RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 POLR2JP52435 117 aaKnown RBP10.47□□□□□ -0.73
SMC3-201ENST00000361804 STC1P52823 247 aa10.47□□□□□ -0.73
SMC3-201ENST00000361804 ZNF33AQ06730 810 aa10.47□□□□□ -0.73
SMC3-201ENST00000361804 MEP1AQ16819 746 aa10.47□□□□□ -0.73
SMC3-201ENST00000361804 GTDC1Q4AE62 458 aa10.47□□□□□ -0.73
SMC3-201ENST00000361804 TRMOQ9BU70 441 aa10.47□□□□□ -0.73
SMC3-201ENST00000361804 LHPPQ9H008 270 aa10.47□□□□□ -0.73
SMC3-201ENST00000361804 AP5M1Q9H0R1 490 aa10.47□□□□□ -0.73
SMC3-201ENST00000361804 CCSER2Q9H7U1 834 aa10.47□□□□□ -0.73
SMC3-201ENST00000361804 PLGRKTQ9HBL7 147 aa10.47□□□□□ -0.73
SMC3-201ENST00000361804 PRDM8Q9NQV8 689 aa10.47□□□□□ -0.73
SMC3-201ENST00000361804 PRDM5Q9NQX1 630 aaPredicted RBP10.47□□□□□ -0.73
SMC3-201ENST00000361804 IQCA1LA6NCM1 817 aa10.47□□□□□ -0.73
SMC3-201ENST00000361804 RAMP2O60895 175 aa10.47□□□□□ -0.73
SMC3-201ENST00000361804 SLC22A3O75751 556 aa10.47□□□□□ -0.73
SMC3-201ENST00000361804 LDLRP01130 860 aa10.47□□□□□ -0.73
SMC3-201ENST00000361804 DNAJB1P25685 340 aa10.47□□□□□ -0.73
SMC3-201ENST00000361804 PBX3P40426 434 aa10.47□□□□□ -0.73
SMC3-201ENST00000361804 LSM3P62310 102 aaKnown RBP10.47□□□□□ -0.73
SMC3-201ENST00000361804 TSPY1Q01534 308 aa10.47□□□□□ -0.73
SMC3-201ENST00000361804 GALNT1Q10472 559 aaPredicted RBP10.47□□□□□ -0.73
SMC3-201ENST00000361804 RCAN2Q14206 197 aa10.47□□□□□ -0.73
SMC3-201ENST00000361804 PTGR1Q14914 329 aa10.47□□□□□ -0.73
SMC3-201ENST00000361804 GALNT18Q6P9A2 607 aa10.47□□□□□ -0.73
SMC3-201ENST00000361804 MILR1Q7Z6M3 343 aa10.47□□□□□ -0.73
SMC3-201ENST00000361804 CLEC4FQ8N1N0 589 aa10.47□□□□□ -0.73
SMC3-201ENST00000361804 SNX19Q92543 992 aa10.47□□□□□ -0.73
SMC3-201ENST00000361804 ITFG2Q969R8 447 aa10.47□□□□□ -0.73
SMC3-201ENST00000361804 ACDQ96AP0 544 aa10.47□□□□□ -0.73
SMC3-201ENST00000361804 BIRC8Q96P09 236 aa10.47□□□□□ -0.73
SMC3-201ENST00000361804 GID8Q9NWU2 228 aa10.47□□□□□ -0.73
SMC3-201ENST00000361804 PRRC2BQ5JSZ5 2229 aaKnown RBP10.47□□□□□ -0.73
SMC3-201ENST00000361804 SLC12A8A0AV02 714 aa10.47□□□□□ -0.73
SMC3-201ENST00000361804 M0QZ92 97 aa10.47□□□□□ -0.73
SMC3-201ENST00000361804 UPK1AO00322 258 aa10.47□□□□□ -0.73
SMC3-201ENST00000361804 GPR182O15218 404 aa10.47□□□□□ -0.73
SMC3-201ENST00000361804 DFNA5O60443 496 aa10.47□□□□□ -0.73
SMC3-201ENST00000361804 GUCA1CO95843 209 aa10.47□□□□□ -0.73
SMC3-201ENST00000361804 TPP2P29144 1249 aaPredicted RBP10.47□□□□□ -0.73
SMC3-201ENST00000361804 GDF5P43026 501 aa10.47□□□□□ -0.73
SMC3-201ENST00000361804 NUP107P57740 925 aa10.47□□□□□ -0.73
SMC3-201ENST00000361804 ERVPABLB-1P60509 514 aa10.47□□□□□ -0.73
SMC3-201ENST00000361804 ZNF235Q14590 738 aa10.47□□□□□ -0.73
SMC3-201ENST00000361804 SGO1Q5FBB7 561 aa10.47□□□□□ -0.73
SMC3-201ENST00000361804 C10orf120Q5SQS8 335 aa10.47□□□□□ -0.73
SMC3-201ENST00000361804 Q6ZNX1 250 aa10.47□□□□□ -0.73
SMC3-201ENST00000361804 Q6ZSR9 355 aa10.47□□□□□ -0.73
SMC3-201ENST00000361804 UMODL1-AS1Q8N2C9 162 aa10.47□□□□□ -0.73
SMC3-201ENST00000361804 C10orf111Q8N326 155 aa10.47□□□□□ -0.73
SMC3-201ENST00000361804 STON2Q8WXE9 905 aa10.47□□□□□ -0.73
SMC3-201ENST00000361804 AURKBQ96GD4 344 aaPredicted RBP10.47□□□□□ -0.73
SMC3-201ENST00000361804 CRISPLD1Q9H336 500 aa10.47□□□□□ -0.73
SMC3-201ENST00000361804 AIG1Q9NVV5 245 aa10.47□□□□□ -0.73
SMC3-201ENST00000361804 LOC285095A0A1B0GVY8 99 aa10.46□□□□□ -0.73
SMC3-201ENST00000361804 PTGES3LE9PB15 166 aa10.46□□□□□ -0.73
SMC3-201ENST00000361804 FGF4P08620 206 aa10.46□□□□□ -0.73
SMC3-201ENST00000361804 IDO1P14902 403 aa10.46□□□□□ -0.73
SMC3-201ENST00000361804 MAP4P27816 1152 aaKnown RBP10.46□□□□□ -0.73
SMC3-201ENST00000361804 CA5AP35218 305 aa10.46□□□□□ -0.73
SMC3-201ENST00000361804 TGFBIQ15582 683 aa10.46□□□□□ -0.73
SMC3-201ENST00000361804 C6orf136Q5SQH8 315 aa10.46□□□□□ -0.73
SMC3-201ENST00000361804 TMTC4Q5T4D3 741 aa10.46□□□□□ -0.73
SMC3-201ENST00000361804 ACBD5Q5T8D3 534 aaPredicted RBP10.46□□□□□ -0.73
SMC3-201ENST00000361804 ANKS6Q68DC2 871 aa10.46□□□□□ -0.73
SMC3-201ENST00000361804 NADSYN1Q6IA69 706 aa10.46□□□□□ -0.73
SMC3-201ENST00000361804 MSANTD2Q6P1R3 559 aa10.46□□□□□ -0.73
SMC3-201ENST00000361804 PHACTR4Q8IZ21 702 aa10.46□□□□□ -0.73
SMC3-201ENST00000361804 SFRP1Q8N474 314 aa10.46□□□□□ -0.73
SMC3-201ENST00000361804 BHMTQ93088 406 aa10.46□□□□□ -0.73
SMC3-201ENST00000361804 PLEKHA8Q96JA3 519 aa10.46□□□□□ -0.73
SMC3-201ENST00000361804 ACTL8Q9H568 366 aa10.46□□□□□ -0.73
SMC3-201ENST00000361804 FARSBQ9NSD9 589 aaKnown RBP10.46□□□□□ -0.73
SMC3-201ENST00000361804 CD274Q9NZQ7 290 aa10.46□□□□□ -0.73
SMC3-201ENST00000361804 FKBPLQ9UIM3 349 aa10.46□□□□□ -0.73
SMC3-201ENST00000361804 POLR3HQ9Y535 204 aaPredicted RBP10.46□□□□□ -0.73
SMC3-201ENST00000361804 MOXD2PA6NHM9 499 aa10.46□□□□□ -0.74
SMC3-201ENST00000361804 BBIP1A8MTZ0 92 aa10.46□□□□□ -0.74
SMC3-201ENST00000361804 INPPL1O15357 1258 aa10.46□□□□□ -0.74
SMC3-201ENST00000361804 SNX2O60749 519 aa10.46□□□□□ -0.74
SMC3-201ENST00000361804 RPP40O75818 363 aaKnown RBP10.46□□□□□ -0.74
SMC3-201ENST00000361804 RXRGP48443 463 aa10.46□□□□□ -0.74
SMC3-201ENST00000361804 ATP4BP51164 291 aa10.46□□□□□ -0.74
SMC3-201ENST00000361804 NFKB2Q00653 900 aa10.46□□□□□ -0.74
SMC3-201ENST00000361804 SEMG2Q02383 582 aa10.46□□□□□ -0.74
SMC3-201ENST00000361804 PCBP1Q15365 356 aaKnown RBP eCLIP10.46□□□□□ -0.74
SMC3-201ENST00000361804 MRNIPQ6NTE8 343 aa10.46□□□□□ -0.74
SMC3-201ENST00000361804 C16orf87Q6PH81 154 aa10.46□□□□□ -0.74
SMC3-201ENST00000361804 LINGO4Q6UY18 593 aa10.46□□□□□ -0.74
SMC3-201ENST00000361804 R3HCC1LQ7Z5L2 792 aaKnown RBP10.46□□□□□ -0.74
SMC3-201ENST00000361804 SLC22A17Q8WUG5 538 aa10.46□□□□□ -0.74
SMC3-201ENST00000361804 RHNO1Q9BSD3 238 aa10.46□□□□□ -0.74
SMC3-201ENST00000361804 ING2Q9H160 280 aa10.46□□□□□ -0.74
SMC3-201ENST00000361804 SELENONQ9NZV5 590 aa10.46□□□□□ -0.74
SMC3-201ENST00000361804 PCTPQ9UKL6 214 aa10.46□□□□□ -0.74
SMC3-201ENST00000361804 PCDHGA11Q9Y5H2 935 aa10.46□□□□□ -0.74
SMC3-201ENST00000361804 TRPV2Q9Y5S1 764 aa10.46□□□□□ -0.74
SMC3-201ENST00000361804 PRAMEF12O95522 483 aa10.46□□□□□ -0.74
SMC3-201ENST00000361804 CYP2C18P33260 490 aa10.46□□□□□ -0.74
SMC3-201ENST00000361804 RPS24P62847 133 aaKnown RBP10.46□□□□□ -0.74
SMC3-201ENST00000361804 NFATC3Q12968 1075 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms