RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 CMPK2Q5EBM0 449 aa15.78■□□□□ 0.12
COL17A1-202ENST00000369733 HECTD3Q5T447 861 aa15.78■□□□□ 0.12
COL17A1-202ENST00000369733 NCBP2-AS2Q69YL0 99 aa15.78■□□□□ 0.12
COL17A1-202ENST00000369733 CENPSQ8N2Z9 138 aa15.78■□□□□ 0.12
COL17A1-202ENST00000369733 SLC13A3Q8WWT9 602 aa15.78■□□□□ 0.12
COL17A1-202ENST00000369733 MIPEPQ99797 713 aa15.78■□□□□ 0.12
COL17A1-202ENST00000369733 TCF25Q9BQ70 676 aa15.78■□□□□ 0.12
COL17A1-202ENST00000369733 MARCH7Q9H992 704 aa15.78■□□□□ 0.12
COL17A1-202ENST00000369733 GBA2Q9HCG7 927 aaPredicted RBP15.78■□□□□ 0.12
COL17A1-202ENST00000369733 PRDM8Q9NQV8 689 aa15.78■□□□□ 0.12
COL17A1-202ENST00000369733 MTRRQ9UBK8 725 aa15.78■□□□□ 0.12
COL17A1-202ENST00000369733 ZNF232Q9UNY5 417 aa15.78■□□□□ 0.12
COL17A1-202ENST00000369733 A0A1W2PPW3 197 aa15.77■□□□□ 0.12
COL17A1-202ENST00000369733 A0A1W2PQH9 124 aa15.77■□□□□ 0.12
COL17A1-202ENST00000369733 PGRMC2O15173 223 aa15.77■□□□□ 0.12
COL17A1-202ENST00000369733 GUCY1B2O75343 617 aa15.77■□□□□ 0.12
COL17A1-202ENST00000369733 CELF2O95319 508 aaKnown RBP15.77■□□□□ 0.12
COL17A1-202ENST00000369733 TIE1P35590 1138 aa15.77■□□□□ 0.12
COL17A1-202ENST00000369733 PHC1P78364 1004 aa15.77■□□□□ 0.12
COL17A1-202ENST00000369733 GNA13Q14344 377 aa15.77■□□□□ 0.12
COL17A1-202ENST00000369733 FAM20CQ8IXL6 584 aa15.77■□□□□ 0.12
COL17A1-202ENST00000369733 SCAMP3O14828 347 aaKnown RBP15.77■□□□□ 0.12
COL17A1-202ENST00000369733 NDST3O95803 873 aa15.77■□□□□ 0.12
COL17A1-202ENST00000369733 PABPC4LP0CB38 370 aaKnown RBP15.77■□□□□ 0.12
COL17A1-202ENST00000369733 ITPKAP23677 461 aa15.77■□□□□ 0.12
COL17A1-202ENST00000369733 HERVK_113P63132 956 aa15.77■□□□□ 0.12
COL17A1-202ENST00000369733 TPGS1Q6ZTW0 290 aa15.77■□□□□ 0.12
COL17A1-202ENST00000369733 MON1AQ86VX9 555 aa15.77■□□□□ 0.12
COL17A1-202ENST00000369733 ANKRD46Q86W74 232 aa15.77■□□□□ 0.12
COL17A1-202ENST00000369733 PCSK9Q8NBP7 692 aaKnown RBP15.77■□□□□ 0.12
COL17A1-202ENST00000369733 PLEKHO2Q8TD55 490 aa15.77■□□□□ 0.12
COL17A1-202ENST00000369733 DDX1Q92499 740 aaKnown RBP15.77■□□□□ 0.12
COL17A1-202ENST00000369733 KIFC1Q9BW19 673 aa15.77■□□□□ 0.12
COL17A1-202ENST00000369733 ERVK-6Q9BXR3 956 aa15.77■□□□□ 0.12
COL17A1-202ENST00000369733 AKTIPQ9H8T0 292 aa15.77■□□□□ 0.12
COL17A1-202ENST00000369733 A0A088AWK7 358 aa15.77■□□□□ 0.11
COL17A1-202ENST00000369733 DLX3O60479 287 aa15.77■□□□□ 0.11
COL17A1-202ENST00000369733 TBL1XO60907 577 aa15.77■□□□□ 0.11
COL17A1-202ENST00000369733 RGS20O76081 388 aa15.77■□□□□ 0.11
COL17A1-202ENST00000369733 NDUFV1P49821 464 aa15.77■□□□□ 0.11
COL17A1-202ENST00000369733 SNRPD1P62314 119 aaKnown RBP15.77■□□□□ 0.11
COL17A1-202ENST00000369733 HKDC1Q2TB90 917 aa15.77■□□□□ 0.11
COL17A1-202ENST00000369733 THOC7Q6I9Y2 204 aaKnown RBP15.77■□□□□ 0.11
COL17A1-202ENST00000369733 DOK6Q6PKX4 331 aa15.77■□□□□ 0.11
COL17A1-202ENST00000369733 COPS8Q99627 209 aa15.77■□□□□ 0.11
COL17A1-202ENST00000369733 ADAM7Q9H2U9 754 aa15.77■□□□□ 0.11
COL17A1-202ENST00000369733 SLC28A2O43868 658 aa15.77■□□□□ 0.11
COL17A1-202ENST00000369733 CLDN9O95484 217 aa15.77■□□□□ 0.11
COL17A1-202ENST00000369733 MXD1Q05195 221 aa15.77■□□□□ 0.11
COL17A1-202ENST00000369733 NPTX1Q15818 432 aa15.77■□□□□ 0.11
COL17A1-202ENST00000369733 PARP15Q460N3 678 aa15.77■□□□□ 0.11
COL17A1-202ENST00000369733 CRY2Q49AN0 593 aa15.77■□□□□ 0.11
COL17A1-202ENST00000369733 TLDC1Q6P9B6 456 aa15.77■□□□□ 0.11
COL17A1-202ENST00000369733 ZFP28Q8NHY6 868 aa15.77■□□□□ 0.11
COL17A1-202ENST00000369733 ISOC1Q96CN7 298 aa15.77■□□□□ 0.11
COL17A1-202ENST00000369733 FBXL18Q96ME1 805 aa15.77■□□□□ 0.11
COL17A1-202ENST00000369733 TXLNGYQ9BZA5 131 aa15.77■□□□□ 0.11
COL17A1-202ENST00000369733 UGT2B17O75795 530 aa15.76■□□□□ 0.11
COL17A1-202ENST00000369733 BUD31P41223 144 aaPredicted RBP15.76■□□□□ 0.11
COL17A1-202ENST00000369733 IPCEF1Q8WWN9 437 aaPredicted RBP15.76■□□□□ 0.11
COL17A1-202ENST00000369733 TMBIM1Q969X1 311 aa15.76■□□□□ 0.11
COL17A1-202ENST00000369733 TINF2Q9BSI4 451 aa15.76■□□□□ 0.11
COL17A1-202ENST00000369733 H7C0S8 307 aa15.76■□□□□ 0.11
COL17A1-202ENST00000369733 FAM174BQ3ZCQ3 159 aa15.76■□□□□ 0.11
COL17A1-202ENST00000369733 CFAP52Q8N1V2 620 aa15.76■□□□□ 0.11
COL17A1-202ENST00000369733 VANGL1Q8TAA9 524 aaPredicted RBP15.76■□□□□ 0.11
COL17A1-202ENST00000369733 GRIN3AQ8TCU5 1115 aa15.76■□□□□ 0.11
COL17A1-202ENST00000369733 FBXL20Q96IG2 436 aa15.76■□□□□ 0.11
COL17A1-202ENST00000369733 AARSD1Q9BTE6 412 aaKnown RBP15.76■□□□□ 0.11
COL17A1-202ENST00000369733 MCUBQ9NWR8 336 aa15.76■□□□□ 0.11
COL17A1-202ENST00000369733 COMMD9Q9P000 198 aa15.76■□□□□ 0.11
COL17A1-202ENST00000369733 A8MT66 165 aa15.76■□□□□ 0.11
COL17A1-202ENST00000369733 FADS2P1A8MWK0 482 aa15.76■□□□□ 0.11
COL17A1-202ENST00000369733 SLC7A4O43246 635 aa15.76■□□□□ 0.11
COL17A1-202ENST00000369733 HTRA2O43464 458 aaPredicted RBP15.76■□□□□ 0.11
COL17A1-202ENST00000369733 STK16O75716 305 aa15.76■□□□□ 0.11
COL17A1-202ENST00000369733 CLPXO76031 633 aa15.76■□□□□ 0.11
COL17A1-202ENST00000369733 S100A9P06702 114 aaKnown RBP15.76■□□□□ 0.11
COL17A1-202ENST00000369733 TM4SF1P30408 202 aa15.76■□□□□ 0.11
COL17A1-202ENST00000369733 HTR7P34969 479 aa15.76■□□□□ 0.11
COL17A1-202ENST00000369733 MTAPQ13126 283 aa15.76■□□□□ 0.11
COL17A1-202ENST00000369733 HNRNPABQ99729 332 aaKnown RBP15.76■□□□□ 0.11
COL17A1-202ENST00000369733 GPR88Q9GZN0 384 aa15.76■□□□□ 0.11
COL17A1-202ENST00000369733 MAP10Q9P2G4 905 aa15.76■□□□□ 0.11
COL17A1-202ENST00000369733 FBXW11Q9UKB1 542 aa15.76■□□□□ 0.11
COL17A1-202ENST00000369733 KCNE2Q9Y6J6 123 aa15.76■□□□□ 0.11
COL17A1-202ENST00000369733 MYOCOSA0A1B0GUC4 107 aa15.76■□□□□ 0.11
COL17A1-202ENST00000369733 ADAMDEC1O15204 470 aa15.76■□□□□ 0.11
COL17A1-202ENST00000369733 TSPAN1O60635 241 aa15.76■□□□□ 0.11
COL17A1-202ENST00000369733 CYP11A1P05108 521 aa15.76■□□□□ 0.11
COL17A1-202ENST00000369733 FGF3P11487 239 aaPredicted RBP15.76■□□□□ 0.11
COL17A1-202ENST00000369733 MRPS6P82932 125 aaKnown RBP15.76■□□□□ 0.11
COL17A1-202ENST00000369733 LSAMPQ13449 338 aa15.76■□□□□ 0.11
COL17A1-202ENST00000369733 C6orf183Q5T699 404 aa15.76■□□□□ 0.11
COL17A1-202ENST00000369733 KHDRBS2Q5VWX1 349 aaKnown RBP15.76■□□□□ 0.11
COL17A1-202ENST00000369733 ESAMQ96AP7 390 aa15.76■□□□□ 0.11
COL17A1-202ENST00000369733 TRPV5Q9NQA5 729 aa15.76■□□□□ 0.11
COL17A1-202ENST00000369733 TESMINQ9Y4I5 508 aa15.76■□□□□ 0.11
COL17A1-202ENST00000369733 MPZL2O60487 215 aa15.75■□□□□ 0.11
COL17A1-202ENST00000369733 HOXC6P09630 235 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms