RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 C1orf186Q6ZWK4 172 aa12.36□□□□□ -0.43
HCFC1-202ENST00000369984 SATL1Q86VE3 508 aa12.36□□□□□ -0.43
HCFC1-202ENST00000369984 TMEM192Q8IY95 271 aa12.36□□□□□ -0.43
HCFC1-202ENST00000369984 UBE2J2Q8N2K1 259 aa12.36□□□□□ -0.43
HCFC1-202ENST00000369984 TWIST2Q8WVJ9 160 aa12.36□□□□□ -0.43
HCFC1-202ENST00000369984 KLHL5Q96PQ7 755 aa12.36□□□□□ -0.43
HCFC1-202ENST00000369984 DNAJC28Q9NX36 388 aa12.36□□□□□ -0.43
HCFC1-202ENST00000369984 CACNB4O00305 520 aaPredicted RBP12.35□□□□□ -0.43
HCFC1-202ENST00000369984 CNTN2Q02246 1040 aa12.35□□□□□ -0.43
HCFC1-202ENST00000369984 RHBDF2Q6PJF5 856 aa12.35□□□□□ -0.43
HCFC1-202ENST00000369984 ZYG11AQ6WRX3 759 aa12.35□□□□□ -0.43
HCFC1-202ENST00000369984 LINGO2Q7L985 606 aa12.35□□□□□ -0.43
HCFC1-202ENST00000369984 AMIGO1Q86WK6 493 aa12.35□□□□□ -0.43
HCFC1-202ENST00000369984 CFAP52Q8N1V2 620 aa12.35□□□□□ -0.43
HCFC1-202ENST00000369984 C2orf73Q8N5S3 287 aaPredicted RBP12.35□□□□□ -0.43
HCFC1-202ENST00000369984 ADAMTS15Q8TE58 950 aa12.35□□□□□ -0.43
HCFC1-202ENST00000369984 NXNL1Q96CM4 212 aa12.35□□□□□ -0.43
HCFC1-202ENST00000369984 MRPL45Q9BRJ2 306 aaKnown RBP12.35□□□□□ -0.43
HCFC1-202ENST00000369984 RHOJQ9H4E5 214 aa12.35□□□□□ -0.43
HCFC1-202ENST00000369984 HIF3AQ9Y2N7 669 aa12.35□□□□□ -0.43
HCFC1-202ENST00000369984 TPST2O60704 377 aa12.35□□□□□ -0.43
HCFC1-202ENST00000369984 C22orf31O95567 290 aa12.35□□□□□ -0.43
HCFC1-202ENST00000369984 CDH13P55290 713 aa12.35□□□□□ -0.43
HCFC1-202ENST00000369984 DDR1Q08345 913 aa12.35□□□□□ -0.43
HCFC1-202ENST00000369984 POTEHQ6S545 545 aa12.35□□□□□ -0.43
HCFC1-202ENST00000369984 SMARCD3Q6STE5 483 aa12.35□□□□□ -0.43
HCFC1-202ENST00000369984 SLC27A5Q9Y2P5 690 aa12.35□□□□□ -0.43
HCFC1-202ENST00000369984 TRAFD1O14545 582 aaPredicted RBP12.35□□□□□ -0.43
HCFC1-202ENST00000369984 DDX6P26196 483 aaKnown RBP eCLIP12.35□□□□□ -0.435e-7■■■■■ 30
HCFC1-202ENST00000369984 MC1RQ01726 317 aa12.35□□□□□ -0.43
HCFC1-202ENST00000369984 HSFY1Q96LI6 401 aa12.35□□□□□ -0.43
HCFC1-202ENST00000369984 TBC1D17Q9HA65 648 aa12.35□□□□□ -0.43
HCFC1-202ENST00000369984 TMEM27Q9HBJ8 222 aa12.35□□□□□ -0.43
HCFC1-202ENST00000369984 GRHL1Q9NZI5 618 aa12.35□□□□□ -0.43
HCFC1-202ENST00000369984 CARNS1A5YM72 827 aa12.35□□□□□ -0.43
HCFC1-202ENST00000369984 GNAO1P09471 354 aa12.35□□□□□ -0.43
HCFC1-202ENST00000369984 BEX3Q00994 111 aa12.35□□□□□ -0.43
HCFC1-202ENST00000369984 CAPN13Q6MZZ7 669 aaPredicted RBP12.35□□□□□ -0.43
HCFC1-202ENST00000369984 ZNF366Q8N895 744 aa12.35□□□□□ -0.43
HCFC1-202ENST00000369984 PWWP2AQ96N64 755 aa12.35□□□□□ -0.43
HCFC1-202ENST00000369984 ACO2Q99798 780 aaKnown RBP12.35□□□□□ -0.43
HCFC1-202ENST00000369984 TRMOQ9BU70 441 aa12.35□□□□□ -0.43
HCFC1-202ENST00000369984 EDARQ9UNE0 448 aa12.35□□□□□ -0.43
HCFC1-202ENST00000369984 ANXA2P2A6NMY6 339 aa12.35□□□□□ -0.43
HCFC1-202ENST00000369984 REM1O75628 298 aa12.35□□□□□ -0.43
HCFC1-202ENST00000369984 TM7SF2O76062 418 aa12.35□□□□□ -0.43
HCFC1-202ENST00000369984 IPO13O94829 963 aaKnown RBP12.35□□□□□ -0.43
HCFC1-202ENST00000369984 CLDN9O95484 217 aa12.35□□□□□ -0.43
HCFC1-202ENST00000369984 CYP17A1P05093 508 aa12.35□□□□□ -0.43
HCFC1-202ENST00000369984 ANXA2P07355 339 aaKnown RBP12.35□□□□□ -0.43
HCFC1-202ENST00000369984 NR4A1P22736 598 aa12.35□□□□□ -0.43
HCFC1-202ENST00000369984 ZNF662Q6ZS27 426 aa12.35□□□□□ -0.43
HCFC1-202ENST00000369984 P2RY8Q86VZ1 359 aa12.35□□□□□ -0.43
HCFC1-202ENST00000369984 ZZZ3Q8IYH5 903 aa12.35□□□□□ -0.43
HCFC1-202ENST00000369984 ZNF567Q8N184 647 aa12.35□□□□□ -0.43
HCFC1-202ENST00000369984 HDDC3Q8N4P3 179 aa12.35□□□□□ -0.43
HCFC1-202ENST00000369984 CEP170BQ9Y4F5 1589 aaPredicted RBP12.35□□□□□ -0.43
HCFC1-202ENST00000369984 FAM155BO75949 473 aa12.35□□□□□ -0.43
HCFC1-202ENST00000369984 CABYRO75952 493 aa12.35□□□□□ -0.43
HCFC1-202ENST00000369984 ADCYAP1R1P41586 468 aa12.35□□□□□ -0.43
HCFC1-202ENST00000369984 CSTF1Q05048 431 aaKnown RBP12.35□□□□□ -0.43
HCFC1-202ENST00000369984 FAM46CQ5VWP2 391 aa12.35□□□□□ -0.43
HCFC1-202ENST00000369984 PHF13Q86YI8 300 aaPredicted RBP12.35□□□□□ -0.43
HCFC1-202ENST00000369984 ASTN1O14525 1302 aa12.35□□□□□ -0.43
HCFC1-202ENST00000369984 DNAJA2O60884 412 aa12.35□□□□□ -0.43
HCFC1-202ENST00000369984 UROSP10746 265 aa12.35□□□□□ -0.43
HCFC1-202ENST00000369984 AZGP1P25311 298 aaKnown RBP12.35□□□□□ -0.43
HCFC1-202ENST00000369984 CD40LGP29965 261 aa12.35□□□□□ -0.43
HCFC1-202ENST00000369984 KIR3DL1P43629 444 aa12.35□□□□□ -0.43
HCFC1-202ENST00000369984 VPS26BQ4G0F5 336 aa12.35□□□□□ -0.43
HCFC1-202ENST00000369984 CLNKQ7Z7G1 428 aa12.35□□□□□ -0.43
HCFC1-202ENST00000369984 TRABD2AQ86V40 505 aa12.35□□□□□ -0.43
HCFC1-202ENST00000369984 ARHGEF28Q8N1W1 1705 aaKnown RBP12.35□□□□□ -0.43
HCFC1-202ENST00000369984 GTPBP3Q969Y2 492 aaKnown RBP12.35□□□□□ -0.43
HCFC1-202ENST00000369984 MAN2B2Q9Y2E5 1009 aa12.35□□□□□ -0.43
HCFC1-202ENST00000369984 PDE4DIPQ5VU43 2346 aa12.34□□□□□ -0.43
HCFC1-202ENST00000369984 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.34□□□□□ -0.43
HCFC1-202ENST00000369984 KCNU1A8MYU2 1149 aa12.34□□□□□ -0.43
HCFC1-202ENST00000369984 ICAM3P32942 547 aa12.34□□□□□ -0.43
HCFC1-202ENST00000369984 SHMT1P34896 483 aa12.34□□□□□ -0.43
HCFC1-202ENST00000369984 RGS19P49795 217 aa12.34□□□□□ -0.43
HCFC1-202ENST00000369984 SIM2Q14190 667 aaPredicted RBP12.34□□□□□ -0.43
HCFC1-202ENST00000369984 KCTD19Q17RG1 926 aaPredicted RBP12.34□□□□□ -0.43
HCFC1-202ENST00000369984 XAGE5Q8WWM1 108 aa12.34□□□□□ -0.43
HCFC1-202ENST00000369984 NODALQ96S42 347 aa12.34□□□□□ -0.43
HCFC1-202ENST00000369984 MED31Q9Y3C7 131 aa12.34□□□□□ -0.43
HCFC1-202ENST00000369984 MYH14Q7Z406 1995 aaKnown RBP12.34□□□□□ -0.43
HCFC1-202ENST00000369984 BHMG1C9JSJ3 638 aaPredicted RBP12.34□□□□□ -0.43
HCFC1-202ENST00000369984 GNPDA1P46926 289 aa12.34□□□□□ -0.43
HCFC1-202ENST00000369984 SCNN1GP51170 649 aa12.34□□□□□ -0.43
HCFC1-202ENST00000369984 FMO1Q01740 532 aa12.34□□□□□ -0.43
HCFC1-202ENST00000369984 C2orf80Q0P641 193 aa12.34□□□□□ -0.43
HCFC1-202ENST00000369984 KCTD8Q6ZWB6 473 aa12.34□□□□□ -0.43
HCFC1-202ENST00000369984 USP43Q70EL4 1123 aa12.34□□□□□ -0.43
HCFC1-202ENST00000369984 RBM15BQ8NDT2 890 aaKnown RBP12.34□□□□□ -0.43
HCFC1-202ENST00000369984 HEXDCQ8WVB3 486 aa12.34□□□□□ -0.43
HCFC1-202ENST00000369984 ACSS2Q9NR19 701 aa12.34□□□□□ -0.43
HCFC1-202ENST00000369984 LGALS2P05162 132 aa12.34□□□□□ -0.43
HCFC1-202ENST00000369984 ADRB2P07550 413 aa12.34□□□□□ -0.43
HCFC1-202ENST00000369984 CCR3P51677 355 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms