RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 SUDS3Q9H7L9 328 aaPredicted RBP8.62□□□□□ -1.03
SNRNP40-202ENST00000373720 TLR9Q9NR96 1032 aa8.62□□□□□ -1.03
SNRNP40-202ENST00000373720 SPHK2Q9NRA0 654 aa8.62□□□□□ -1.03
SNRNP40-202ENST00000373720 CACNA2D2Q9NY47 1150 aa8.62□□□□□ -1.03
SNRNP40-202ENST00000373720 NDUFA13Q9P0J0 144 aa8.62□□□□□ -1.03
SNRNP40-202ENST00000373720 TRPS1Q9UHF7 1281 aa8.62□□□□□ -1.03
SNRNP40-202ENST00000373720 FKBPLQ9UIM3 349 aa8.62□□□□□ -1.03
SNRNP40-202ENST00000373720 CRLS1Q9UJA2 301 aa8.62□□□□□ -1.03
SNRNP40-202ENST00000373720 FBXO10Q9UK96 956 aa8.62□□□□□ -1.03
SNRNP40-202ENST00000373720 CROTQ9UKG9 612 aa8.62□□□□□ -1.03
SNRNP40-202ENST00000373720 PCTPQ9UKL6 214 aa8.62□□□□□ -1.03
SNRNP40-202ENST00000373720 SLC27A6Q9Y2P4 619 aa8.62□□□□□ -1.03
SNRNP40-202ENST00000373720 MED16Q9Y2X0 877 aa8.62□□□□□ -1.03
SNRNP40-202ENST00000373720 PLXNA4Q9HCM2 1894 aa8.62□□□□□ -1.03
SNRNP40-202ENST00000373720 NRG2O14511 850 aaPredicted RBP8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 LCE2BO14633 110 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 AIM2O14862 343 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 RGS14O43566 566 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 ECI2O75521 394 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 SLC4A1P02730 911 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 FTH1P02794 183 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 ANXA5P08758 320 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 HIST1H2AGP0C0S8 130 aaPredicted RBP8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 IRF1P10914 325 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 PABPC1P11940 636 aaKnown RBP8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 SRCP12931 536 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 HSD17B1P14061 328 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 HNRNPLP14866 589 aaKnown RBP eCLIP8.61□□□□□ -1.032e-10■■■■□ 25.5
SNRNP40-202ENST00000373720 POLR2EP19388 210 aaKnown RBP8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 HIST1H2ADP20671 130 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 MAPK1P28482 360 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 EEF1DP29692 281 aaKnown RBP8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 HNF1BP35680 557 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 ABCG1P45844 678 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 PNLIPRP1P54315 467 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 KCNK10P57789 538 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 PSME3P61289 254 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 SH3BP2P78314 561 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 DEFB103AP81534 67 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 RHDQ02161 417 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 PCDH1Q08174 1060 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 LRRC74AQ0VAA2 488 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 LMAN2Q12907 356 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 BLMHQ13867 455 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 ARHGEF7Q14155 803 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 SEMA3AQ14563 771 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 ZNF460Q14592 562 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 OR4D1Q15615 310 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 TSNQ15631 228 aaKnown RBP8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 CDKN3Q16667 212 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 ZNF423Q2M1K9 1284 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 GGTA1PQ4G0N0 100 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 ATP6AP1LQ52LC2 224 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 XKR7Q5GH72 579 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 TJAP1Q5JTD0 557 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 GPRC6AQ5T6X5 926 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 IL23RQ5VWK5 629 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 C8orf82Q6P1X6 216 aaPredicted RBP8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 C22orf39Q6P5X5 142 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 ATG14Q6ZNE5 492 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 NUDT18Q6ZVK8 323 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 SERPINA9Q86WD7 417 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 ZBTB2Q8N680 514 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 CELF5Q8N6W0 485 aaKnown RBP8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 PACRGLQ8N7B6 248 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 KLHL23Q8NBE8 558 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 SLC26A7Q8TE54 656 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 STARD8Q92502 1023 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 LINGO1Q96FE5 620 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 PRR11Q96HE9 360 aaPredicted RBP8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 PAWRQ96IZ0 340 aaKnown RBP8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 ZNF514Q96K75 400 aaPredicted RBP8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 HIST1H2AHQ96KK5 128 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 VPS35Q96QK1 796 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 CDRT15Q96T59 188 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 HIST1H2AJQ99878 128 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 TCF25Q9BQ70 676 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 H2AFJQ9BTM1 129 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 ZSCAN5AQ9BUG6 496 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 SLC46A2Q9BY10 475 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 CIPCQ9C0C6 399 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 LMAN2LQ9H0V9 348 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 ZNF334Q9HCZ1 680 aaPredicted RBP8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 IL26Q9NPH9 171 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 MAN1C1Q9NR34 630 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 SMPD4Q9NXE4 827 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 CD274Q9NZQ7 290 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 TMEM181Q9P2C4 612 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 PDP2Q9P2J9 529 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 ABCD2Q9UBJ2 740 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 NKX1-2Q9UD57 310 aaPredicted RBP8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 SCOCQ9UIL1 159 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 LEF1Q9UJU2 399 aaPredicted RBP8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 PTBP2Q9UKA9 531 aaKnown RBP8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 RAB26Q9ULW5 256 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 FAM50BQ9Y247 325 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 TMED5Q9Y3A6 229 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 KCTD3Q9Y597 815 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 AP1M2Q9Y6Q5 423 aa8.61□□□□□ -1.03
SNRNP40-202ENST00000373720 ANAPC1Q9H1A4 1944 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms