RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 STX5Q13190 355 aa13.84□□□□□ -0.19
MSH5-202ENST00000375740 DHRS4L2Q6PKH6 230 aa13.84□□□□□ -0.19
MSH5-202ENST00000375740 NKAPQ8N5F7 415 aaKnown RBP13.84□□□□□ -0.19
MSH5-202ENST00000375740 ARL10Q8N8L6 244 aa13.84□□□□□ -0.19
MSH5-202ENST00000375740 ADCY4Q8NFM4 1077 aa13.84□□□□□ -0.19
MSH5-202ENST00000375740 GFM2Q969S9 779 aaKnown RBP13.84□□□□□ -0.19
MSH5-202ENST00000375740 FUBP1Q96AE4 644 aaKnown RBP13.84□□□□□ -0.19
MSH5-202ENST00000375740 EID2BQ96D98 161 aa13.84□□□□□ -0.19
MSH5-202ENST00000375740 KCNA7Q96RP8 456 aa13.84□□□□□ -0.19
MSH5-202ENST00000375740 TM6SF2Q9BZW4 377 aa13.84□□□□□ -0.19
MSH5-202ENST00000375740 AKTIPQ9H8T0 292 aa13.84□□□□□ -0.19
MSH5-202ENST00000375740 RC3H2Q9HBD1 1191 aaKnown RBP13.84□□□□□ -0.19
MSH5-202ENST00000375740 HACD3Q9P035 362 aa13.84□□□□□ -0.19
MSH5-202ENST00000375740 PCDH10Q9P2E7 1040 aa13.84□□□□□ -0.19
MSH5-202ENST00000375740 DNMT3BQ9UBC3 853 aaKnown RBP13.84□□□□□ -0.19
MSH5-202ENST00000375740 VPS9D1Q9Y2B5 631 aa13.84□□□□□ -0.19
MSH5-202ENST00000375740 PTGDR2Q9Y5Y4 395 aa13.84□□□□□ -0.19
MSH5-202ENST00000375740 PFDN6O15212 129 aa13.83□□□□□ -0.2
MSH5-202ENST00000375740 GPR39O43194 453 aa13.83□□□□□ -0.2
MSH5-202ENST00000375740 CSPG5O95196 566 aa13.83□□□□□ -0.2
MSH5-202ENST00000375740 OLFM2O95897 454 aa13.83□□□□□ -0.2
MSH5-202ENST00000375740 LAG3P18627 525 aa13.83□□□□□ -0.2
MSH5-202ENST00000375740 CHRM3P20309 590 aa13.83□□□□□ -0.2
MSH5-202ENST00000375740 CYP4F8P98187 520 aa13.83□□□□□ -0.2
MSH5-202ENST00000375740 CLCQ05315 142 aa13.83□□□□□ -0.2
MSH5-202ENST00000375740 GEN1Q17RS7 908 aa13.83□□□□□ -0.2
MSH5-202ENST00000375740 DNAJC14Q6Y2X3 702 aaPredicted RBP13.83□□□□□ -0.2
MSH5-202ENST00000375740 CAMK1DQ8IU85 385 aa13.83□□□□□ -0.2
MSH5-202ENST00000375740 CROCCP3Q8IVE0 287 aa13.83□□□□□ -0.2
MSH5-202ENST00000375740 TMEM102Q8N9M5 508 aaPredicted RBP13.83□□□□□ -0.2
MSH5-202ENST00000375740 OR6K2Q8NGY2 324 aa13.83□□□□□ -0.2
MSH5-202ENST00000375740 EEF1AKMT1Q8WVE0 214 aa13.83□□□□□ -0.2
MSH5-202ENST00000375740 MRGBPQ9NV56 204 aa13.83□□□□□ -0.2
MSH5-202ENST00000375740 UTP6Q9NYH9 597 aaKnown RBP13.83□□□□□ -0.2
MSH5-202ENST00000375740 IL17CQ9P0M4 197 aa13.83□□□□□ -0.2
MSH5-202ENST00000375740 CDC14AQ9UNH5 594 aa13.83□□□□□ -0.2
MSH5-202ENST00000375740 COQ6Q9Y2Z9 468 aa13.83□□□□□ -0.2
MSH5-202ENST00000375740 A0A1B0GTL3 188 aa13.83□□□□□ -0.2
MSH5-202ENST00000375740 ABHD14A-ACY1A0A1B0GW23 586 aa13.83□□□□□ -0.2
MSH5-202ENST00000375740 NCF1BA6NI72 391 aaPredicted RBP13.83□□□□□ -0.2
MSH5-202ENST00000375740 NCF1CA8MVU1 366 aaPredicted RBP13.83□□□□□ -0.2
MSH5-202ENST00000375740 H7C0S8 307 aa13.83□□□□□ -0.2
MSH5-202ENST00000375740 BTN3A1O00481 513 aa13.83□□□□□ -0.2
MSH5-202ENST00000375740 SMAD6O43541 496 aaKnown RBP13.83□□□□□ -0.2
MSH5-202ENST00000375740 SNRPB2P08579 225 aaKnown RBP13.83□□□□□ -0.2
MSH5-202ENST00000375740 ALPIP09923 528 aa13.83□□□□□ -0.2
MSH5-202ENST00000375740 NCF1P14598 390 aaPredicted RBP13.83□□□□□ -0.2
MSH5-202ENST00000375740 IDO1P14902 403 aa13.83□□□□□ -0.2
MSH5-202ENST00000375740 PSME3P61289 254 aa13.83□□□□□ -0.2
MSH5-202ENST00000375740 LRP8Q14114 963 aa13.83□□□□□ -0.2
MSH5-202ENST00000375740 MAPRE2Q15555 327 aa13.83□□□□□ -0.2
MSH5-202ENST00000375740 XKR5Q6UX68 686 aa13.83□□□□□ -0.2
MSH5-202ENST00000375740 LYSMD3Q7Z3D4 306 aa13.83□□□□□ -0.2
MSH5-202ENST00000375740 ITIH5Q86UX2 942 aa13.83□□□□□ -0.2
MSH5-202ENST00000375740 CLVS1Q8IUQ0 354 aaPredicted RBP13.83□□□□□ -0.2
MSH5-202ENST00000375740 MYO1HQ8N1T3 1032 aa13.83□□□□□ -0.2
MSH5-202ENST00000375740 OR9I1Q8NGQ6 314 aa13.83□□□□□ -0.2
MSH5-202ENST00000375740 TWIST2Q8WVJ9 160 aa13.83□□□□□ -0.2
MSH5-202ENST00000375740 GPR63Q9BZJ6 419 aa13.83□□□□□ -0.2
MSH5-202ENST00000375740 COQ10BQ9H8M1 238 aa13.83□□□□□ -0.2
MSH5-202ENST00000375740 SEMA4BQ9NPR2 832 aaPredicted RBP13.83□□□□□ -0.2
MSH5-202ENST00000375740 OLAHQ9NV23 265 aa13.83□□□□□ -0.2
MSH5-202ENST00000375740 GIMAP2Q9UG22 337 aa13.83□□□□□ -0.2
MSH5-202ENST00000375740 TRMT6Q9UJA5 497 aaKnown RBP13.83□□□□□ -0.2
MSH5-202ENST00000375740 PCDHGA7Q9Y5G6 932 aa13.83□□□□□ -0.2
MSH5-202ENST00000375740 IQCF5A8MTL0 148 aa13.82□□□□□ -0.2
MSH5-202ENST00000375740 PIP5K1BO14986 540 aa13.82□□□□□ -0.2
MSH5-202ENST00000375740 TSPAN12O95859 305 aa13.82□□□□□ -0.2
MSH5-202ENST00000375740 ALDOCP09972 364 aaKnown RBP13.82□□□□□ -0.2
MSH5-202ENST00000375740 GABRR2P28476 465 aa13.82□□□□□ -0.2
MSH5-202ENST00000375740 CA8P35219 290 aa13.82□□□□□ -0.2
MSH5-202ENST00000375740 CLCN4P51793 760 aa13.82□□□□□ -0.2
MSH5-202ENST00000375740 ADRM1Q16186 407 aa13.82□□□□□ -0.2
MSH5-202ENST00000375740 ARMC12Q5T9G4 340 aa13.82□□□□□ -0.2
MSH5-202ENST00000375740 KANK2Q63ZY3 851 aa13.82□□□□□ -0.2
MSH5-202ENST00000375740 ANKS6Q68DC2 871 aa13.82□□□□□ -0.2
MSH5-202ENST00000375740 REP15Q6BDI9 236 aa13.82□□□□□ -0.2
MSH5-202ENST00000375740 HS6ST3Q8IZP7 471 aa13.82□□□□□ -0.2
MSH5-202ENST00000375740 DCAF4L2Q8NA75 395 aa13.82□□□□□ -0.2
MSH5-202ENST00000375740 CD200R1Q8TD46 325 aa13.82□□□□□ -0.2
MSH5-202ENST00000375740 PIH1D2Q8WWB5 315 aa13.82□□□□□ -0.2
MSH5-202ENST00000375740 COX4I2Q96KJ9 171 aa13.82□□□□□ -0.2
MSH5-202ENST00000375740 NEURL2Q9BR09 285 aa13.82□□□□□ -0.2
MSH5-202ENST00000375740 SAGE1Q9NXZ1 904 aa13.82□□□□□ -0.2
MSH5-202ENST00000375740 ADA2Q9NZK5 511 aa13.82□□□□□ -0.2
MSH5-202ENST00000375740 PKP3Q9Y446 797 aa13.82□□□□□ -0.2
MSH5-202ENST00000375740 OBSL1O75147 1896 aa13.82□□□□□ -0.2
MSH5-202ENST00000375740 PRSS51A0A1B0GVH4 220 aa13.82□□□□□ -0.2
MSH5-202ENST00000375740 SYCE1LA8MT33 242 aa13.82□□□□□ -0.2
MSH5-202ENST00000375740 E2F6O75461 281 aa13.82□□□□□ -0.2
MSH5-202ENST00000375740 H6PDO95479 791 aa13.82□□□□□ -0.2
MSH5-202ENST00000375740 BMP1P13497 986 aa13.82□□□□□ -0.2
MSH5-202ENST00000375740 GJA8P48165 433 aa13.82□□□□□ -0.2
MSH5-202ENST00000375740 IL2P60568 153 aa13.82□□□□□ -0.2
MSH5-202ENST00000375740 IL23RQ5VWK5 629 aa13.82□□□□□ -0.2
MSH5-202ENST00000375740 NANOGP8Q6NSW7 305 aa13.82□□□□□ -0.2
MSH5-202ENST00000375740 GAREM2Q75VX8 874 aa13.82□□□□□ -0.2
MSH5-202ENST00000375740 DDIASQ8IXT1 998 aa13.82□□□□□ -0.2
MSH5-202ENST00000375740 C12orf43Q96C57 262 aaKnown RBP13.82□□□□□ -0.2
MSH5-202ENST00000375740 SLC29A1Q99808 456 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms