RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 S100BP04271 92 aaPredicted RBP19.98■□□□□ 0.79
VSX1-202ENST00000376709 RPS3P23396 243 aaKnown RBP eCLIP19.98■□□□□ 0.79
VSX1-202ENST00000376709 SNRPD1P62314 119 aaKnown RBP19.98■□□□□ 0.79
VSX1-202ENST00000376709 MAP7D1Q3KQU3 841 aa19.98■□□□□ 0.79
VSX1-202ENST00000376709 VPS26BQ4G0F5 336 aa19.98■□□□□ 0.79
VSX1-202ENST00000376709 SAMD4BQ5PRF9 694 aaKnown RBP19.98■□□□□ 0.79
VSX1-202ENST00000376709 DCBLD1Q8N8Z6 715 aa19.98■□□□□ 0.79
VSX1-202ENST00000376709 ICA1LQ8NDH6 482 aa19.98■□□□□ 0.79
VSX1-202ENST00000376709 SLC22A17Q8WUG5 538 aa19.98■□□□□ 0.79
VSX1-202ENST00000376709 CLP1Q92989 425 aaKnown RBP19.98■□□□□ 0.79
VSX1-202ENST00000376709 PLEKHG4BQ96PX9 1271 aa19.98■□□□□ 0.79
VSX1-202ENST00000376709 COPS7BQ9H9Q2 264 aaPredicted RBP19.98■□□□□ 0.79
VSX1-202ENST00000376709 DTNAQ9Y4J8 743 aa19.98■□□□□ 0.79
VSX1-202ENST00000376709 CCL16O15467 120 aa19.97■□□□□ 0.79
VSX1-202ENST00000376709 TRIM16O95361 564 aa19.97■□□□□ 0.79
VSX1-202ENST00000376709 BPIP17213 487 aa19.97■□□□□ 0.79
VSX1-202ENST00000376709 UGT1A6P19224 532 aa19.97■□□□□ 0.79
VSX1-202ENST00000376709 UGT1A1P22309 533 aa19.97■□□□□ 0.79
VSX1-202ENST00000376709 UGT1A4P22310 534 aa19.97■□□□□ 0.79
VSX1-202ENST00000376709 ACRV1P26436 265 aa19.97■□□□□ 0.79
VSX1-202ENST00000376709 UGT1A3P35503 534 aa19.97■□□□□ 0.79
VSX1-202ENST00000376709 UGT1A5P35504 534 aa19.97■□□□□ 0.79
VSX1-202ENST00000376709 CTSOP43234 321 aaPredicted RBP19.97■□□□□ 0.79
VSX1-202ENST00000376709 RGS4P49798 205 aa19.97■□□□□ 0.79
VSX1-202ENST00000376709 SLC7A2P52569 658 aa19.97■□□□□ 0.79
VSX1-202ENST00000376709 ERVFC1P60507 584 aa19.97■□□□□ 0.79
VSX1-202ENST00000376709 PITRM1Q5JRX3 1037 aa19.97■□□□□ 0.79
VSX1-202ENST00000376709 TCF25Q9BQ70 676 aa19.97■□□□□ 0.79
VSX1-202ENST00000376709 C17orf80Q9BSJ5 609 aa19.97■□□□□ 0.79
VSX1-202ENST00000376709 TMEM181Q9P2C4 612 aa19.97■□□□□ 0.79
VSX1-202ENST00000376709 NDUFAF1Q9Y375 327 aa19.97■□□□□ 0.79
VSX1-202ENST00000376709 ZNF106Q9H2Y7 1883 aaKnown RBP19.97■□□□□ 0.79
VSX1-202ENST00000376709 C9JVG2 144 aa19.97■□□□□ 0.79
VSX1-202ENST00000376709 OR4F21O95013 312 aa19.97■□□□□ 0.79
VSX1-202ENST00000376709 MATN4O95460 622 aa19.97■□□□□ 0.79
VSX1-202ENST00000376709 SRCP12931 536 aa19.97■□□□□ 0.79
VSX1-202ENST00000376709 CA5AP35218 305 aa19.97■□□□□ 0.79
VSX1-202ENST00000376709 SPAM1P38567 509 aa19.97■□□□□ 0.79
VSX1-202ENST00000376709 DIO3P55073 304 aa19.97■□□□□ 0.79
VSX1-202ENST00000376709 ADGRE1Q14246 886 aa19.97■□□□□ 0.79
VSX1-202ENST00000376709 OGFOD2Q6N063 350 aa19.97■□□□□ 0.79
VSX1-202ENST00000376709 SCIMPQ6UWF3 145 aa19.97■□□□□ 0.79
VSX1-202ENST00000376709 RETREG3Q86VR2 466 aa19.97■□□□□ 0.79
VSX1-202ENST00000376709 ZSWIM9Q86XI8 627 aa19.97■□□□□ 0.79
VSX1-202ENST00000376709 MYO1HQ8N1T3 1032 aa19.97■□□□□ 0.79
VSX1-202ENST00000376709 CDYL2Q8N8U2 506 aa19.97■□□□□ 0.79
VSX1-202ENST00000376709 OR52B6Q8NGF0 335 aa19.97■□□□□ 0.79
VSX1-202ENST00000376709 CDK15Q96Q40 435 aa19.97■□□□□ 0.79
VSX1-202ENST00000376709 ZNF382Q96SR6 550 aa19.97■□□□□ 0.79
VSX1-202ENST00000376709 ACOX2Q99424 681 aa19.97■□□□□ 0.79
VSX1-202ENST00000376709 C19orf43Q9BQ61 176 aa19.97■□□□□ 0.79
VSX1-202ENST00000376709 IL1RL2Q9HB29 575 aa19.97■□□□□ 0.79
VSX1-202ENST00000376709 HIDE1A8MVS5 230 aa19.96■□□□□ 0.79
VSX1-202ENST00000376709 SLC25A14O95258 325 aaPredicted RBP19.96■□□□□ 0.79
VSX1-202ENST00000376709 CAPN3P20807 821 aa19.96■□□□□ 0.79
VSX1-202ENST00000376709 HLA-FP30511 346 aa19.96■□□□□ 0.79
VSX1-202ENST00000376709 CDKN3Q16667 212 aa19.96■□□□□ 0.79
VSX1-202ENST00000376709 LYPLAL1Q5VWZ2 237 aa19.96■□□□□ 0.79
VSX1-202ENST00000376709 PLPP4Q5VZY2 271 aa19.96■□□□□ 0.79
VSX1-202ENST00000376709 GRAMD4Q6IC98 578 aa19.96■□□□□ 0.79
VSX1-202ENST00000376709 C8orf82Q6P1X6 216 aaPredicted RBP19.96■□□□□ 0.79
VSX1-202ENST00000376709 SBSNQ6UWP8 590 aa19.96■□□□□ 0.79
VSX1-202ENST00000376709 SPATA19Q7Z5L4 167 aa19.96■□□□□ 0.79
VSX1-202ENST00000376709 TSPAN33Q86UF1 283 aa19.96■□□□□ 0.79
VSX1-202ENST00000376709 BADQ92934 168 aa19.96■□□□□ 0.79
VSX1-202ENST00000376709 ASIC4Q96FT7 647 aa19.96■□□□□ 0.79
VSX1-202ENST00000376709 NOL11Q9H8H0 719 aaKnown RBP19.96■□□□□ 0.79
VSX1-202ENST00000376709 CCL26Q9Y258 94 aa19.96■□□□□ 0.79
VSX1-202ENST00000376709 INSL6Q9Y581 213 aa19.96■□□□□ 0.79
VSX1-202ENST00000376709 TNPO3Q9Y5L0 923 aaKnown RBP19.96■□□□□ 0.79
VSX1-202ENST00000376709 PRSS21Q9Y6M0 314 aa19.96■□□□□ 0.79
VSX1-202ENST00000376709 DOCK6Q96HP0 2047 aa19.96■□□□□ 0.79
VSX1-202ENST00000376709 MYOFQ9NZM1 2061 aa19.96■□□□□ 0.79
VSX1-202ENST00000376709 NPIPB15A6NHN6 443 aaPredicted RBP19.95■□□□□ 0.78
VSX1-202ENST00000376709 RAD51BO15315 384 aa19.95■□□□□ 0.78
VSX1-202ENST00000376709 UQCRBP14927 111 aa19.95■□□□□ 0.78
VSX1-202ENST00000376709 SEMG2Q02383 582 aa19.95■□□□□ 0.78
VSX1-202ENST00000376709 MED21Q13503 144 aa19.95■□□□□ 0.78
VSX1-202ENST00000376709 CHRNA6Q15825 494 aa19.95■□□□□ 0.78
VSX1-202ENST00000376709 XKR7Q5GH72 579 aa19.95■□□□□ 0.78
VSX1-202ENST00000376709 OR52E8Q6IFG1 317 aa19.95■□□□□ 0.78
VSX1-202ENST00000376709 TMEM126BQ8IUX1 230 aa19.95■□□□□ 0.78
VSX1-202ENST00000376709 HCFC1R1Q9NWW0 138 aa19.95■□□□□ 0.78
VSX1-202ENST00000376709 CD300AQ9UGN4 299 aa19.95■□□□□ 0.78
VSX1-202ENST00000376709 RIMS3Q9UJD0 308 aa19.95■□□□□ 0.78
VSX1-202ENST00000376709 HELZP42694 1942 aaKnown RBP19.95■□□□□ 0.78
VSX1-202ENST00000376709 FFAR2O15552 330 aa19.95■□□□□ 0.78
VSX1-202ENST00000376709 DGKAP23743 735 aa19.95■□□□□ 0.78
VSX1-202ENST00000376709 IRX1P78414 480 aaPredicted RBP19.95■□□□□ 0.78
VSX1-202ENST00000376709 TRAP1Q12931 704 aaKnown RBP19.95■□□□□ 0.78
VSX1-202ENST00000376709 LKAAEAR1Q8TD35 194 aa19.95■□□□□ 0.78
VSX1-202ENST00000376709 RIC8BQ9NVN3 520 aa19.95■□□□□ 0.78
VSX1-202ENST00000376709 SUFUQ9UMX1 484 aa19.95■□□□□ 0.78
VSX1-202ENST00000376709 GPR45Q9Y5Y3 372 aa19.95■□□□□ 0.78
VSX1-202ENST00000376709 PIKFYVEQ9Y2I7 2098 aa19.94■□□□□ 0.78
VSX1-202ENST00000376709 TRBV5-4A0A0C4DH59 114 aa19.94■□□□□ 0.78
VSX1-202ENST00000376709 PRSS51A0A1B0GVH4 220 aa19.94■□□□□ 0.78
VSX1-202ENST00000376709 RNASEH1O60930 286 aaKnown RBP19.94■□□□□ 0.78
VSX1-202ENST00000376709 STAMBPO95630 424 aa19.94■□□□□ 0.78
VSX1-202ENST00000376709 GUCA1CO95843 209 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms