RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 NDST3O95803 873 aa18.86■□□□□ 0.61
CBWD3-204ENST00000377349 SLC2A4P14672 509 aa18.86■□□□□ 0.61
CBWD3-204ENST00000377349 ZNF28P17035 718 aa18.86■□□□□ 0.61
CBWD3-204ENST00000377349 F8A1P23610 371 aa18.86■□□□□ 0.61
CBWD3-204ENST00000377349 CTNNA2P26232 953 aa18.86■□□□□ 0.61
CBWD3-204ENST00000377349 ATP5OP48047 213 aa18.86■□□□□ 0.61
CBWD3-204ENST00000377349 DCDC1P59894 354 aa18.86■□□□□ 0.61
CBWD3-204ENST00000377349 C11orf63Q6NUN7 778 aa18.86■□□□□ 0.61
CBWD3-204ENST00000377349 PID1Q7Z2X4 250 aa18.86■□□□□ 0.61
CBWD3-204ENST00000377349 ADGRG6Q86SQ4 1221 aa18.86■□□□□ 0.61
CBWD3-204ENST00000377349 PHYKPLQ8IUZ5 450 aa18.86■□□□□ 0.61
CBWD3-204ENST00000377349 IPMKQ8NFU5 416 aa18.86■□□□□ 0.61
CBWD3-204ENST00000377349 GDAP1Q8TB36 358 aa18.86■□□□□ 0.61
CBWD3-204ENST00000377349 STARD8Q92502 1023 aa18.86■□□□□ 0.61
CBWD3-204ENST00000377349 KIAA1143Q96AT1 154 aaPredicted RBP18.86■□□□□ 0.61
CBWD3-204ENST00000377349 ZSCAN5AQ9BUG6 496 aa18.86■□□□□ 0.61
CBWD3-204ENST00000377349 C10orf88Q9H8K7 445 aa18.86■□□□□ 0.61
CBWD3-204ENST00000377349 KLC4Q9NSK0 619 aa18.86■□□□□ 0.61
CBWD3-204ENST00000377349 ZNF624Q9P2J8 865 aaPredicted RBP18.86■□□□□ 0.61
CBWD3-204ENST00000377349 SPO11Q9Y5K1 396 aa18.86■□□□□ 0.61
CBWD3-204ENST00000377349 MRPS18BQ9Y676 258 aaKnown RBP18.86■□□□□ 0.61
CBWD3-204ENST00000377349 SLC30A1Q9Y6M5 507 aa18.86■□□□□ 0.61
CBWD3-204ENST00000377349 AURKAO14965 403 aa18.85■□□□□ 0.61
CBWD3-204ENST00000377349 POLR1CO15160 346 aaPredicted RBP18.85■□□□□ 0.61
CBWD3-204ENST00000377349 NDUFA10O95299 355 aa18.85■□□□□ 0.61
CBWD3-204ENST00000377349 LCA5LO95447 670 aa18.85■□□□□ 0.61
CBWD3-204ENST00000377349 PTMAP06454 111 aaKnown RBP18.85■□□□□ 0.61
CBWD3-204ENST00000377349 XRCC1P18887 633 aaPredicted RBP18.85■□□□□ 0.61
CBWD3-204ENST00000377349 CASRP41180 1078 aa18.85■□□□□ 0.61
CBWD3-204ENST00000377349 SLC19A1P41440 591 aa18.85■□□□□ 0.61
CBWD3-204ENST00000377349 HADHBP55084 474 aaKnown RBP18.85■□□□□ 0.61
CBWD3-204ENST00000377349 FOXK1P85037 733 aa18.85■□□□□ 0.61
CBWD3-204ENST00000377349 MAP7Q14244 749 aa18.85■□□□□ 0.61
CBWD3-204ENST00000377349 SEPT7Q16181 437 aaKnown RBP18.85■□□□□ 0.61
CBWD3-204ENST00000377349 INSCQ1MX18 579 aa18.85■□□□□ 0.61
CBWD3-204ENST00000377349 KHDC1Q4VXA5 237 aaKnown RBP18.85■□□□□ 0.61
CBWD3-204ENST00000377349 CRTC2Q53ET0 693 aaPredicted RBP18.85■□□□□ 0.61
CBWD3-204ENST00000377349 TMEM26Q6ZUK4 368 aa18.85■□□□□ 0.61
CBWD3-204ENST00000377349 ZNF547Q8IVP9 402 aa18.85■□□□□ 0.61
CBWD3-204ENST00000377349 TADA1Q96BN2 335 aa18.85■□□□□ 0.61
CBWD3-204ENST00000377349 RNF31Q96EP0 1072 aa18.85■□□□□ 0.61
CBWD3-204ENST00000377349 C9orf72Q96LT7 481 aa18.85■□□□□ 0.61
CBWD3-204ENST00000377349 EFHD1Q9BUP0 239 aa18.85■□□□□ 0.61
CBWD3-204ENST00000377349 TRIT1Q9H3H1 467 aaKnown RBP18.85■□□□□ 0.61
CBWD3-204ENST00000377349 MAGEE1Q9HCI5 957 aa18.85■□□□□ 0.61
CBWD3-204ENST00000377349 TRIM39Q9HCM9 518 aa18.85■□□□□ 0.61
CBWD3-204ENST00000377349 ZNF71Q9NQZ8 489 aaPredicted RBP18.85■□□□□ 0.61
CBWD3-204ENST00000377349 FAM153AQ9UHL3 310 aa18.85■□□□□ 0.61
CBWD3-204ENST00000377349 RSPH14Q9UHP6 348 aa18.85■□□□□ 0.61
CBWD3-204ENST00000377349 DNAJC16Q9Y2G8 782 aa18.85■□□□□ 0.61
CBWD3-204ENST00000377349 EPN1Q9Y6I3 576 aaPredicted RBP18.85■□□□□ 0.61
CBWD3-204ENST00000377349 BRAFP15056 766 aa18.84■□□□□ 0.61
CBWD3-204ENST00000377349 CD68P34810 354 aaPredicted RBP18.84■□□□□ 0.61
CBWD3-204ENST00000377349 WNT3AP56704 352 aa18.84■□□□□ 0.61
CBWD3-204ENST00000377349 WASHC5Q12768 1159 aa18.84■□□□□ 0.61
CBWD3-204ENST00000377349 DEFB109BQ30KR1 87 aa18.84■□□□□ 0.61
CBWD3-204ENST00000377349 TMC3Q7Z5M5 1100 aa18.84■□□□□ 0.61
CBWD3-204ENST00000377349 KIAA1328Q86T90 577 aa18.84■□□□□ 0.61
CBWD3-204ENST00000377349 PLXDC1Q8IUK5 500 aa18.84■□□□□ 0.61
CBWD3-204ENST00000377349 ZNF567Q8N184 647 aa18.84■□□□□ 0.61
CBWD3-204ENST00000377349 ACRBPQ8NEB7 543 aa18.84■□□□□ 0.61
CBWD3-204ENST00000377349 C9orf43Q8TAL5 461 aaPredicted RBP18.84■□□□□ 0.61
CBWD3-204ENST00000377349 BLOC1S5Q8TDH9 187 aa18.84■□□□□ 0.61
CBWD3-204ENST00000377349 QKIQ96PU8 341 aaKnown RBP eCLIP18.84■□□□□ 0.61
CBWD3-204ENST00000377349 PANX2Q96RD6 677 aa18.84■□□□□ 0.61
CBWD3-204ENST00000377349 FAM118BQ9BPY3 351 aa18.84■□□□□ 0.61
CBWD3-204ENST00000377349 FSD1LQ9BXM9 530 aa18.84■□□□□ 0.61
CBWD3-204ENST00000377349 RAD18Q9NS91 495 aa18.84■□□□□ 0.61
CBWD3-204ENST00000377349 ANAPC2Q9UJX6 822 aa18.84■□□□□ 0.61
CBWD3-204ENST00000377349 TMPRSS11EQ9UL52 423 aa18.84■□□□□ 0.61
CBWD3-204ENST00000377349 CLEC18AA5D8T8 446 aa18.83■□□□□ 0.61
CBWD3-204ENST00000377349 RCCD1A6NED2 376 aa18.83■□□□□ 0.61
CBWD3-204ENST00000377349 GPR89AB7ZAQ6 455 aa18.83■□□□□ 0.61
CBWD3-204ENST00000377349 MTSS1O43312 755 aa18.83■□□□□ 0.61
CBWD3-204ENST00000377349 GPR89BP0CG08 455 aa18.83■□□□□ 0.61
CBWD3-204ENST00000377349 BPIP17213 487 aa18.83■□□□□ 0.61
CBWD3-204ENST00000377349 TYRP1P17643 537 aa18.83■□□□□ 0.61
CBWD3-204ENST00000377349 CHRNA4P43681 627 aa18.83■□□□□ 0.61
CBWD3-204ENST00000377349 SH3BP2P78314 561 aa18.83■□□□□ 0.61
CBWD3-204ENST00000377349 IGFBP7Q16270 282 aa18.83■□□□□ 0.61
CBWD3-204ENST00000377349 TAZQ16635 292 aa18.83■□□□□ 0.61
CBWD3-204ENST00000377349 SIRPB2Q5JXA9 342 aa18.83■□□□□ 0.61
CBWD3-204ENST00000377349 CLEC18BQ6UXF7 455 aa18.83■□□□□ 0.61
CBWD3-204ENST00000377349 TMTC1Q8IUR5 882 aa18.83■□□□□ 0.61
CBWD3-204ENST00000377349 TRAM1L1Q8N609 369 aa18.83■□□□□ 0.61
CBWD3-204ENST00000377349 ESX1Q8N693 406 aa18.83■□□□□ 0.61
CBWD3-204ENST00000377349 AVL9Q8NBF6 648 aa18.83■□□□□ 0.61
CBWD3-204ENST00000377349 CLEC18CQ8NCF0 446 aa18.83■□□□□ 0.61
CBWD3-204ENST00000377349 APOBEC4Q8WW27 367 aaKnown RBP18.83■□□□□ 0.61
CBWD3-204ENST00000377349 GLYATL1Q969I3 302 aa18.83■□□□□ 0.61
CBWD3-204ENST00000377349 ABHD17AQ96GS6 310 aa18.83■□□□□ 0.61
CBWD3-204ENST00000377349 MRFAP1L1Q96HT8 127 aa18.83■□□□□ 0.61
CBWD3-204ENST00000377349 RPS6KL1Q9Y6S9 549 aa18.83■□□□□ 0.61
CBWD3-204ENST00000377349 DUSP10Q9Y6W6 482 aa18.83■□□□□ 0.61
CBWD3-204ENST00000377349 SHANK1Q9Y566 2161 aa18.83■□□□□ 0.6
CBWD3-204ENST00000377349 BUD23O43709 281 aaKnown RBP18.83■□□□□ 0.6
CBWD3-204ENST00000377349 LEPRP48357 1165 aaKnown RBP18.83■□□□□ 0.6
CBWD3-204ENST00000377349 GLT6D1Q7Z4J2 308 aa18.83■□□□□ 0.6
CBWD3-204ENST00000377349 RSC1A1Q92681 617 aa18.83■□□□□ 0.6
CBWD3-204ENST00000377349 ZNF768Q9H5H4 540 aaKnown RBP18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms