RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 CRNNQ9UBG3 495 aaPredicted RBP13.02□□□□□ -0.33
TRAPPC9-201ENST00000389328 PCDHB5Q9Y5E4 795 aa13.02□□□□□ -0.33
TRAPPC9-201ENST00000389328 CXCL11O14625 94 aa13.02□□□□□ -0.33
TRAPPC9-201ENST00000389328 ENPP3O14638 875 aa13.02□□□□□ -0.33
TRAPPC9-201ENST00000389328 MYL12BO14950 172 aa13.02□□□□□ -0.33
TRAPPC9-201ENST00000389328 DGKAP23743 735 aa13.02□□□□□ -0.33
TRAPPC9-201ENST00000389328 PSEN2P49810 448 aa13.02□□□□□ -0.33
TRAPPC9-201ENST00000389328 SLC16A1P53985 500 aa13.02□□□□□ -0.33
TRAPPC9-201ENST00000389328 C1QTNF8P60827 252 aa13.02□□□□□ -0.33
TRAPPC9-201ENST00000389328 RBM48Q5RL73 367 aaKnown RBP13.02□□□□□ -0.33
TRAPPC9-201ENST00000389328 PLEKHH3Q7Z736 793 aa13.02□□□□□ -0.33
TRAPPC9-201ENST00000389328 ZDHHC21Q8IVQ6 265 aa13.02□□□□□ -0.33
TRAPPC9-201ENST00000389328 TTC29Q8NA56 475 aaPredicted RBP13.02□□□□□ -0.33
TRAPPC9-201ENST00000389328 ACVR1CQ8NER5 493 aa13.02□□□□□ -0.33
TRAPPC9-201ENST00000389328 STON2Q8WXE9 905 aa13.02□□□□□ -0.33
TRAPPC9-201ENST00000389328 CDCA5Q96FF9 252 aa13.02□□□□□ -0.33
TRAPPC9-201ENST00000389328 NPY6RQ99463 290 aa13.02□□□□□ -0.33
TRAPPC9-201ENST00000389328 RNF39Q9H2S5 420 aa13.02□□□□□ -0.33
TRAPPC9-201ENST00000389328 RPF2Q9H7B2 306 aaKnown RBP13.02□□□□□ -0.33
TRAPPC9-201ENST00000389328 TAF1P21675 1872 aa13.01□□□□□ -0.33
TRAPPC9-201ENST00000389328 A0A1W2PQH9 124 aa13.01□□□□□ -0.33
TRAPPC9-201ENST00000389328 CCDC182A6NF36 153 aa13.01□□□□□ -0.33
TRAPPC9-201ENST00000389328 LRRC14BA6NHZ5 514 aa13.01□□□□□ -0.33
TRAPPC9-201ENST00000389328 XPNPEP2O43895 674 aa13.01□□□□□ -0.33
TRAPPC9-201ENST00000389328 XYLBO75191 536 aa13.01□□□□□ -0.33
TRAPPC9-201ENST00000389328 ANXA5P08758 320 aa13.01□□□□□ -0.33
TRAPPC9-201ENST00000389328 INHBCP55103 352 aa13.01□□□□□ -0.33
TRAPPC9-201ENST00000389328 NFATC3Q12968 1075 aa13.01□□□□□ -0.33
TRAPPC9-201ENST00000389328 SKIV2LQ15477 1246 aaKnown RBP13.01□□□□□ -0.33
TRAPPC9-201ENST00000389328 OR52J3Q8NH60 311 aa13.01□□□□□ -0.33
TRAPPC9-201ENST00000389328 NTAN1Q96AB6 310 aa13.01□□□□□ -0.33
TRAPPC9-201ENST00000389328 ZUFSPQ96AP4 578 aa13.01□□□□□ -0.33
TRAPPC9-201ENST00000389328 ITM2CQ9NQX7 267 aa13.01□□□□□ -0.33
TRAPPC9-201ENST00000389328 ZCWPW2A0A1B0GU75 182 aa13.01□□□□□ -0.33
TRAPPC9-201ENST00000389328 IRF8Q02556 426 aa13.01□□□□□ -0.33
TRAPPC9-201ENST00000389328 STK40Q8N2I9 435 aa13.01□□□□□ -0.33
TRAPPC9-201ENST00000389328 TRPM4Q8TD43 1214 aa13.01□□□□□ -0.33
TRAPPC9-201ENST00000389328 SLC13A3Q8WWT9 602 aa13.01□□□□□ -0.33
TRAPPC9-201ENST00000389328 RSPH1Q8WYR4 309 aa13.01□□□□□ -0.33
TRAPPC9-201ENST00000389328 OTUB1Q96FW1 271 aaPredicted RBP13.01□□□□□ -0.33
TRAPPC9-201ENST00000389328 ITCHQ96J02 903 aa13.01□□□□□ -0.33
TRAPPC9-201ENST00000389328 SLC45A3Q96JT2 553 aa13.01□□□□□ -0.33
TRAPPC9-201ENST00000389328 APOLD1Q96LR9 279 aa13.01□□□□□ -0.33
TRAPPC9-201ENST00000389328 NSUN5Q96P11 429 aaKnown RBP13.01□□□□□ -0.33
TRAPPC9-201ENST00000389328 CGREF1Q99674 301 aa13.01□□□□□ -0.33
TRAPPC9-201ENST00000389328 LRTM1Q9HBL6 345 aa13.01□□□□□ -0.33
TRAPPC9-201ENST00000389328 MOSPD1Q9UJG1 213 aa13.01□□□□□ -0.33
TRAPPC9-201ENST00000389328 CNOT11Q9UKZ1 510 aaKnown RBP13.01□□□□□ -0.33
TRAPPC9-201ENST00000389328 PIPSLA2A3N6 862 aa13.01□□□□□ -0.33
TRAPPC9-201ENST00000389328 FAM234BA2RU67 622 aa13.01□□□□□ -0.33
TRAPPC9-201ENST00000389328 PRR23D1E9PI22 279 aaPredicted RBP13.01□□□□□ -0.33
TRAPPC9-201ENST00000389328 H3BMQ9 156 aa13.01□□□□□ -0.33
TRAPPC9-201ENST00000389328 SLC28A1O00337 649 aa13.01□□□□□ -0.33
TRAPPC9-201ENST00000389328 IFNA14P01570 189 aa13.01□□□□□ -0.33
TRAPPC9-201ENST00000389328 EIF2S1P05198 315 aaKnown RBP13.01□□□□□ -0.33
TRAPPC9-201ENST00000389328 PRR23D2P0DMB1 279 aaPredicted RBP13.01□□□□□ -0.33
TRAPPC9-201ENST00000389328 MYCLP1P12525 358 aaPredicted RBP13.01□□□□□ -0.33
TRAPPC9-201ENST00000389328 PBLDP30039 288 aaPredicted RBP13.01□□□□□ -0.33
TRAPPC9-201ENST00000389328 ALDH3A2P51648 485 aa13.01□□□□□ -0.33
TRAPPC9-201ENST00000389328 CDC42P60953 191 aa13.01□□□□□ -0.33
TRAPPC9-201ENST00000389328 ERVK-8P63133 956 aa13.01□□□□□ -0.33
TRAPPC9-201ENST00000389328 PTPRCAPQ14761 206 aa13.01□□□□□ -0.33
TRAPPC9-201ENST00000389328 UBE2J2Q8N2K1 259 aa13.01□□□□□ -0.33
TRAPPC9-201ENST00000389328 SIDT2Q8NBJ9 832 aaKnown RBP13.01□□□□□ -0.33
TRAPPC9-201ENST00000389328 COG8Q96MW5 612 aa13.01□□□□□ -0.33
TRAPPC9-201ENST00000389328 ANKRD60Q9BZ19 345 aa13.01□□□□□ -0.33
TRAPPC9-201ENST00000389328 MIR1-1HGQ9H1L0 117 aa13.01□□□□□ -0.33
TRAPPC9-201ENST00000389328 FAM124BQ9H5Z6 455 aaPredicted RBP13.01□□□□□ -0.33
TRAPPC9-201ENST00000389328 WDR70Q9NW82 654 aa13.01□□□□□ -0.33
TRAPPC9-201ENST00000389328 SAMD4AQ9UPU9 718 aaKnown RBP13.01□□□□□ -0.33
TRAPPC9-201ENST00000389328 PMF1-BGLAPU3KQ54 211 aa13.01□□□□□ -0.33
TRAPPC9-201ENST00000389328 FAM220BPB1ANY3 271 aa13□□□□□ -0.33
TRAPPC9-201ENST00000389328 EFNA1P20827 205 aaPredicted RBP13□□□□□ -0.33
TRAPPC9-201ENST00000389328 ACADVLP49748 655 aa13□□□□□ -0.33
TRAPPC9-201ENST00000389328 CLCNKBP51801 687 aa13□□□□□ -0.33
TRAPPC9-201ENST00000389328 RAB14P61106 215 aa13□□□□□ -0.33
TRAPPC9-201ENST00000389328 GPR153Q6NV75 609 aa13□□□□□ -0.33
TRAPPC9-201ENST00000389328 ANKFN1Q8N957 763 aa13□□□□□ -0.33
TRAPPC9-201ENST00000389328 ST13P5Q8NFI4 369 aaPredicted RBP13□□□□□ -0.33
TRAPPC9-201ENST00000389328 MAGEE1Q9HCI5 957 aa13□□□□□ -0.33
TRAPPC9-201ENST00000389328 PCDHB9Q9Y5E1 797 aa13□□□□□ -0.33
TRAPPC9-201ENST00000389328 PRSS51A0A1B0GVH4 220 aa13□□□□□ -0.33
TRAPPC9-201ENST00000389328 SLC22A1O15245 554 aa13□□□□□ -0.33
TRAPPC9-201ENST00000389328 B4GAT1O43505 415 aa13□□□□□ -0.33
TRAPPC9-201ENST00000389328 NNMTP40261 264 aa13□□□□□ -0.33
TRAPPC9-201ENST00000389328 BMXP51813 675 aa13□□□□□ -0.33
TRAPPC9-201ENST00000389328 SLC10A7Q0GE19 358 aa13□□□□□ -0.33
TRAPPC9-201ENST00000389328 GALNT2Q10471 571 aa13□□□□□ -0.33
TRAPPC9-201ENST00000389328 TMEM236Q5W0B7 351 aa13□□□□□ -0.33
TRAPPC9-201ENST00000389328 TRNP1Q6NT89 227 aa13□□□□□ -0.33
TRAPPC9-201ENST00000389328 FAM151BQ6UXP7 276 aa13□□□□□ -0.33
TRAPPC9-201ENST00000389328 SVOPLQ8N434 492 aa13□□□□□ -0.33
TRAPPC9-201ENST00000389328 SAGE2PA6NJ88 616 aa13□□□□□ -0.33
TRAPPC9-201ENST00000389328 H0YJX3 145 aa13□□□□□ -0.33
TRAPPC9-201ENST00000389328 AURKAO14965 403 aa13□□□□□ -0.33
TRAPPC9-201ENST00000389328 DDNO94850 711 aaPredicted RBP13□□□□□ -0.33
TRAPPC9-201ENST00000389328 PROZP22891 400 aa13□□□□□ -0.33
TRAPPC9-201ENST00000389328 HMGCS1Q01581 520 aa13□□□□□ -0.33
TRAPPC9-201ENST00000389328 SPIBQ01892 262 aa13□□□□□ -0.33
TRAPPC9-201ENST00000389328 ANKDD1AQ495B1 522 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms