RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 TRIM44Q96DX7 344 aaPredicted RBP20.66■□□□□ 0.9
MAP1LC3A-202ENST00000374837 ZNF514Q96K75 400 aaPredicted RBP20.66■□□□□ 0.9
MAP1LC3A-202ENST00000374837 SERPINB12Q96P63 405 aa20.66■□□□□ 0.9
MAP1LC3A-202ENST00000374837 KRT12Q99456 494 aa20.66■□□□□ 0.9
MAP1LC3A-202ENST00000374837 ABCG4Q9H172 646 aa20.66■□□□□ 0.9
MAP1LC3A-202ENST00000374837 MRM3Q9HC36 420 aaKnown RBP20.66■□□□□ 0.9
MAP1LC3A-202ENST00000374837 XAB2Q9HCS7 855 aaKnown RBP20.66■□□□□ 0.9
MAP1LC3A-202ENST00000374837 PRDM8Q9NQV8 689 aa20.66■□□□□ 0.9
MAP1LC3A-202ENST00000374837 TREX1Q9NSU2 369 aa20.66■□□□□ 0.9
MAP1LC3A-202ENST00000374837 LRIT1Q9P2V4 623 aa20.66■□□□□ 0.9
MAP1LC3A-202ENST00000374837 DNMT3AQ9Y6K1 912 aaPredicted RBP20.66■□□□□ 0.9
MAP1LC3A-202ENST00000374837 IGLV3-16A0A075B6K0 115 aa20.65■□□□□ 0.9
MAP1LC3A-202ENST00000374837 FAM149AA5PLN7 773 aa20.65■□□□□ 0.9
MAP1LC3A-202ENST00000374837 A6NCN8 305 aa20.65■□□□□ 0.9
MAP1LC3A-202ENST00000374837 CASC3O15234 703 aaKnown RBP20.65■□□□□ 0.9
MAP1LC3A-202ENST00000374837 TTI1O43156 1089 aa20.65■□□□□ 0.9
MAP1LC3A-202ENST00000374837 KCNJ13O60928 360 aa20.65■□□□□ 0.9
MAP1LC3A-202ENST00000374837 PROS1P07225 676 aa20.65■□□□□ 0.9
MAP1LC3A-202ENST00000374837 RALBP11234 206 aa20.65■□□□□ 0.9
MAP1LC3A-202ENST00000374837 HES3Q5TGS1 186 aa20.65■□□□□ 0.9
MAP1LC3A-202ENST00000374837 IYDQ6PHW0 289 aa20.65■□□□□ 0.9
MAP1LC3A-202ENST00000374837 AFTPHQ6ULP2 937 aa20.65■□□□□ 0.9
MAP1LC3A-202ENST00000374837 CES3Q6UWW8 571 aa20.65■□□□□ 0.9
MAP1LC3A-202ENST00000374837 AMZ2Q86W34 360 aa20.65■□□□□ 0.9
MAP1LC3A-202ENST00000374837 GALNT15Q8N3T1 639 aa20.65■□□□□ 0.9
MAP1LC3A-202ENST00000374837 BEND7Q8N7W2 519 aaPredicted RBP20.65■□□□□ 0.9
MAP1LC3A-202ENST00000374837 OR4L1Q8NH43 312 aa20.65■□□□□ 0.9
MAP1LC3A-202ENST00000374837 TRIM51Q9BSJ1 452 aa20.65■□□□□ 0.9
MAP1LC3A-202ENST00000374837 OSGEPL1Q9H4B0 414 aa20.65■□□□□ 0.9
MAP1LC3A-202ENST00000374837 SOX13Q9UN79 622 aa20.65■□□□□ 0.9
MAP1LC3A-202ENST00000374837 NEUROG3Q9Y4Z2 214 aa20.65■□□□□ 0.9
MAP1LC3A-202ENST00000374837 SDR42E2A6NKP2 422 aa20.64■□□□□ 0.89
MAP1LC3A-202ENST00000374837 CFAP99D6REC4 459 aa20.64■□□□□ 0.89
MAP1LC3A-202ENST00000374837 NUDT21O43809 227 aaKnown RBP20.64■□□□□ 0.89
MAP1LC3A-202ENST00000374837 MT-CO3P00414 261 aa20.64■□□□□ 0.89
MAP1LC3A-202ENST00000374837 ATP1B2P14415 290 aaPredicted RBP20.64■□□□□ 0.89
MAP1LC3A-202ENST00000374837 JUPP14923 745 aa20.64■□□□□ 0.89
MAP1LC3A-202ENST00000374837 PRAMEP78395 509 aa20.64■□□□□ 0.89
MAP1LC3A-202ENST00000374837 DHX34Q14147 1143 aaKnown RBP20.64■□□□□ 0.89
MAP1LC3A-202ENST00000374837 BCL7AQ4VC05 210 aa20.64■□□□□ 0.89
MAP1LC3A-202ENST00000374837 IZUMO3Q5VZ72 239 aa20.64■□□□□ 0.89
MAP1LC3A-202ENST00000374837 SFRP1Q8N474 314 aa20.64■□□□□ 0.89
MAP1LC3A-202ENST00000374837 Q8N9G6 341 aaPredicted RBP20.64■□□□□ 0.89
MAP1LC3A-202ENST00000374837 SLC37A2Q8TED4 501 aa20.64■□□□□ 0.89
MAP1LC3A-202ENST00000374837 MFSD3Q96ES6 412 aa20.64■□□□□ 0.89
MAP1LC3A-202ENST00000374837 SGSM3Q96HU1 749 aa20.64■□□□□ 0.89
MAP1LC3A-202ENST00000374837 PPM1DO15297 605 aa20.63■□□□□ 0.89
MAP1LC3A-202ENST00000374837 F3P13726 295 aa20.63■□□□□ 0.89
MAP1LC3A-202ENST00000374837 PNLIPP16233 465 aa20.63■□□□□ 0.89
MAP1LC3A-202ENST00000374837 VCLP18206 1134 aa20.63■□□□□ 0.89
MAP1LC3A-202ENST00000374837 IDSP22304 550 aa20.63■□□□□ 0.89
MAP1LC3A-202ENST00000374837 MAGEA3P43357 314 aa20.63■□□□□ 0.89
MAP1LC3A-202ENST00000374837 CCL7P80098 99 aa20.63■□□□□ 0.89
MAP1LC3A-202ENST00000374837 CDCP2Q5VXM1 449 aa20.63■□□□□ 0.89
MAP1LC3A-202ENST00000374837 CCNI2Q6ZMN8 369 aaPredicted RBP20.63■□□□□ 0.89
MAP1LC3A-202ENST00000374837 FAM83HQ6ZRV2 1179 aaPredicted RBP20.63■□□□□ 0.89
MAP1LC3A-202ENST00000374837 PCGF5Q86SE9 256 aa20.63■□□□□ 0.89
MAP1LC3A-202ENST00000374837 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.63■□□□□ 0.89
MAP1LC3A-202ENST00000374837 LINC00615Q96LM1 132 aaPredicted RBP20.63■□□□□ 0.89
MAP1LC3A-202ENST00000374837 SCHIP1Q9P0W5 487 aaPredicted RBP20.63■□□□□ 0.89
MAP1LC3A-202ENST00000374837 MSRB2Q9Y3D2 182 aa20.63■□□□□ 0.89
MAP1LC3A-202ENST00000374837 MGAT4DA6NG13 374 aa20.62■□□□□ 0.89
MAP1LC3A-202ENST00000374837 OR5K4A6NMS3 321 aa20.62■□□□□ 0.89
MAP1LC3A-202ENST00000374837 RHPN2P1A8MT19 583 aa20.62■□□□□ 0.89
MAP1LC3A-202ENST00000374837 PBLDP30039 288 aaPredicted RBP20.62■□□□□ 0.89
MAP1LC3A-202ENST00000374837 MRPS25P82663 173 aaKnown RBP20.62■□□□□ 0.89
MAP1LC3A-202ENST00000374837 C2orf54Q08AI8 447 aa20.62■□□□□ 0.89
MAP1LC3A-202ENST00000374837 DMPKQ09013 629 aa20.62■□□□□ 0.89
MAP1LC3A-202ENST00000374837 BIRC2Q13490 618 aa20.62■□□□□ 0.89
MAP1LC3A-202ENST00000374837 SEMA3AQ14563 771 aa20.62■□□□□ 0.89
MAP1LC3A-202ENST00000374837 ITIH4Q14624 930 aa20.62■□□□□ 0.89
MAP1LC3A-202ENST00000374837 FASTKD1Q53R41 847 aaKnown RBP20.62■□□□□ 0.89
MAP1LC3A-202ENST00000374837 ARMC3Q5W041 872 aa20.62■□□□□ 0.89
MAP1LC3A-202ENST00000374837 CASC4Q6P4E1 433 aa20.62■□□□□ 0.89
MAP1LC3A-202ENST00000374837 ABRAXAS1Q6UWZ7 409 aa20.62■□□□□ 0.89
MAP1LC3A-202ENST00000374837 WASH2PQ6VEQ5 465 aa20.62■□□□□ 0.89
MAP1LC3A-202ENST00000374837 ZNF438Q7Z4V0 828 aa20.62■□□□□ 0.89
MAP1LC3A-202ENST00000374837 CACTIN-AS1Q8N1I8 211 aa20.62■□□□□ 0.89
MAP1LC3A-202ENST00000374837 AGGF1Q8N302 714 aaeCLIP20.62■□□□□ 0.89
MAP1LC3A-202ENST00000374837 CLDN19Q8N6F1 224 aa20.62■□□□□ 0.89
MAP1LC3A-202ENST00000374837 SIGLEC10Q96LC7 697 aa20.62■□□□□ 0.89
MAP1LC3A-202ENST00000374837 WASH6PQ9NQA3 447 aa20.62■□□□□ 0.89
MAP1LC3A-202ENST00000374837 CDC23Q9UJX2 597 aa20.62■□□□□ 0.89
MAP1LC3A-202ENST00000374837 CLCA2Q9UQC9 943 aa20.62■□□□□ 0.89
MAP1LC3A-202ENST00000374837 PRSS21Q9Y6M0 314 aa20.62■□□□□ 0.89
MAP1LC3A-202ENST00000374837 ZZEF1O43149 2961 aa20.62■□□□□ 0.89
MAP1LC3A-202ENST00000374837 MYLKQ15746 1914 aa20.61■□□□□ 0.89
MAP1LC3A-202ENST00000374837 KIR2DS5A0A0G2JLQ3 304 aa20.61■□□□□ 0.89
MAP1LC3A-202ENST00000374837 A0A0G2JNG1 304 aa20.61■□□□□ 0.89
MAP1LC3A-202ENST00000374837 A0A1W2PQM1 296 aa20.61■□□□□ 0.89
MAP1LC3A-202ENST00000374837 MAGEB16A2A368 324 aa20.61■□□□□ 0.89
MAP1LC3A-202ENST00000374837 PDZK1P1A8MUH7 402 aa20.61■□□□□ 0.89
MAP1LC3A-202ENST00000374837 KIR2DS3K7RE56 304 aa20.61■□□□□ 0.89
MAP1LC3A-202ENST00000374837 NTN3O00634 580 aaPredicted RBP20.61■□□□□ 0.89
MAP1LC3A-202ENST00000374837 B4GAT1O43505 415 aa20.61■□□□□ 0.89
MAP1LC3A-202ENST00000374837 URI1O94763 535 aaPredicted RBP20.61■□□□□ 0.89
MAP1LC3A-202ENST00000374837 SLC2A4P14672 509 aa20.61■□□□□ 0.89
MAP1LC3A-202ENST00000374837 ARNTP27540 789 aa20.61■□□□□ 0.89
MAP1LC3A-202ENST00000374837 RPL10P27635 214 aaKnown RBP20.61■□□□□ 0.89
MAP1LC3A-202ENST00000374837 FASLGP48023 281 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms