKS1-202ENST00000393119 TRIM74Q86UV6 250 aa14.77□□□□□ -0.04
MKS1-202ENST00000393119 VRK3Q8IV63 474 aa14.77□□□□□ -0.04
MKS1-202ENST00000393119 RBFAQ8N0V3 343 aa14.77□□□□□ -0.04
MKS1-202ENST00000393119 PIP4K2CQ8TBX8 421 aa14.77□□□□□ -0.04
MKS1-202ENST00000393119 FOXJ1Q92949 421 aa14.77□□□□□ -0.04
MKS1-202ENST00000393119 NSL1Q96IY1 281 aa14.77□□□□□ -0.04
MKS1-202ENST00000393119 RAB3IPQ96QF0 476 aaPredicted RBP14.77□□□□□ -0.04
MKS1-202ENST00000393119 ZNF576Q9H609 170 aa14.77□□□□□ -0.04
MKS1-202ENST00000393119 POPDC3Q9HBV1 291 aa14.77□□□□□ -0.04
MKS1-202ENST00000393119 ZBTB26Q9HCK0 441 aa14.77□□□□□ -0.04
MKS1-202ENST00000393119 MYO15AQ9UKN7 3530 aa14.77□□□□□ -0.04
MKS1-202ENST00000393119 TMEM202A6NGA9 273 aa14.77□□□□□ -0.05
MKS1-202ENST00000393119 HDAC3O15379 428 aa14.77□□□□□ -0.05
MKS1-202ENST00000393119 KERAO60938 352 aa14.77□□□□□ -0.05
MKS1-202ENST00000393119 SMIM24O75264 130 aa14.77□□□□□ -0.05
MKS1-202ENST00000393119 SERPINA6P08185 405 aa14.77□□□□□ -0.05
MKS1-202ENST00000393119 SRPRAP08240 638 aaKnown RBP14.77□□□□□ -0.05
MKS1-202ENST00000393119 VIPR1P32241 457 aa14.77□□□□□ -0.05
MKS1-202ENST00000393119 CCR7P32248 378 aa14.77□□□□□ -0.05
MKS1-202ENST00000393119 SLC26A3P40879 764 aa14.77□□□□□ -0.05
MKS1-202ENST00000393119 ERFP50548 548 aa14.77□□□□□ -0.05
MKS1-202ENST00000393119 HERVK_113P63132 956 aa14.77□□□□□ -0.05
MKS1-202ENST00000393119 MRPS35P82673 323 aaKnown RBP14.77□□□□□ -0.05
MKS1-202ENST00000393119 BTKQ06187 659 aa14.77□□□□□ -0.05
MKS1-202ENST00000393119 GPRC6AQ5T6X5 926 aa14.77□□□□□ -0.05
MKS1-202ENST00000393119 BRAT1Q6PJG6 821 aa14.77□□□□□ -0.05
MKS1-202ENST00000393119 TMEM184AQ6ZMB5 413 aa14.77□□□□□ -0.05
MKS1-202ENST00000393119 TDHQ8IZJ6 230 aa14.77□□□□□ -0.05
MKS1-202ENST00000393119 CBARPQ8N350 705 aaPredicted RBP14.77□□□□□ -0.05
MKS1-202ENST00000393119 CFAP61Q8NHU2 1237 aa14.77□□□□□ -0.05
MKS1-202ENST00000393119 STAG3L4Q8TBR4 150 aa14.77□□□□□ -0.05
MKS1-202ENST00000393119 C3orf30Q96M34 536 aa14.77□□□□□ -0.05
MKS1-202ENST00000393119 CATSPER2Q96P56 530 aa14.77□□□□□ -0.05
MKS1-202ENST00000393119 CDK15Q96Q40 435 aa14.77□□□□□ -0.05
MKS1-202ENST00000393119 ERVK-6Q9BXR3 956 aa14.77□□□□□ -0.05
MKS1-202ENST00000393119 TRPV4Q9HBA0 871 aa14.77□□□□□ -0.05
MKS1-202ENST00000393119 THG1LQ9NWX6 298 aaKnown RBP14.77□□□□□ -0.05
MKS1-202ENST00000393119 COL4A3Q01955 1670 aa14.77□□□□□ -0.05
MKS1-202ENST00000393119 NUP210Q8TEM1 1887 aaPredicted RBP14.77□□□□□ -0.05
MKS1-202ENST00000393119 OR2AG2A6NM03 316 aa14.76□□□□□ -0.05
MKS1-202ENST00000393119 NPHS1O60500 1241 aa14.76□□□□□ -0.05
MKS1-202ENST00000393119 H2AFYO75367 372 aaKnown RBP14.76□□□□□ -0.05
MKS1-202ENST00000393119 CDK14O94921 469 aa14.76□□□□□ -0.05
MKS1-202ENST00000393119 EPHX1P07099 455 aa14.76□□□□□ -0.05
MKS1-202ENST00000393119 ACADSP16219 412 aa14.76□□□□□ -0.05
MKS1-202ENST00000393119 PSMC3P17980 439 aa14.76□□□□□ -0.05
MKS1-202ENST00000393119 XPAP23025 273 aaPredicted RBP14.76□□□□□ -0.05
MKS1-202ENST00000393119 SERPINB5P36952 375 aa14.76□□□□□ -0.05
MKS1-202ENST00000393119 POLR2LP62875 67 aaKnown RBP14.76□□□□□ -0.05
MKS1-202ENST00000393119 PHKG1Q16816 387 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms