RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 CASQ2O14958 399 aaPredicted RBP10.71□□□□□ -0.69
NEDD9-201ENST00000379433 HDAC3O15379 428 aa10.71□□□□□ -0.69
NEDD9-201ENST00000379433 SLC7A4O43246 635 aa10.71□□□□□ -0.69
NEDD9-201ENST00000379433 IPO13O94829 963 aaKnown RBP10.71□□□□□ -0.69
NEDD9-201ENST00000379433 CD160O95971 181 aa10.71□□□□□ -0.69
NEDD9-201ENST00000379433 GLUD1P00367 558 aa10.71□□□□□ -0.69
NEDD9-201ENST00000379433 LEPRP48357 1165 aaKnown RBP10.71□□□□□ -0.69
NEDD9-201ENST00000379433 Q6ZVU0 165 aa10.71□□□□□ -0.69
NEDD9-201ENST00000379433 ITIH5Q86UX2 942 aa10.71□□□□□ -0.69
NEDD9-201ENST00000379433 SCUBE1Q8IWY4 988 aa10.71□□□□□ -0.69
NEDD9-201ENST00000379433 LSMEM2Q8N112 164 aa10.71□□□□□ -0.69
NEDD9-201ENST00000379433 PCDH20Q8N6Y1 951 aaKnown RBP10.71□□□□□ -0.69
NEDD9-201ENST00000379433 EEF1AKMT1Q8WVE0 214 aa10.71□□□□□ -0.69
NEDD9-201ENST00000379433 TOX2Q96NM4 488 aa10.71□□□□□ -0.69
NEDD9-201ENST00000379433 CCDC106Q9BWC9 280 aa10.71□□□□□ -0.69
NEDD9-201ENST00000379433 MFSD1Q9H3U5 465 aa10.71□□□□□ -0.69
NEDD9-201ENST00000379433 PIDD1Q9HB75 910 aa10.71□□□□□ -0.69
NEDD9-201ENST00000379433 IL21Q9HBE4 155 aa10.71□□□□□ -0.69
NEDD9-201ENST00000379433 MROH6A6NGR9 719 aa10.71□□□□□ -0.69
NEDD9-201ENST00000379433 CIB2O75838 187 aa10.71□□□□□ -0.69
NEDD9-201ENST00000379433 NPPAP01160 153 aa10.71□□□□□ -0.69
NEDD9-201ENST00000379433 ATP5F1P24539 256 aaPredicted RBP10.71□□□□□ -0.69
NEDD9-201ENST00000379433 CLCN5P51795 746 aa10.71□□□□□ -0.69
NEDD9-201ENST00000379433 C1QTNF8P60827 252 aa10.71□□□□□ -0.69
NEDD9-201ENST00000379433 BCL2L1Q07817 233 aa10.71□□□□□ -0.69
NEDD9-201ENST00000379433 LRRC74AQ0VAA2 488 aa10.71□□□□□ -0.69
NEDD9-201ENST00000379433 KIF19Q2TAC6 998 aa10.71□□□□□ -0.69
NEDD9-201ENST00000379433 MMEL1Q495T6 779 aa10.71□□□□□ -0.69
NEDD9-201ENST00000379433 FAM109BQ6ICB4 259 aaPredicted RBP10.71□□□□□ -0.69
NEDD9-201ENST00000379433 GK5Q6ZS86 529 aa10.71□□□□□ -0.69
NEDD9-201ENST00000379433 DDX53Q86TM3 631 aaKnown RBP10.71□□□□□ -0.69
NEDD9-201ENST00000379433 CUZD1Q86UP6 607 aa10.71□□□□□ -0.69
NEDD9-201ENST00000379433 ULK2Q8IYT8 1036 aa10.71□□□□□ -0.69
NEDD9-201ENST00000379433 HJURPQ8NCD3 748 aaPredicted RBP10.71□□□□□ -0.69
NEDD9-201ENST00000379433 RIN3Q8TB24 985 aa10.71□□□□□ -0.69
NEDD9-201ENST00000379433 FAM126AQ9BYI3 521 aaPredicted RBP10.71□□□□□ -0.69
NEDD9-201ENST00000379433 ASB8Q9H765 288 aa10.71□□□□□ -0.69
NEDD9-201ENST00000379433 IKZF3Q9UKT9 509 aa10.71□□□□□ -0.69
NEDD9-201ENST00000379433 RAP2CQ9Y3L5 183 aa10.71□□□□□ -0.69
NEDD9-201ENST00000379433 PCDHGB3Q9Y5G1 929 aa10.71□□□□□ -0.69
NEDD9-201ENST00000379433 ADH1AP07327 375 aa10.71□□□□□ -0.7
NEDD9-201ENST00000379433 LINC00032P0C843 101 aa10.71□□□□□ -0.7
NEDD9-201ENST00000379433 CA5AP35218 305 aa10.71□□□□□ -0.7
NEDD9-201ENST00000379433 FOXA1P55317 472 aa10.71□□□□□ -0.7
NEDD9-201ENST00000379433 PLA2G4EQ3MJ16 856 aa10.71□□□□□ -0.7
NEDD9-201ENST00000379433 PABPC1LQ4VXU2 614 aaKnown RBP10.71□□□□□ -0.7
NEDD9-201ENST00000379433 SGO1Q5FBB7 561 aa10.71□□□□□ -0.7
NEDD9-201ENST00000379433 PTRHD1Q6GMV3 140 aaKnown RBP10.71□□□□□ -0.7
NEDD9-201ENST00000379433 ISCA2Q86U28 154 aa10.71□□□□□ -0.7
NEDD9-201ENST00000379433 INPP5DQ92835 1189 aa10.71□□□□□ -0.7
NEDD9-201ENST00000379433 RCN3Q96D15 328 aa10.71□□□□□ -0.7
NEDD9-201ENST00000379433 TSPAN17Q96FV3 270 aa10.71□□□□□ -0.7
NEDD9-201ENST00000379433 CNDP1Q96KN2 507 aa10.71□□□□□ -0.7
NEDD9-201ENST00000379433 IGFLR1Q9H665 355 aa10.71□□□□□ -0.7
NEDD9-201ENST00000379433 LATS2Q9NRM7 1088 aa10.71□□□□□ -0.7
NEDD9-201ENST00000379433 CD274Q9NZQ7 290 aa10.71□□□□□ -0.7
NEDD9-201ENST00000379433 LNPEPQ9UIQ6 1025 aa10.71□□□□□ -0.7
NEDD9-201ENST00000379433 MICAL3Q7RTP6 2002 aa10.71□□□□□ -0.7
NEDD9-201ENST00000379433 TRAV19A0A0A6YYK7 116 aa10.7□□□□□ -0.7
NEDD9-201ENST00000379433 PCP4L1A6NKN8 68 aa10.7□□□□□ -0.7
NEDD9-201ENST00000379433 E2F3O00716 465 aa10.7□□□□□ -0.7
NEDD9-201ENST00000379433 PEX11AO75192 247 aa10.7□□□□□ -0.7
NEDD9-201ENST00000379433 PRAMEF1O95521 474 aa10.7□□□□□ -0.7
NEDD9-201ENST00000379433 PRKACAP17612 351 aa10.7□□□□□ -0.7
NEDD9-201ENST00000379433 STC1P52823 247 aa10.7□□□□□ -0.7
NEDD9-201ENST00000379433 ANKDD1AQ495B1 522 aa10.7□□□□□ -0.7
NEDD9-201ENST00000379433 FAM209AQ5JX71 171 aa10.7□□□□□ -0.7
NEDD9-201ENST00000379433 ZFAND2BQ8WV99 257 aa10.7□□□□□ -0.7
NEDD9-201ENST00000379433 OSCP1Q8WVF1 389 aa10.7□□□□□ -0.7
NEDD9-201ENST00000379433 HERVK_113Q902F9 699 aa10.7□□□□□ -0.7
NEDD9-201ENST00000379433 ZNF689Q96CS4 500 aaPredicted RBP10.7□□□□□ -0.7
NEDD9-201ENST00000379433 EID2BQ96D98 161 aa10.7□□□□□ -0.7
NEDD9-201ENST00000379433 ATP13A3Q9H7F0 1226 aa10.7□□□□□ -0.7
NEDD9-201ENST00000379433 TAS2R13Q9NYV9 303 aa10.7□□□□□ -0.7
NEDD9-201ENST00000379433 SLC7A8Q9UHI5 535 aa10.7□□□□□ -0.7
NEDD9-201ENST00000379433 ANKRD6Q9Y2G4 727 aa10.7□□□□□ -0.7
NEDD9-201ENST00000379433 NUP214P35658 2090 aaPredicted RBP10.7□□□□□ -0.7
NEDD9-201ENST00000379433 FAM221BA6H8Z2 402 aa10.7□□□□□ -0.7
NEDD9-201ENST00000379433 CAPN14A8MX76 684 aa10.7□□□□□ -0.7
NEDD9-201ENST00000379433 GRID2O43424 1007 aa10.7□□□□□ -0.7
NEDD9-201ENST00000379433 PRDX3P30048 256 aaKnown RBP10.7□□□□□ -0.7
NEDD9-201ENST00000379433 HLA-FP30511 346 aa10.7□□□□□ -0.7
NEDD9-201ENST00000379433 PTGS2P35354 604 aa10.7□□□□□ -0.7
NEDD9-201ENST00000379433 MAGEA12P43365 314 aa10.7□□□□□ -0.7
NEDD9-201ENST00000379433 KLF10Q13118 480 aa10.7□□□□□ -0.7
NEDD9-201ENST00000379433 PRKAA1Q13131 559 aa10.7□□□□□ -0.7
NEDD9-201ENST00000379433 TUBB3Q13509 450 aa10.7□□□□□ -0.7
NEDD9-201ENST00000379433 TSTA3Q13630 321 aaPredicted RBP10.7□□□□□ -0.7
NEDD9-201ENST00000379433 RBBP7Q16576 425 aa10.7□□□□□ -0.7
NEDD9-201ENST00000379433 TECRLQ5HYJ1 363 aa10.7□□□□□ -0.7
NEDD9-201ENST00000379433 PITRM1Q5JRX3 1037 aa10.7□□□□□ -0.7
NEDD9-201ENST00000379433 TJAP1Q5JTD0 557 aa10.7□□□□□ -0.7
NEDD9-201ENST00000379433 DGKKQ5KSL6 1271 aa10.7□□□□□ -0.7
NEDD9-201ENST00000379433 RETSATQ6NUM9 610 aa10.7□□□□□ -0.7
NEDD9-201ENST00000379433 PIWIL4Q7Z3Z4 852 aaKnown RBP10.7□□□□□ -0.7
NEDD9-201ENST00000379433 TMPRSS6Q8IU80 811 aa10.7□□□□□ -0.7
NEDD9-201ENST00000379433 CNTN4Q8IWV2 1026 aa10.7□□□□□ -0.7
NEDD9-201ENST00000379433 TCEAL8Q8IYN2 117 aa10.7□□□□□ -0.7
NEDD9-201ENST00000379433 PTCD2Q8WV60 388 aaKnown RBP10.7□□□□□ -0.7
NEDD9-201ENST00000379433 LINGO1Q96FE5 620 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms