RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 SIKE1Q9BRV8 207 aa25.96■■□□□ 1.75
ATPAF1-202ENST00000371937 SLC2A4RGQ9NR83 387 aa25.96■■□□□ 1.75
ATPAF1-202ENST00000371937 DCTN4Q9UJW0 460 aa25.96■■□□□ 1.75
ATPAF1-202ENST00000371937 NEMP2A6NFY4 417 aa25.95■■□□□ 1.75
ATPAF1-202ENST00000371937 NARSO43776 548 aaKnown RBP25.95■■□□□ 1.75
ATPAF1-202ENST00000371937 NPHS1O60500 1241 aa25.95■■□□□ 1.75
ATPAF1-202ENST00000371937 SRFP11831 508 aa25.95■■□□□ 1.75
ATPAF1-202ENST00000371937 TDGQ13569 410 aa25.95■■□□□ 1.75
ATPAF1-202ENST00000371937 TSNQ15631 228 aaKnown RBP25.95■■□□□ 1.75
ATPAF1-202ENST00000371937 TRIM67Q6ZTA4 783 aa25.95■■□□□ 1.75
ATPAF1-202ENST00000371937 CCNYL1Q8N7R7 359 aa25.95■■□□□ 1.75
ATPAF1-202ENST00000371937 NAT14Q8WUY8 206 aa25.95■■□□□ 1.75
ATPAF1-202ENST00000371937 DNAJC16Q9Y2G8 782 aa25.95■■□□□ 1.75
ATPAF1-202ENST00000371937 DNTTP04053 509 aa25.95■■□□□ 1.74
ATPAF1-202ENST00000371937 HSF5Q4G112 596 aaPredicted RBP25.95■■□□□ 1.74
ATPAF1-202ENST00000371937 PTCRAQ6ISU1 281 aaPredicted RBP25.95■■□□□ 1.74
ATPAF1-202ENST00000371937 PHYKPLQ8IUZ5 450 aa25.95■■□□□ 1.74
ATPAF1-202ENST00000371937 RFWD2Q8NHY2 731 aa25.95■■□□□ 1.74
ATPAF1-202ENST00000371937 FAM3CQ92520 227 aa25.95■■□□□ 1.74
ATPAF1-202ENST00000371937 CNDP1Q96KN2 507 aa25.95■■□□□ 1.74
ATPAF1-202ENST00000371937 MKRN2Q9H000 416 aaKnown RBP25.95■■□□□ 1.74
ATPAF1-202ENST00000371937 A0A0G2JND7 137 aa25.94■■□□□ 1.74
ATPAF1-202ENST00000371937 A0A1W2PP55 124 aa25.94■■□□□ 1.74
ATPAF1-202ENST00000371937 A0A1W2PQF6 199 aa25.94■■□□□ 1.74
ATPAF1-202ENST00000371937 CDC7O00311 574 aa25.94■■□□□ 1.74
ATPAF1-202ENST00000371937 KPNA5O15131 536 aa25.94■■□□□ 1.74
ATPAF1-202ENST00000371937 RNASEH2AO75792 299 aaKnown RBP25.94■■□□□ 1.74
ATPAF1-202ENST00000371937 CBSLP0DN79 551 aa25.94■■□□□ 1.74
ATPAF1-202ENST00000371937 IMPDH1P20839 514 aa25.94■■□□□ 1.74
ATPAF1-202ENST00000371937 ARRB2P32121 409 aa25.94■■□□□ 1.74
ATPAF1-202ENST00000371937 CBSP35520 551 aa25.94■■□□□ 1.74
ATPAF1-202ENST00000371937 ARFIP2P53365 341 aa25.94■■□□□ 1.74
ATPAF1-202ENST00000371937 SLC44A4Q53GD3 710 aa25.94■■□□□ 1.74
ATPAF1-202ENST00000371937 RAB44Q7Z6P3 723 aaPredicted RBP25.94■■□□□ 1.74
ATPAF1-202ENST00000371937 TMPRSS6Q8IU80 811 aa25.94■■□□□ 1.74
ATPAF1-202ENST00000371937 MYO1HQ8N1T3 1032 aa25.94■■□□□ 1.74
ATPAF1-202ENST00000371937 FUBP1Q96AE4 644 aaKnown RBP25.94■■□□□ 1.74
ATPAF1-202ENST00000371937 PHF21BQ96EK2 531 aa25.94■■□□□ 1.74
ATPAF1-202ENST00000371937 ILKAPQ9H0C8 392 aaPredicted RBP25.94■■□□□ 1.74
ATPAF1-202ENST00000371937 CYP4F12Q9HCS2 524 aa25.94■■□□□ 1.74
ATPAF1-202ENST00000371937 KCNK4Q9NYG8 393 aa25.94■■□□□ 1.74
ATPAF1-202ENST00000371937 SCML1Q9UN30 329 aa25.94■■□□□ 1.74
ATPAF1-202ENST00000371937 KITP10721 976 aa25.93■■□□□ 1.74
ATPAF1-202ENST00000371937 GPR1P46091 355 aa25.93■■□□□ 1.74
ATPAF1-202ENST00000371937 TAS2R38P59533 333 aa25.93■■□□□ 1.74
ATPAF1-202ENST00000371937 IER5LQ5T953 404 aa25.93■■□□□ 1.74
ATPAF1-202ENST00000371937 DET1Q7L5Y6 550 aa25.93■■□□□ 1.74
ATPAF1-202ENST00000371937 EXT2Q93063 718 aa25.93■■□□□ 1.74
ATPAF1-202ENST00000371937 MARCOQ9UEW3 520 aaPredicted RBP25.93■■□□□ 1.74
ATPAF1-202ENST00000371937 TMCO1Q9UM00 188 aa25.93■■□□□ 1.74
ATPAF1-202ENST00000371937 NPEPPSL1A6NEC2 478 aa25.93■■□□□ 1.74
ATPAF1-202ENST00000371937 EIF3FO00303 357 aaPredicted RBP25.93■■□□□ 1.74
ATPAF1-202ENST00000371937 MTX2O75431 263 aa25.93■■□□□ 1.74
ATPAF1-202ENST00000371937 PCDH8O95206 1070 aa25.93■■□□□ 1.74
ATPAF1-202ENST00000371937 MTHFD2P13995 350 aa25.93■■□□□ 1.74
ATPAF1-202ENST00000371937 PUS10Q3MIT2 529 aaKnown RBP25.93■■□□□ 1.74
ATPAF1-202ENST00000371937 PRPF38BQ5VTL8 546 aaKnown RBP25.93■■□□□ 1.74
ATPAF1-202ENST00000371937 RAET1GQ6H3X3 334 aa25.93■■□□□ 1.74
ATPAF1-202ENST00000371937 ADAMTSL2Q86TH1 951 aa25.93■■□□□ 1.74
ATPAF1-202ENST00000371937 GANCQ8TET4 914 aa25.93■■□□□ 1.74
ATPAF1-202ENST00000371937 L3HYPDHQ96EM0 354 aa25.93■■□□□ 1.74
ATPAF1-202ENST00000371937 TMEM237Q96Q45 408 aa25.93■■□□□ 1.74
ATPAF1-202ENST00000371937 KCNK13Q9HB14 408 aa25.93■■□□□ 1.74
ATPAF1-202ENST00000371937 FBXL12Q9NXK8 326 aa25.93■■□□□ 1.74
ATPAF1-202ENST00000371937 RAP2CQ9Y3L5 183 aa25.93■■□□□ 1.74
ATPAF1-202ENST00000371937 MYO10Q9HD67 2058 aa25.92■■□□□ 1.74
ATPAF1-202ENST00000371937 PIKFYVEQ9Y2I7 2098 aa25.92■■□□□ 1.74
ATPAF1-202ENST00000371937 CCT8L1PA6NM43 557 aa25.92■■□□□ 1.74
ATPAF1-202ENST00000371937 SUPT3HB4E1H0 165 aa25.92■■□□□ 1.74
ATPAF1-202ENST00000371937 UBXN8O00124 270 aa25.92■■□□□ 1.74
ATPAF1-202ENST00000371937 SUPT3HO75486 399 aa25.92■■□□□ 1.74
ATPAF1-202ENST00000371937 TM7SF2O76062 418 aa25.92■■□□□ 1.74
ATPAF1-202ENST00000371937 FTH1P02794 183 aa25.92■■□□□ 1.74
ATPAF1-202ENST00000371937 GFAPP14136 432 aa25.92■■□□□ 1.74
ATPAF1-202ENST00000371937 ZBTB16Q05516 673 aa25.92■■□□□ 1.74
ATPAF1-202ENST00000371937 ARL13AQ5H913 290 aaPredicted RBP25.92■■□□□ 1.74
ATPAF1-202ENST00000371937 EOGTQ5NDL2 527 aa25.92■■□□□ 1.74
ATPAF1-202ENST00000371937 TRPM8Q7Z2W7 1104 aa25.92■■□□□ 1.74
ATPAF1-202ENST00000371937 GPSM1Q86YR5 675 aa25.92■■□□□ 1.74
ATPAF1-202ENST00000371937 GUCD1Q96NT3 240 aa25.92■■□□□ 1.74
ATPAF1-202ENST00000371937 ZCCHC2Q9C0B9 1178 aaKnown RBP25.92■■□□□ 1.74
ATPAF1-202ENST00000371937 SERGEFQ9UGK8 458 aa25.92■■□□□ 1.74
ATPAF1-202ENST00000371937 IKZF3Q9UKT9 509 aa25.92■■□□□ 1.74
ATPAF1-202ENST00000371937 LRRK1Q38SD2 2015 aa25.92■■□□□ 1.74
ATPAF1-202ENST00000371937 ATG2BQ96BY7 2078 aa25.92■■□□□ 1.74
ATPAF1-202ENST00000371937 SOD1P00441 154 aa25.91■■□□□ 1.74
ATPAF1-202ENST00000371937 ENO3P13929 434 aaPredicted RBP25.91■■□□□ 1.74
ATPAF1-202ENST00000371937 AOAHP28039 575 aa25.91■■□□□ 1.74
ATPAF1-202ENST00000371937 HNRNPH2P55795 449 aaKnown RBP25.91■■□□□ 1.74
ATPAF1-202ENST00000371937 HERVK_113P63132 956 aa25.91■■□□□ 1.74
ATPAF1-202ENST00000371937 TMEM115Q12893 351 aaPredicted RBP25.91■■□□□ 1.74
ATPAF1-202ENST00000371937 PRKAA1Q13131 559 aa25.91■■□□□ 1.74
ATPAF1-202ENST00000371937 CCINQ13939 588 aa25.91■■□□□ 1.74
ATPAF1-202ENST00000371937 KHDC1Q4VXA5 237 aaKnown RBP25.91■■□□□ 1.74
ATPAF1-202ENST00000371937 ACSBG2Q5FVE4 666 aa25.91■■□□□ 1.74
ATPAF1-202ENST00000371937 ATG14Q6ZNE5 492 aa25.91■■□□□ 1.74
ATPAF1-202ENST00000371937 YTHDF3Q7Z739 585 aaKnown RBP25.91■■□□□ 1.74
ATPAF1-202ENST00000371937 FAM131CQ96AQ9 280 aa25.91■■□□□ 1.74
ATPAF1-202ENST00000371937 RMDN2Q96LZ7 410 aa25.91■■□□□ 1.74
ATPAF1-202ENST00000371937 TMEM120AQ9BXJ8 343 aa25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms