RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 ITFG2Q969R8 447 aa11.67□□□□□ -0.54
MCF2L-202ENST00000375597 FAR2Q96K12 515 aa11.67□□□□□ -0.54
MCF2L-202ENST00000375597 FAM193BQ96PV7 902 aaPredicted RBP11.67□□□□□ -0.54
MCF2L-202ENST00000375597 NSUN3Q9H649 340 aaKnown RBP11.67□□□□□ -0.54
MCF2L-202ENST00000375597 CCM2LQ9NUG4 571 aaPredicted RBP11.67□□□□□ -0.54
MCF2L-202ENST00000375597 TAS2R13Q9NYV9 303 aa11.67□□□□□ -0.54
MCF2L-202ENST00000375597 CXCL11O14625 94 aa11.67□□□□□ -0.54
MCF2L-202ENST00000375597 CPSF4O95639 269 aaKnown RBP11.67□□□□□ -0.54
MCF2L-202ENST00000375597 C1QCP02747 245 aa11.67□□□□□ -0.54
MCF2L-202ENST00000375597 C8BP07358 591 aa11.67□□□□□ -0.54
MCF2L-202ENST00000375597 CDH3P22223 829 aa11.67□□□□□ -0.54
MCF2L-202ENST00000375597 IL12AP29459 219 aa11.67□□□□□ -0.54
MCF2L-202ENST00000375597 MC4RP32245 332 aa11.67□□□□□ -0.54
MCF2L-202ENST00000375597 OPRL1P41146 370 aa11.67□□□□□ -0.54
MCF2L-202ENST00000375597 GATMP50440 423 aa11.67□□□□□ -0.54
MCF2L-202ENST00000375597 MLLT10P55197 1068 aa11.67□□□□□ -0.54
MCF2L-202ENST00000375597 SLC13A2Q13183 592 aa11.67□□□□□ -0.54
MCF2L-202ENST00000375597 FSCN1Q16658 493 aaKnown RBP11.67□□□□□ -0.54
MCF2L-202ENST00000375597 ANKRD26P1Q6NSI1 321 aa11.67□□□□□ -0.54
MCF2L-202ENST00000375597 SCD5Q86SK9 330 aa11.67□□□□□ -0.54
MCF2L-202ENST00000375597 DTWD1Q8N5C7 304 aa11.67□□□□□ -0.54
MCF2L-202ENST00000375597 RTL3Q8N8U3 475 aaKnown RBP11.67□□□□□ -0.54
MCF2L-202ENST00000375597 BRI3BPQ8WY22 251 aa11.67□□□□□ -0.54
MCF2L-202ENST00000375597 NTAN1Q96AB6 310 aa11.67□□□□□ -0.54
MCF2L-202ENST00000375597 CCDC126Q96EE4 140 aa11.67□□□□□ -0.54
MCF2L-202ENST00000375597 ZNF385DQ9H6B1 395 aa11.67□□□□□ -0.54
MCF2L-202ENST00000375597 PCDHB9Q9Y5E1 797 aa11.67□□□□□ -0.54
MCF2L-202ENST00000375597 PCDHB3Q9Y5E6 796 aa11.67□□□□□ -0.54
MCF2L-202ENST00000375597 SDK1Q7Z5N4 2213 aa11.67□□□□□ -0.54
MCF2L-202ENST00000375597 TBC1D4O60343 1298 aa11.67□□□□□ -0.54
MCF2L-202ENST00000375597 NADKO95544 446 aaPredicted RBP11.67□□□□□ -0.54
MCF2L-202ENST00000375597 CCL23P55773 120 aa11.67□□□□□ -0.54
MCF2L-202ENST00000375597 TP53BP2Q13625 1128 aa11.67□□□□□ -0.54
MCF2L-202ENST00000375597 SPCS2Q15005 226 aa11.67□□□□□ -0.54
MCF2L-202ENST00000375597 FAM180BQ6P0A1 224 aa11.67□□□□□ -0.54
MCF2L-202ENST00000375597 MICU2Q8IYU8 434 aa11.67□□□□□ -0.54
MCF2L-202ENST00000375597 ST13P5Q8NFI4 369 aaPredicted RBP11.67□□□□□ -0.54
MCF2L-202ENST00000375597 TNIP2Q8NFZ5 429 aa11.67□□□□□ -0.54
MCF2L-202ENST00000375597 SNX19Q92543 992 aa11.67□□□□□ -0.54
MCF2L-202ENST00000375597 RPL3LQ92901 407 aaKnown RBP11.67□□□□□ -0.54
MCF2L-202ENST00000375597 TAMM41Q96BW9 452 aa11.67□□□□□ -0.54
MCF2L-202ENST00000375597 NRBF2Q96F24 287 aa11.67□□□□□ -0.54
MCF2L-202ENST00000375597 BDH2Q9BUT1 245 aa11.67□□□□□ -0.54
MCF2L-202ENST00000375597 KATNAL1Q9BW62 490 aa11.67□□□□□ -0.54
MCF2L-202ENST00000375597 EBPLQ9BY08 206 aa11.67□□□□□ -0.54
MCF2L-202ENST00000375597 ANKRD60Q9BZ19 345 aa11.67□□□□□ -0.54
MCF2L-202ENST00000375597 GPR63Q9BZJ6 419 aa11.67□□□□□ -0.54
MCF2L-202ENST00000375597 TREX1Q9NSU2 369 aa11.67□□□□□ -0.54
MCF2L-202ENST00000375597 SLC38A7Q9NVC3 462 aa11.67□□□□□ -0.54
MCF2L-202ENST00000375597 CDH9Q9ULB4 789 aa11.67□□□□□ -0.54
MCF2L-202ENST00000375597 PADI3Q9ULW8 664 aa11.67□□□□□ -0.54
MCF2L-202ENST00000375597 G3V2T6 193 aa11.66□□□□□ -0.54
MCF2L-202ENST00000375597 SNAP91O60641 907 aa11.66□□□□□ -0.54
MCF2L-202ENST00000375597 SERPINF2P08697 491 aa11.66□□□□□ -0.54
MCF2L-202ENST00000375597 TXNL4AP83876 142 aaKnown RBP11.66□□□□□ -0.54
MCF2L-202ENST00000375597 RFTN2Q52LD8 501 aaPredicted RBP11.66□□□□□ -0.54
MCF2L-202ENST00000375597 INTS6LQ5JSJ4 861 aaKnown RBP11.66□□□□□ -0.54
MCF2L-202ENST00000375597 GPRIN3Q6ZVF9 776 aa11.66□□□□□ -0.54
MCF2L-202ENST00000375597 LINC01465Q8N7H1 131 aa11.66□□□□□ -0.54
MCF2L-202ENST00000375597 LMNTD1Q8N9Z9 388 aa11.66□□□□□ -0.54
MCF2L-202ENST00000375597 ZNF555Q8NEP9 628 aa11.66□□□□□ -0.54
MCF2L-202ENST00000375597 OR52J3Q8NH60 311 aa11.66□□□□□ -0.54
MCF2L-202ENST00000375597 NT5C3BQ969T7 300 aa11.66□□□□□ -0.54
MCF2L-202ENST00000375597 CINPQ9BW66 212 aaPredicted RBP11.66□□□□□ -0.54
MCF2L-202ENST00000375597 SLC2A11Q9BYW1 496 aa11.66□□□□□ -0.54
MCF2L-202ENST00000375597 SLC25A51Q9H1U9 297 aa11.66□□□□□ -0.54
MCF2L-202ENST00000375597 CD300AQ9UGN4 299 aa11.66□□□□□ -0.54
MCF2L-202ENST00000375597 ANK1P16157 1881 aa11.66□□□□□ -0.54
MCF2L-202ENST00000375597 MGEA5O60502 916 aa11.66□□□□□ -0.54
MCF2L-202ENST00000375597 RECQL5O94762 991 aaPredicted RBP11.66□□□□□ -0.54
MCF2L-202ENST00000375597 DLGAP3O95886 979 aa11.66□□□□□ -0.54
MCF2L-202ENST00000375597 DBTP11182 482 aaKnown RBP11.66□□□□□ -0.54
MCF2L-202ENST00000375597 NUDT6P53370 316 aa11.66□□□□□ -0.54
MCF2L-202ENST00000375597 LCP2Q13094 533 aa11.66□□□□□ -0.54
MCF2L-202ENST00000375597 HERC3Q15034 1050 aa11.66□□□□□ -0.54
MCF2L-202ENST00000375597 RGS21Q2M5E4 152 aa11.66□□□□□ -0.54
MCF2L-202ENST00000375597 SPANXN4Q5MJ08 99 aa11.66□□□□□ -0.54
MCF2L-202ENST00000375597 FAM171A1Q5VUB5 890 aa11.66□□□□□ -0.54
MCF2L-202ENST00000375597 TIGD7Q6NT04 549 aaPredicted RBP11.66□□□□□ -0.54
MCF2L-202ENST00000375597 ALKAL1Q6UXT8 129 aa11.66□□□□□ -0.54
MCF2L-202ENST00000375597 RNF19BQ6ZMZ0 732 aa11.66□□□□□ -0.54
MCF2L-202ENST00000375597 Q6ZPB1 254 aaPredicted RBP11.66□□□□□ -0.54
MCF2L-202ENST00000375597 NEK10Q6ZWH5 1172 aa11.66□□□□□ -0.54
MCF2L-202ENST00000375597 SYTL1Q8IYJ3 562 aa11.66□□□□□ -0.54
MCF2L-202ENST00000375597 STAG3L4Q8TBR4 150 aa11.66□□□□□ -0.54
MCF2L-202ENST00000375597 RTP3Q9BQQ7 232 aa11.66□□□□□ -0.54
MCF2L-202ENST00000375597 ZYG11BQ9C0D3 744 aa11.66□□□□□ -0.54
MCF2L-202ENST00000375597 HIPK3Q9H422 1215 aa11.66□□□□□ -0.54
MCF2L-202ENST00000375597 RAD21L1Q9H4I0 556 aa11.66□□□□□ -0.54
MCF2L-202ENST00000375597 ABCC13Q9NSE7 274 aa11.66□□□□□ -0.54
MCF2L-202ENST00000375597 WWOXQ9NZC7 414 aa11.66□□□□□ -0.54
MCF2L-202ENST00000375597 TBC1D30Q9Y2I9 924 aa11.66□□□□□ -0.54
MCF2L-202ENST00000375597 SNX8Q9Y5X2 465 aa11.66□□□□□ -0.54
MCF2L-202ENST00000375597 PNMA8CA0A1B0GUJ8 204 aa11.66□□□□□ -0.54
MCF2L-202ENST00000375597 SMIM30A4D0T7 59 aa11.66□□□□□ -0.54
MCF2L-202ENST00000375597 DLGAP1O14490 977 aa11.66□□□□□ -0.54
MCF2L-202ENST00000375597 PENKP01210 267 aaPredicted RBP11.66□□□□□ -0.54
MCF2L-202ENST00000375597 THRBP10828 461 aa11.66□□□□□ -0.54
MCF2L-202ENST00000375597 POU2F1P14859 743 aa11.66□□□□□ -0.54
MCF2L-202ENST00000375597 NFATC3Q12968 1075 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms