RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 ADAMTSL2Q86TH1 951 aa19.34■□□□□ 0.69
HDAC1-201ENST00000373548 TACO1Q9BSH4 297 aaKnown RBP19.34■□□□□ 0.69
HDAC1-201ENST00000373548 AKTIPQ9H8T0 292 aa19.34■□□□□ 0.69
HDAC1-201ENST00000373548 FBRSL1Q9HCM7 1045 aaKnown RBP19.34■□□□□ 0.69
HDAC1-201ENST00000373548 MRGBPQ9NV56 204 aa19.34■□□□□ 0.69
HDAC1-201ENST00000373548 DUS2Q9NX74 493 aaKnown RBP19.34■□□□□ 0.69
HDAC1-201ENST00000373548 C2orf16Q68DN1 1984 aa19.34■□□□□ 0.69
HDAC1-201ENST00000373548 LAMA3Q16787 3333 aa19.34■□□□□ 0.69
HDAC1-201ENST00000373548 CISD3P0C7P0 127 aa19.34■□□□□ 0.69
HDAC1-201ENST00000373548 PRDX3P30048 256 aaKnown RBP19.34■□□□□ 0.69
HDAC1-201ENST00000373548 SPINT3P49223 89 aa19.34■□□□□ 0.69
HDAC1-201ENST00000373548 ERFP50548 548 aa19.34■□□□□ 0.69
HDAC1-201ENST00000373548 CCNG1P51959 295 aa19.34■□□□□ 0.69
HDAC1-201ENST00000373548 POLR2LP62875 67 aaKnown RBP19.34■□□□□ 0.69
HDAC1-201ENST00000373548 PTK2BQ14289 1009 aa19.34■□□□□ 0.69
HDAC1-201ENST00000373548 ZRSR2Q15696 482 aaKnown RBP19.34■□□□□ 0.69
HDAC1-201ENST00000373548 BRAT1Q6PJG6 821 aa19.34■□□□□ 0.69
HDAC1-201ENST00000373548 C16orf89Q6UX73 402 aa19.34■□□□□ 0.69
HDAC1-201ENST00000373548 TMC5Q6UXY8 1006 aa19.34■□□□□ 0.69
HDAC1-201ENST00000373548 SYVN1Q86TM6 617 aa19.34■□□□□ 0.69
HDAC1-201ENST00000373548 ZBTB2Q8N680 514 aa19.34■□□□□ 0.69
HDAC1-201ENST00000373548 HGH1Q9BTY7 390 aa19.34■□□□□ 0.69
HDAC1-201ENST00000373548 MTG2Q9H4K7 406 aa19.34■□□□□ 0.69
HDAC1-201ENST00000373548 ZDHHC3Q9NYG2 299 aa19.34■□□□□ 0.69
HDAC1-201ENST00000373548 ZNF225Q9UK10 706 aa19.34■□□□□ 0.69
HDAC1-201ENST00000373548 E2F3O00716 465 aa19.33■□□□□ 0.69
HDAC1-201ENST00000373548 TBX10O75333 385 aa19.33■□□□□ 0.69
HDAC1-201ENST00000373548 ALDOCP09972 364 aaKnown RBP19.33■□□□□ 0.69
HDAC1-201ENST00000373548 ADH5P11766 374 aa19.33■□□□□ 0.69
HDAC1-201ENST00000373548 VIPR2P41587 438 aa19.33■□□□□ 0.69
HDAC1-201ENST00000373548 RGS4P49798 205 aa19.33■□□□□ 0.69
HDAC1-201ENST00000373548 MTTPP55157 894 aa19.33■□□□□ 0.69
HDAC1-201ENST00000373548 FASTKQ14296 549 aaKnown RBP19.33■□□□□ 0.69
HDAC1-201ENST00000373548 FRA10AC1Q70Z53 315 aa19.33■□□□□ 0.69
HDAC1-201ENST00000373548 C12orf40Q86WS4 652 aa19.33■□□□□ 0.69
HDAC1-201ENST00000373548 MYLK4Q86YV6 388 aaPredicted RBP19.33■□□□□ 0.69
HDAC1-201ENST00000373548 HPS6Q86YV9 775 aa19.33■□□□□ 0.69
HDAC1-201ENST00000373548 FBXW8Q8N3Y1 598 aa19.33■□□□□ 0.69
HDAC1-201ENST00000373548 DTX3LQ8TDB6 740 aa19.33■□□□□ 0.69
HDAC1-201ENST00000373548 PSMD12O00232 456 aaPredicted RBP19.33■□□□□ 0.68
HDAC1-201ENST00000373548 LEFTY1O75610 366 aa19.33■□□□□ 0.68
HDAC1-201ENST00000373548 MLYCDO95822 493 aa19.33■□□□□ 0.68
HDAC1-201ENST00000373548 DGKAP23743 735 aa19.33■□□□□ 0.68
HDAC1-201ENST00000373548 NSG1P42857 185 aa19.33■□□□□ 0.68
HDAC1-201ENST00000373548 PTDSS1P48651 473 aaKnown RBP19.33■□□□□ 0.68
HDAC1-201ENST00000373548 DGKGP49619 791 aa19.33■□□□□ 0.68
HDAC1-201ENST00000373548 ERVK-21P61565 698 aa19.33■□□□□ 0.68
HDAC1-201ENST00000373548 B4GALNT1Q00973 533 aa19.33■□□□□ 0.68
HDAC1-201ENST00000373548 PHYKPLQ8IUZ5 450 aa19.33■□□□□ 0.68
HDAC1-201ENST00000373548 DDIASQ8IXT1 998 aa19.33■□□□□ 0.68
HDAC1-201ENST00000373548 MYO1HQ8N1T3 1032 aa19.33■□□□□ 0.68
HDAC1-201ENST00000373548 OSCP1Q8WVF1 389 aa19.33■□□□□ 0.68
HDAC1-201ENST00000373548 CCDC124Q96CT7 223 aaKnown RBP19.33■□□□□ 0.68
HDAC1-201ENST00000373548 ABCG8Q9H221 673 aa19.33■□□□□ 0.68
HDAC1-201ENST00000373548 EFCAB1Q9HAE3 211 aa19.33■□□□□ 0.68
HDAC1-201ENST00000373548 STX18Q9P2W9 335 aaKnown RBP19.33■□□□□ 0.68
HDAC1-201ENST00000373548 GIMAP2Q9UG22 337 aa19.33■□□□□ 0.68
HDAC1-201ENST00000373548 BTRCQ9Y297 605 aa19.33■□□□□ 0.68
HDAC1-201ENST00000373548 ESRRBO95718 433 aa19.32■□□□□ 0.68
HDAC1-201ENST00000373548 CTSLP07711 333 aa19.32■□□□□ 0.68
HDAC1-201ENST00000373548 NNMTP40261 264 aa19.32■□□□□ 0.68
HDAC1-201ENST00000373548 C18orf21Q32NC0 220 aaPredicted RBP19.32■□□□□ 0.68
HDAC1-201ENST00000373548 AGKQ53H12 422 aa19.32■□□□□ 0.68
HDAC1-201ENST00000373548 ARSIQ5FYB1 569 aa19.32■□□□□ 0.68
HDAC1-201ENST00000373548 ZDHHC20Q5W0Z9 365 aa19.32■□□□□ 0.68
HDAC1-201ENST00000373548 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.32■□□□□ 0.68
HDAC1-201ENST00000373548 OR56A4Q8NGH8 313 aa19.32■□□□□ 0.68
HDAC1-201ENST00000373548 SAMD11Q96NU1 681 aa19.32■□□□□ 0.68
HDAC1-201ENST00000373548 COPS8Q99627 209 aa19.32■□□□□ 0.68
HDAC1-201ENST00000373548 NPAS2Q99743 824 aa19.32■□□□□ 0.68
HDAC1-201ENST00000373548 CERS4Q9HA82 394 aa19.32■□□□□ 0.68
HDAC1-201ENST00000373548 SPATS2LQ9NUQ6 558 aaKnown RBP19.32■□□□□ 0.68
HDAC1-201ENST00000373548 ADAMTS6Q9UKP5 1117 aa19.32■□□□□ 0.68
HDAC1-201ENST00000373548 TMPRSS11EQ9UL52 423 aa19.32■□□□□ 0.68
HDAC1-201ENST00000373548 PRPF19Q9UMS4 504 aaKnown RBP19.32■□□□□ 0.68
HDAC1-201ENST00000373548 POMPQ9Y244 141 aa19.32■□□□□ 0.68
HDAC1-201ENST00000373548 TIMM22Q9Y584 194 aa19.32■□□□□ 0.68
HDAC1-201ENST00000373548 IGLV3-16A0A075B6K0 115 aa19.31■□□□□ 0.68
HDAC1-201ENST00000373548 HOXC11O43248 304 aaPredicted RBP19.31■□□□□ 0.68
HDAC1-201ENST00000373548 ATP4BP51164 291 aa19.31■□□□□ 0.68
HDAC1-201ENST00000373548 SESN3P58005 492 aa19.31■□□□□ 0.68
HDAC1-201ENST00000373548 CCDC6Q16204 474 aa19.31■□□□□ 0.68
HDAC1-201ENST00000373548 RBBP7Q16576 425 aa19.31■□□□□ 0.68
HDAC1-201ENST00000373548 PGAM4Q8N0Y7 254 aa19.31■□□□□ 0.68
HDAC1-201ENST00000373548 SNX31Q8N9S9 440 aa19.31■□□□□ 0.68
HDAC1-201ENST00000373548 LATS2Q9NRM7 1088 aa19.31■□□□□ 0.68
HDAC1-201ENST00000373548 STOML1Q9UBI4 398 aa19.31■□□□□ 0.68
HDAC1-201ENST00000373548 CD84Q9UIB8 345 aa19.31■□□□□ 0.68
HDAC1-201ENST00000373548 TSPAN11A1L157 253 aa19.31■□□□□ 0.68
HDAC1-201ENST00000373548 FFAR2O15552 330 aa19.31■□□□□ 0.68
HDAC1-201ENST00000373548 CRCPO75575 148 aa19.31■□□□□ 0.68
HDAC1-201ENST00000373548 LINC00032P0C843 101 aa19.31■□□□□ 0.68
HDAC1-201ENST00000373548 VIPR1P32241 457 aa19.31■□□□□ 0.68
HDAC1-201ENST00000373548 SLC34A1Q06495 639 aa19.31■□□□□ 0.68
HDAC1-201ENST00000373548 ARHGEF7Q14155 803 aa19.31■□□□□ 0.68
HDAC1-201ENST00000373548 GRB7Q14451 532 aa19.31■□□□□ 0.68
HDAC1-201ENST00000373548 PCBP2Q15366 365 aaKnown RBP eCLIP19.31■□□□□ 0.68
HDAC1-201ENST00000373548 TCHHL1Q5QJ38 904 aaPredicted RBP19.31■□□□□ 0.68
HDAC1-201ENST00000373548 PDPRQ8NCN5 879 aa19.31■□□□□ 0.68
HDAC1-201ENST00000373548 NUSAP1Q9BXS6 441 aaKnown RBP19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms