RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 PCDH15Q96QU1 1955 aa20.32■□□□□ 0.84
SYNC-201ENST00000373484 RNF220Q5VTB9 566 aa20.32■□□□□ 0.84
SYNC-201ENST00000373484 ITPRIPL1Q6GPH6 555 aa20.32■□□□□ 0.84
SYNC-201ENST00000373484 RABEPKQ7Z6M1 372 aa20.32■□□□□ 0.84
SYNC-201ENST00000373484 CAND1Q86VP6 1230 aaKnown RBP20.32■□□□□ 0.84
SYNC-201ENST00000373484 CTAGE3PQ8IX95 158 aa20.32■□□□□ 0.84
SYNC-201ENST00000373484 CXorf40AQ8TE69 158 aa20.32■□□□□ 0.84
SYNC-201ENST00000373484 CENPKQ9BS16 269 aa20.32■□□□□ 0.84
SYNC-201ENST00000373484 VPS45Q9NRW7 570 aa20.32■□□□□ 0.84
SYNC-201ENST00000373484 DMTF1Q9Y222 760 aa20.32■□□□□ 0.84
SYNC-201ENST00000373484 ZNF292O60281 2723 aa20.31■□□□□ 0.84
SYNC-201ENST00000373484 OPHN1O60890 802 aa20.31■□□□□ 0.84
SYNC-201ENST00000373484 GNSP15586 552 aa20.31■□□□□ 0.84
SYNC-201ENST00000373484 TGM1P22735 817 aa20.31■□□□□ 0.84
SYNC-201ENST00000373484 NFKBIAP25963 317 aa20.31■□□□□ 0.84
SYNC-201ENST00000373484 CPOXP36551 454 aa20.31■□□□□ 0.84
SYNC-201ENST00000373484 AQP5P55064 265 aa20.31■□□□□ 0.84
SYNC-201ENST00000373484 BTKQ06187 659 aa20.31■□□□□ 0.84
SYNC-201ENST00000373484 RALGDSQ12967 914 aa20.31■□□□□ 0.84
SYNC-201ENST00000373484 PDCD2Q16342 344 aaPredicted RBP20.31■□□□□ 0.84
SYNC-201ENST00000373484 C1orf146Q5VVC0 180 aa20.31■□□□□ 0.84
SYNC-201ENST00000373484 DPPA4Q7L190 304 aa20.31■□□□□ 0.84
SYNC-201ENST00000373484 CEP76Q8TAP6 659 aa20.31■□□□□ 0.84
SYNC-201ENST00000373484 KLK6Q92876 244 aa20.31■□□□□ 0.84
SYNC-201ENST00000373484 SCRN2Q96FV2 425 aa20.31■□□□□ 0.84
SYNC-201ENST00000373484 CFAP36Q96G28 342 aa20.31■□□□□ 0.84
SYNC-201ENST00000373484 MCCC1Q96RQ3 725 aaPredicted RBP20.31■□□□□ 0.84
SYNC-201ENST00000373484 TRIB3Q96RU7 358 aa20.31■□□□□ 0.84
SYNC-201ENST00000373484 WRAP53Q9BUR4 548 aaKnown RBP20.31■□□□□ 0.84
SYNC-201ENST00000373484 SLC17A9Q9BYT1 436 aa20.31■□□□□ 0.84
SYNC-201ENST00000373484 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.31■□□□□ 0.84
SYNC-201ENST00000373484 A0A1B0GTW7 788 aa20.3■□□□□ 0.84
SYNC-201ENST00000373484 IGLON5A6NGN9 336 aa20.3■□□□□ 0.84
SYNC-201ENST00000373484 BCAT2O15382 392 aaPredicted RBP20.3■□□□□ 0.84
SYNC-201ENST00000373484 GCATO75600 419 aa20.3■□□□□ 0.84
SYNC-201ENST00000373484 ZNF806P0C7X5 589 aa20.3■□□□□ 0.84
SYNC-201ENST00000373484 SEMG2Q02383 582 aa20.3■□□□□ 0.84
SYNC-201ENST00000373484 FGL2Q14314 439 aa20.3■□□□□ 0.84
SYNC-201ENST00000373484 DUOXA1Q1HG43 343 aa20.3■□□□□ 0.84
SYNC-201ENST00000373484 IZUMO2Q6UXV1 221 aa20.3■□□□□ 0.84
SYNC-201ENST00000373484 EBNA1BP2Q99848 306 aaKnown RBP20.3■□□□□ 0.84
SYNC-201ENST00000373484 GORASP1Q9BQQ3 440 aa20.3■□□□□ 0.84
SYNC-201ENST00000373484 C1QTNF2Q9BXJ5 285 aa20.3■□□□□ 0.84
SYNC-201ENST00000373484 SMOC1Q9H4F8 434 aa20.3■□□□□ 0.84
SYNC-201ENST00000373484 TM9SF3Q9HD45 589 aa20.3■□□□□ 0.84
SYNC-201ENST00000373484 VCX3AQ9NNX9 186 aa20.3■□□□□ 0.84
SYNC-201ENST00000373484 PARD6AQ9NPB6 346 aa20.3■□□□□ 0.84
SYNC-201ENST00000373484 SEMA4GQ9NTN9 838 aa20.3■□□□□ 0.84
SYNC-201ENST00000373484 UBP1Q9NZI7 540 aa20.3■□□□□ 0.84
SYNC-201ENST00000373484 NDUFA13Q9P0J0 144 aa20.3■□□□□ 0.84
SYNC-201ENST00000373484 B4GALT6Q9UBX8 382 aa20.3■□□□□ 0.84
SYNC-201ENST00000373484 A0A0J9YYE9 177 aa20.3■□□□□ 0.84
SYNC-201ENST00000373484 EIF4E1BA6NMX2 242 aaKnown RBP20.3■□□□□ 0.84
SYNC-201ENST00000373484 PATE3B3GLJ2 98 aa20.3■□□□□ 0.84
SYNC-201ENST00000373484 F5H423 210 aaPredicted RBP20.3■□□□□ 0.84
SYNC-201ENST00000373484 MMP20O60882 483 aa20.3■□□□□ 0.84
SYNC-201ENST00000373484 PIAS1O75925 651 aa20.3■□□□□ 0.84
SYNC-201ENST00000373484 TRBC1P01850 177 aa20.3■□□□□ 0.84
SYNC-201ENST00000373484 GRK2P25098 689 aa20.3■□□□□ 0.84
SYNC-201ENST00000373484 PRDX6P30041 224 aa20.3■□□□□ 0.84
SYNC-201ENST00000373484 GRIA4P48058 902 aa20.3■□□□□ 0.84
SYNC-201ENST00000373484 EPHB1P54762 984 aa20.3■□□□□ 0.84
SYNC-201ENST00000373484 CSRP2Q16527 193 aa20.3■□□□□ 0.84
SYNC-201ENST00000373484 PCSK7Q16549 785 aa20.3■□□□□ 0.84
SYNC-201ENST00000373484 FOXB2Q5VYV0 432 aa20.3■□□□□ 0.84
SYNC-201ENST00000373484 SLC23A3Q6PIS1 610 aa20.3■□□□□ 0.84
SYNC-201ENST00000373484 KDELC1Q6UW63 502 aa20.3■□□□□ 0.84
SYNC-201ENST00000373484 NDUFAF2Q8N183 169 aa20.3■□□□□ 0.84
SYNC-201ENST00000373484 LPCAT1Q8NF37 534 aa20.3■□□□□ 0.84
SYNC-201ENST00000373484 ASB12Q8WXK4 309 aa20.3■□□□□ 0.84
SYNC-201ENST00000373484 THTPAQ9BU02 230 aa20.3■□□□□ 0.84
SYNC-201ENST00000373484 ADGRE3Q9BY15 652 aa20.3■□□□□ 0.84
SYNC-201ENST00000373484 PLAC1Q9HBJ0 212 aa20.3■□□□□ 0.84
SYNC-201ENST00000373484 S100A14Q9HCY8 104 aa20.3■□□□□ 0.84
SYNC-201ENST00000373484 TMEM131Q92545 1883 aa20.29■□□□□ 0.84
SYNC-201ENST00000373484 PRR5-ARHGAP8B1AHC4 643 aa20.29■□□□□ 0.84
SYNC-201ENST00000373484 BUD23O43709 281 aaKnown RBP20.29■□□□□ 0.84
SYNC-201ENST00000373484 PEX1O43933 1283 aa20.29■□□□□ 0.84
SYNC-201ENST00000373484 PMPCBO75439 489 aa20.29■□□□□ 0.84
SYNC-201ENST00000373484 CYP2A6P11509 494 aaPredicted RBP20.29■□□□□ 0.84
SYNC-201ENST00000373484 ALOX15P16050 662 aaPredicted RBP20.29■□□□□ 0.84
SYNC-201ENST00000373484 CTPS1P17812 591 aa20.29■□□□□ 0.84
SYNC-201ENST00000373484 PSMB4P28070 264 aa20.29■□□□□ 0.84
SYNC-201ENST00000373484 VIPR1P32241 457 aa20.29■□□□□ 0.84
SYNC-201ENST00000373484 RACK1P63244 317 aaKnown RBP20.29■□□□□ 0.84
SYNC-201ENST00000373484 CDC16Q13042 620 aa20.29■□□□□ 0.84
SYNC-201ENST00000373484 MPP3Q13368 585 aa20.29■□□□□ 0.84
SYNC-201ENST00000373484 INSCQ1MX18 579 aa20.29■□□□□ 0.84
SYNC-201ENST00000373484 TRIM61Q5EBN2 209 aa20.29■□□□□ 0.84
SYNC-201ENST00000373484 STEAP4Q687X5 459 aa20.29■□□□□ 0.84
SYNC-201ENST00000373484 NAPEPLDQ6IQ20 393 aa20.29■□□□□ 0.84
SYNC-201ENST00000373484 LIPIQ6XZB0 460 aa20.29■□□□□ 0.84
SYNC-201ENST00000373484 USP45Q70EL2 814 aa20.29■□□□□ 0.84
SYNC-201ENST00000373484 CCNJLQ8IV13 435 aa20.29■□□□□ 0.84
SYNC-201ENST00000373484 ST13P4Q8IZP2 240 aaPredicted RBP20.29■□□□□ 0.84
SYNC-201ENST00000373484 PIWIL2Q8TC59 973 aaKnown RBP20.29■□□□□ 0.84
SYNC-201ENST00000373484 SLC6A18Q96N87 628 aa20.29■□□□□ 0.84
SYNC-201ENST00000373484 EPB41L1Q9H4G0 881 aa20.29■□□□□ 0.84
SYNC-201ENST00000373484 A0A088AWK7 358 aa20.28■□□□□ 0.84
SYNC-201ENST00000373484 NPIPB15A6NHN6 443 aaPredicted RBP20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms