RNA–Protein interactions for RNA: ENST00000391942.6

ERCC2-202, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC2, Length 1,488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-202ENST00000391942 TRIM16O95361 564 aa16.8■□□□□ 0.28
ERCC2-202ENST00000391942 ESR1P03372 595 aa16.8■□□□□ 0.28
ERCC2-202ENST00000391942 OR56A5P0C7T3 313 aa16.8■□□□□ 0.28
ERCC2-202ENST00000391942 KELP23276 732 aa16.8■□□□□ 0.28
ERCC2-202ENST00000391942 SERPINB9P50453 376 aa16.8■□□□□ 0.28
ERCC2-202ENST00000391942 AFF3P51826 1226 aaKnown RBP16.8■□□□□ 0.28
ERCC2-202ENST00000391942 CDKN2DP55273 166 aa16.8■□□□□ 0.28
ERCC2-202ENST00000391942 TCF15Q12870 199 aa16.8■□□□□ 0.28
ERCC2-202ENST00000391942 FZD2Q14332 565 aa16.8■□□□□ 0.28
ERCC2-202ENST00000391942 TCEA2Q15560 299 aa16.8■□□□□ 0.28
ERCC2-202ENST00000391942 ZNF542PQ5EBM4 170 aa16.8■□□□□ 0.28
ERCC2-202ENST00000391942 HECTD2Q5U5R9 776 aa16.8■□□□□ 0.28
ERCC2-202ENST00000391942 ZC3H14Q6PJT7 736 aaKnown RBP16.8■□□□□ 0.28
ERCC2-202ENST00000391942 NAPRTQ6XQN6 538 aa16.8■□□□□ 0.28
ERCC2-202ENST00000391942 MACC1Q6ZN28 852 aa16.8■□□□□ 0.28
ERCC2-202ENST00000391942 TAOK1Q7L7X3 1001 aa16.8■□□□□ 0.28
ERCC2-202ENST00000391942 CYP4X1Q8N118 509 aa16.8■□□□□ 0.28
ERCC2-202ENST00000391942 DCLK2Q8N568 766 aa16.8■□□□□ 0.28
ERCC2-202ENST00000391942 FAM174AQ8TBP5 190 aa16.8■□□□□ 0.28
ERCC2-202ENST00000391942 ROPN1BQ9BZX4 212 aaPredicted RBP16.8■□□□□ 0.28
ERCC2-202ENST00000391942 CENPHQ9H3R5 247 aa16.8■□□□□ 0.28
ERCC2-202ENST00000391942 ROPN1Q9HAT0 212 aaPredicted RBP16.8■□□□□ 0.28
ERCC2-202ENST00000391942 GALPQ9UBC7 116 aa16.8■□□□□ 0.28
ERCC2-202ENST00000391942 SUFUQ9UMX1 484 aa16.8■□□□□ 0.28
ERCC2-202ENST00000391942 PCDHB1Q9Y5F3 818 aa16.8■□□□□ 0.28
ERCC2-202ENST00000391942 FANCMQ8IYD8 2048 aa16.79■□□□□ 0.28
ERCC2-202ENST00000391942 SPTY2D1-AS1A0A0U1RR47 76 aa16.79■□□□□ 0.28
ERCC2-202ENST00000391942 A0A1B0GTW7 788 aa16.79■□□□□ 0.28
ERCC2-202ENST00000391942 A0A1B0GVT2 93 aa16.79■□□□□ 0.28
ERCC2-202ENST00000391942 PRSS38A1L453 326 aa16.79■□□□□ 0.28
ERCC2-202ENST00000391942 TRIM49D1C9J1S8 452 aa16.79■□□□□ 0.28
ERCC2-202ENST00000391942 E5RI56 91 aa16.79■□□□□ 0.28
ERCC2-202ENST00000391942 CDH16O75309 829 aa16.79■□□□□ 0.28
ERCC2-202ENST00000391942 KRT38O76015 456 aa16.79■□□□□ 0.28
ERCC2-202ENST00000391942 AP2A2O94973 939 aa16.79■□□□□ 0.28
ERCC2-202ENST00000391942 GNSP15586 552 aa16.79■□□□□ 0.28
ERCC2-202ENST00000391942 CHRM3P20309 590 aa16.79■□□□□ 0.28
ERCC2-202ENST00000391942 GNPDA1P46926 289 aa16.79■□□□□ 0.28
ERCC2-202ENST00000391942 ADARP55265 1226 aaKnown RBP16.79■□□□□ 0.28
ERCC2-202ENST00000391942 C21orf59P57076 290 aa16.79■□□□□ 0.28
ERCC2-202ENST00000391942 PTK2BQ14289 1009 aa16.79■□□□□ 0.28
ERCC2-202ENST00000391942 ALG11Q2TAA5 492 aa16.79■□□□□ 0.28
ERCC2-202ENST00000391942 PIM3Q86V86 326 aa16.79■□□□□ 0.28
ERCC2-202ENST00000391942 IQCHQ86VS3 1027 aa16.79■□□□□ 0.28
ERCC2-202ENST00000391942 SPATS2Q86XZ4 545 aaKnown RBP16.79■□□□□ 0.28
ERCC2-202ENST00000391942 TDRPQ86YL5 185 aa16.79■□□□□ 0.28
ERCC2-202ENST00000391942 SYT12Q8IV01 421 aa16.79■□□□□ 0.28
ERCC2-202ENST00000391942 HID1Q8IV36 788 aa16.79■□□□□ 0.28
ERCC2-202ENST00000391942 ZNF547Q8IVP9 402 aa16.79■□□□□ 0.28
ERCC2-202ENST00000391942 GPR22Q99680 433 aa16.79■□□□□ 0.28
ERCC2-202ENST00000391942 OLFM1Q99784 485 aa16.79■□□□□ 0.28
ERCC2-202ENST00000391942 TMEM109Q9BVC6 243 aa16.79■□□□□ 0.28
ERCC2-202ENST00000391942 CARS2Q9HA77 564 aaKnown RBP16.79■□□□□ 0.28
ERCC2-202ENST00000391942 PPCSQ9HAB8 311 aa16.79■□□□□ 0.28
ERCC2-202ENST00000391942 GPR27Q9NS67 375 aa16.79■□□□□ 0.28
ERCC2-202ENST00000391942 TM7SF3Q9NS93 570 aa16.79■□□□□ 0.28
ERCC2-202ENST00000391942 GPSM3Q9Y4H4 160 aa16.79■□□□□ 0.28
ERCC2-202ENST00000391942 PIKFYVEQ9Y2I7 2098 aa16.78■□□□□ 0.28
ERCC2-202ENST00000391942 IQANK1A0A1B0GTG1 560 aa16.78■□□□□ 0.28
ERCC2-202ENST00000391942 CHUKO15111 745 aa16.78■□□□□ 0.28
ERCC2-202ENST00000391942 VILLO15195 856 aa16.78■□□□□ 0.28
ERCC2-202ENST00000391942 GRID2O43424 1007 aa16.78■□□□□ 0.28
ERCC2-202ENST00000391942 KRT37O76014 449 aa16.78■□□□□ 0.28
ERCC2-202ENST00000391942 PRLHRP49683 370 aa16.78■□□□□ 0.28
ERCC2-202ENST00000391942 SRP54P61011 504 aaKnown RBP16.78■□□□□ 0.28
ERCC2-202ENST00000391942 EIF2B5Q13144 721 aaKnown RBP16.78■□□□□ 0.28
ERCC2-202ENST00000391942 ZNF460Q14592 562 aa16.78■□□□□ 0.28
ERCC2-202ENST00000391942 USP10Q14694 798 aaKnown RBP16.78■□□□□ 0.28
ERCC2-202ENST00000391942 TEAD4Q15561 434 aa16.78■□□□□ 0.28
ERCC2-202ENST00000391942 FAM45BPQ6NSW5 357 aa16.78■□□□□ 0.28
ERCC2-202ENST00000391942 CMC1Q7Z7K0 106 aa16.78■□□□□ 0.28
ERCC2-202ENST00000391942 LRRTM4Q86VH4 590 aa16.78■□□□□ 0.28
ERCC2-202ENST00000391942 GALNT13Q8IUC8 556 aa16.78■□□□□ 0.28
ERCC2-202ENST00000391942 FAM45AQ8TCE6 357 aa16.78■□□□□ 0.28
ERCC2-202ENST00000391942 EURLQ9NYK6 297 aa16.78■□□□□ 0.28
ERCC2-202ENST00000391942 RAB23Q9ULC3 237 aa16.78■□□□□ 0.28
ERCC2-202ENST00000391942 CORO1CQ9ULV4 474 aaPredicted RBP16.78■□□□□ 0.28
ERCC2-202ENST00000391942 MED16Q9Y2X0 877 aa16.78■□□□□ 0.28
ERCC2-202ENST00000391942 VWA7Q9Y334 891 aa16.78■□□□□ 0.28
ERCC2-202ENST00000391942 PRR5-ARHGAP8B1AHC4 643 aa16.77■□□□□ 0.28
ERCC2-202ENST00000391942 H3BMM5 538 aa16.77■□□□□ 0.28
ERCC2-202ENST00000391942 MAP2K7O14733 419 aa16.77■□□□□ 0.28
ERCC2-202ENST00000391942 VPS26AO75436 327 aa16.77■□□□□ 0.28
ERCC2-202ENST00000391942 CFIP05156 583 aa16.77■□□□□ 0.28
ERCC2-202ENST00000391942 SNRPAP09012 282 aaKnown RBP16.77■□□□□ 0.28
ERCC2-202ENST00000391942 SLC12A2P55011 1212 aa16.77■□□□□ 0.28
ERCC2-202ENST00000391942 NXPH1P58417 271 aa16.77■□□□□ 0.28
ERCC2-202ENST00000391942 TAS2R39P59534 338 aa16.77■□□□□ 0.28
ERCC2-202ENST00000391942 TIAL1Q01085 375 aaKnown RBP eCLIP16.77■□□□□ 0.28
ERCC2-202ENST00000391942 OVGP1Q12889 678 aa16.77■□□□□ 0.28
ERCC2-202ENST00000391942 CCDC6Q16204 474 aa16.77■□□□□ 0.28
ERCC2-202ENST00000391942 BCL7AQ4VC05 210 aa16.77■□□□□ 0.28
ERCC2-202ENST00000391942 PRAMEF14Q5SWL7 426 aa16.77■□□□□ 0.28
ERCC2-202ENST00000391942 LGSNQ5TDP6 509 aa16.77■□□□□ 0.28
ERCC2-202ENST00000391942 CHST15Q7LFX5 561 aaPredicted RBP16.77■□□□□ 0.28
ERCC2-202ENST00000391942 DCP2Q8IU60 420 aaKnown RBP16.77■□□□□ 0.28
ERCC2-202ENST00000391942 CEP97Q8IW35 865 aa16.77■□□□□ 0.28
ERCC2-202ENST00000391942 SIDT2Q8NBJ9 832 aaKnown RBP16.77■□□□□ 0.28
ERCC2-202ENST00000391942 GPR21Q99679 349 aa16.77■□□□□ 0.28
ERCC2-202ENST00000391942 SLC30A3Q99726 388 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms