RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 FBXL18Q96ME1 805 aa18.4■□□□□ 0.54
CLIP2-202ENST00000361545 PNPLA8Q9NP80 782 aa18.4■□□□□ 0.54
CLIP2-202ENST00000361545 SATB2Q9UPW6 733 aa18.4■□□□□ 0.54
CLIP2-202ENST00000361545 TLL2Q9Y6L7 1015 aa18.4■□□□□ 0.54
CLIP2-202ENST00000361545 MCIDASD6RGH6 385 aa18.4■□□□□ 0.54
CLIP2-202ENST00000361545 WNT9AO14904 365 aa18.4■□□□□ 0.54
CLIP2-202ENST00000361545 SLC10A3P09131 477 aa18.4■□□□□ 0.54
CLIP2-202ENST00000361545 DHPSP49366 369 aaPredicted RBP18.4■□□□□ 0.54
CLIP2-202ENST00000361545 MAPK12P53778 367 aa18.4■□□□□ 0.54
CLIP2-202ENST00000361545 NRLP54845 237 aa18.4■□□□□ 0.54
CLIP2-202ENST00000361545 GPR17Q13304 367 aa18.4■□□□□ 0.54
CLIP2-202ENST00000361545 ADGRD1Q6QNK2 874 aa18.4■□□□□ 0.54
CLIP2-202ENST00000361545 SLC38A2Q96QD8 506 aa18.4■□□□□ 0.54
CLIP2-202ENST00000361545 HS3ST4Q9Y661 456 aa18.4■□□□□ 0.54
CLIP2-202ENST00000361545 SLC7A4O43246 635 aa18.4■□□□□ 0.54
CLIP2-202ENST00000361545 ENTPD5O75356 428 aa18.4■□□□□ 0.54
CLIP2-202ENST00000361545 MTX2O75431 263 aa18.4■□□□□ 0.54
CLIP2-202ENST00000361545 TOP3BO95985 862 aaKnown RBP18.4■□□□□ 0.54
CLIP2-202ENST00000361545 PPIBP23284 216 aaKnown RBP18.4■□□□□ 0.54
CLIP2-202ENST00000361545 KCNJ2P63252 427 aa18.4■□□□□ 0.54
CLIP2-202ENST00000361545 LDLRAP1Q5SW96 308 aa18.4■□□□□ 0.54
CLIP2-202ENST00000361545 VWA5B1Q5TIE3 1220 aa18.4■□□□□ 0.54
CLIP2-202ENST00000361545 SPATA19Q7Z5L4 167 aa18.4■□□□□ 0.54
CLIP2-202ENST00000361545 AMZ2Q86W34 360 aa18.4■□□□□ 0.54
CLIP2-202ENST00000361545 CARS2Q9HA77 564 aaKnown RBP18.4■□□□□ 0.54
CLIP2-202ENST00000361545 DNAJB4Q9UDY4 337 aa18.4■□□□□ 0.54
CLIP2-202ENST00000361545 OR4F21O95013 312 aa18.4■□□□□ 0.54
CLIP2-202ENST00000361545 BCL10O95999 233 aa18.4■□□□□ 0.54
CLIP2-202ENST00000361545 ACP5P13686 325 aa18.4■□□□□ 0.54
CLIP2-202ENST00000361545 RFC2P35250 354 aa18.4■□□□□ 0.54
CLIP2-202ENST00000361545 SLC1A2P43004 574 aa18.4■□□□□ 0.54
CLIP2-202ENST00000361545 ZNF280BQ86YH2 543 aa18.4■□□□□ 0.54
CLIP2-202ENST00000361545 UNC5BQ8IZJ1 945 aa18.4■□□□□ 0.54
CLIP2-202ENST00000361545 BPIFB1Q8TDL5 484 aa18.4■□□□□ 0.54
CLIP2-202ENST00000361545 MTMR11A4FU01 709 aa18.39■□□□□ 0.53
CLIP2-202ENST00000361545 J3KR12 359 aa18.39■□□□□ 0.53
CLIP2-202ENST00000361545 PRG2P13727 222 aa18.39■□□□□ 0.53
CLIP2-202ENST00000361545 ELF3P78545 371 aaPredicted RBP18.39■□□□□ 0.53
CLIP2-202ENST00000361545 SLC44A4Q53GD3 710 aa18.39■□□□□ 0.53
CLIP2-202ENST00000361545 TRMT10BQ6PF06 316 aaKnown RBP18.39■□□□□ 0.53
CLIP2-202ENST00000361545 ZYG11AQ6WRX3 759 aa18.39■□□□□ 0.53
CLIP2-202ENST00000361545 KCTD13Q8WZ19 329 aa18.39■□□□□ 0.53
CLIP2-202ENST00000361545 TCF12Q99081 682 aa18.39■□□□□ 0.53
CLIP2-202ENST00000361545 EBPLQ9BY08 206 aa18.39■□□□□ 0.53
CLIP2-202ENST00000361545 PRRG4Q9BZD6 226 aa18.39■□□□□ 0.53
CLIP2-202ENST00000361545 WDR26Q9H7D7 661 aa18.39■□□□□ 0.53
CLIP2-202ENST00000361545 LRCH1Q9Y2L9 728 aa18.39■□□□□ 0.53
CLIP2-202ENST00000361545 DHRS12A0PJE2 317 aa18.39■□□□□ 0.53
CLIP2-202ENST00000361545 CLDN4O14493 209 aa18.39■□□□□ 0.53
CLIP2-202ENST00000361545 PMM2O15305 246 aa18.39■□□□□ 0.53
CLIP2-202ENST00000361545 ATP12AP54707 1039 aa18.39■□□□□ 0.53
CLIP2-202ENST00000361545 ZNF155Q12901 538 aaPredicted RBP18.39■□□□□ 0.53
CLIP2-202ENST00000361545 TRIM32Q13049 653 aa18.39■□□□□ 0.53
CLIP2-202ENST00000361545 LCP2Q13094 533 aa18.39■□□□□ 0.53
CLIP2-202ENST00000361545 GRM2Q14416 872 aa18.39■□□□□ 0.53
CLIP2-202ENST00000361545 TRIM71Q2Q1W2 868 aaKnown RBP18.39■□□□□ 0.53
CLIP2-202ENST00000361545 TXNRD3NBQ6F5E7 133 aa18.39■□□□□ 0.53
CLIP2-202ENST00000361545 MIEF2Q96C03 454 aa18.39■□□□□ 0.53
CLIP2-202ENST00000361545 ILVBLA1L0T0 632 aa18.39■□□□□ 0.53
CLIP2-202ENST00000361545 CCDC162PA2VCL2 907 aa18.39■□□□□ 0.53
CLIP2-202ENST00000361545 POLR2JP52435 117 aaKnown RBP18.39■□□□□ 0.53
CLIP2-202ENST00000361545 TAS2R39P59534 338 aa18.39■□□□□ 0.53
CLIP2-202ENST00000361545 CPSF7Q8N684 471 aaKnown RBP18.39■□□□□ 0.53
CLIP2-202ENST00000361545 PHC3Q8NDX5 983 aa18.39■□□□□ 0.53
CLIP2-202ENST00000361545 ZNF671Q8TAW3 534 aa18.39■□□□□ 0.53
CLIP2-202ENST00000361545 ZNF184Q99676 751 aaPredicted RBP18.39■□□□□ 0.53
CLIP2-202ENST00000361545 RIOK2Q9BVS4 552 aaKnown RBP18.39■□□□□ 0.53
CLIP2-202ENST00000361545 TOR4AQ9NXH8 423 aa18.39■□□□□ 0.53
CLIP2-202ENST00000361545 GDAP2Q9NXN4 497 aa18.39■□□□□ 0.53
CLIP2-202ENST00000361545 MAP4K5Q9Y4K4 846 aa18.39■□□□□ 0.53
CLIP2-202ENST00000361545 LOC100506127A0A0U1RQW1 187 aa18.39■□□□□ 0.53
CLIP2-202ENST00000361545 IL6P05231 212 aa18.39■□□□□ 0.53
CLIP2-202ENST00000361545 KLHL12Q53G59 568 aa18.39■□□□□ 0.53
CLIP2-202ENST00000361545 RALGPS2Q86X27 583 aaPredicted RBP18.39■□□□□ 0.53
CLIP2-202ENST00000361545 UXS1Q8NBZ7 420 aa18.39■□□□□ 0.53
CLIP2-202ENST00000361545 PCYT2Q99447 389 aa18.39■□□□□ 0.53
CLIP2-202ENST00000361545 MRTO4Q9UKD2 239 aaKnown RBP18.39■□□□□ 0.53
CLIP2-202ENST00000361545 COQ6Q9Y2Z9 468 aa18.39■□□□□ 0.53
CLIP2-202ENST00000361545 GNSP15586 552 aa18.38■□□□□ 0.53
CLIP2-202ENST00000361545 CDH5P33151 784 aaPredicted RBP18.38■□□□□ 0.53
CLIP2-202ENST00000361545 BLKP51451 505 aa18.38■□□□□ 0.53
CLIP2-202ENST00000361545 LBX1P52954 281 aa18.38■□□□□ 0.53
CLIP2-202ENST00000361545 HTRA3P83110 453 aa18.38■□□□□ 0.53
CLIP2-202ENST00000361545 PPIDQ08752 370 aaKnown RBP18.38■□□□□ 0.53
CLIP2-202ENST00000361545 NCBP2-AS2Q69YL0 99 aa18.38■□□□□ 0.53
CLIP2-202ENST00000361545 IQCKQ8N0W5 287 aa18.38■□□□□ 0.53
CLIP2-202ENST00000361545 FCRL5Q96RD9 977 aa18.38■□□□□ 0.53
CLIP2-202ENST00000361545 SMOQ99835 787 aa18.38■□□□□ 0.53
CLIP2-202ENST00000361545 C16orf70Q9BSU1 422 aa18.38■□□□□ 0.53
CLIP2-202ENST00000361545 BCO2Q9BYV7 579 aa18.38■□□□□ 0.53
CLIP2-202ENST00000361545 C3orf18Q9UK00 162 aa18.38■□□□□ 0.53
CLIP2-202ENST00000361545 SCML2Q9UQR0 700 aa18.38■□□□□ 0.53
CLIP2-202ENST00000361545 U3KQV3 271 aa18.38■□□□□ 0.53
CLIP2-202ENST00000361545 ALPPL2P10696 532 aa18.38■□□□□ 0.53
CLIP2-202ENST00000361545 PLA2G16P53816 162 aa18.38■□□□□ 0.53
CLIP2-202ENST00000361545 DNASE1L2Q92874 299 aa18.38■□□□□ 0.53
CLIP2-202ENST00000361545 EBF3Q9H4W6 596 aa18.38■□□□□ 0.53
CLIP2-202ENST00000361545 DUOX1Q9NRD9 1551 aa18.38■□□□□ 0.53
CLIP2-202ENST00000361545 NBNO60934 754 aa18.38■□□□□ 0.53
CLIP2-202ENST00000361545 KRT36O76013 467 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms