RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 TIFAQ96CG3 184 aa20.1■□□□□ 0.81
CDC42BPB-201ENST00000361246 CYP8B1Q9UNU6 501 aa20.1■□□□□ 0.81
CDC42BPB-201ENST00000361246 GPC6Q9Y625 555 aaPredicted RBP20.1■□□□□ 0.81
CDC42BPB-201ENST00000361246 A0A0J9YVX5 310 aa20.1■□□□□ 0.81
CDC42BPB-201ENST00000361246 MMP20O60882 483 aa20.1■□□□□ 0.81
CDC42BPB-201ENST00000361246 NDST3O95803 873 aa20.1■□□□□ 0.81
CDC42BPB-201ENST00000361246 MT-ND1P03886 318 aa20.1■□□□□ 0.81
CDC42BPB-201ENST00000361246 RPL3P39023 403 aaKnown RBP20.1■□□□□ 0.81
CDC42BPB-201ENST00000361246 TIGD2Q4W5G0 525 aa20.1■□□□□ 0.81
CDC42BPB-201ENST00000361246 Q6ZVU0 165 aa20.1■□□□□ 0.81
CDC42BPB-201ENST00000361246 PIH1D2Q8WWB5 315 aa20.1■□□□□ 0.81
CDC42BPB-201ENST00000361246 LRRC39Q96DD0 335 aa20.1■□□□□ 0.81
CDC42BPB-201ENST00000361246 NOL6Q9H6R4 1146 aaKnown RBP20.1■□□□□ 0.81
CDC42BPB-201ENST00000361246 IPPKQ9H8X2 491 aa20.1■□□□□ 0.81
CDC42BPB-201ENST00000361246 CHMP1AQ9HD42 196 aaPredicted RBP20.1■□□□□ 0.81
CDC42BPB-201ENST00000361246 ENOPH1Q9UHY7 261 aa20.1■□□□□ 0.81
CDC42BPB-201ENST00000361246 WARSP23381 471 aaKnown RBP20.1■□□□□ 0.81
CDC42BPB-201ENST00000361246 CHRNA4P43681 627 aa20.1■□□□□ 0.81
CDC42BPB-201ENST00000361246 C12orf56Q8IXR9 622 aa20.1■□□□□ 0.81
CDC42BPB-201ENST00000361246 ZNF433Q8N7K0 673 aaPredicted RBP20.1■□□□□ 0.81
CDC42BPB-201ENST00000361246 PHF24Q9UPV7 400 aa20.1■□□□□ 0.81
CDC42BPB-201ENST00000361246 TRAF6Q9Y4K3 522 aa20.1■□□□□ 0.81
CDC42BPB-201ENST00000361246 B3GALT2O43825 422 aa20.1■□□□□ 0.81
CDC42BPB-201ENST00000361246 TMEM164Q5U3C3 297 aa20.1■□□□□ 0.81
CDC42BPB-201ENST00000361246 TTC23Q5W5X9 447 aa20.1■□□□□ 0.81
CDC42BPB-201ENST00000361246 STRADAQ7RTN6 431 aa20.1■□□□□ 0.81
CDC42BPB-201ENST00000361246 SNX20Q7Z614 316 aa20.1■□□□□ 0.81
CDC42BPB-201ENST00000361246 DHRS1Q96LJ7 313 aa20.1■□□□□ 0.81
CDC42BPB-201ENST00000361246 SPAG4Q9NPE6 437 aa20.1■□□□□ 0.81
CDC42BPB-201ENST00000361246 ING3Q9NXR8 418 aa20.1■□□□□ 0.81
CDC42BPB-201ENST00000361246 PGM3O95394 542 aa20.1■□□□□ 0.81
CDC42BPB-201ENST00000361246 ANXA4P09525 319 aaPredicted RBP20.1■□□□□ 0.81
CDC42BPB-201ENST00000361246 GNALP38405 381 aa20.1■□□□□ 0.81
CDC42BPB-201ENST00000361246 MBLAC2Q68D91 279 aa20.1■□□□□ 0.81
CDC42BPB-201ENST00000361246 ERVK-5Q9HDB9 667 aa20.1■□□□□ 0.81
CDC42BPB-201ENST00000361246 C1QTNF8P60827 252 aa20.09■□□□□ 0.81
CDC42BPB-201ENST00000361246 PPP2R2BQ00005 443 aa20.09■□□□□ 0.81
CDC42BPB-201ENST00000361246 BST1Q10588 318 aa20.09■□□□□ 0.81
CDC42BPB-201ENST00000361246 ATCAYQ86WG3 371 aa20.09■□□□□ 0.81
CDC42BPB-201ENST00000361246 CPNE9Q8IYJ1 553 aa20.09■□□□□ 0.81
CDC42BPB-201ENST00000361246 NRP2O60462 931 aa20.09■□□□□ 0.81
CDC42BPB-201ENST00000361246 HOXB2P14652 356 aa20.09■□□□□ 0.81
CDC42BPB-201ENST00000361246 POU2F1P14859 743 aa20.09■□□□□ 0.81
CDC42BPB-201ENST00000361246 RNF144AP50876 292 aaPredicted RBP20.09■□□□□ 0.81
CDC42BPB-201ENST00000361246 SLC10A6Q3KNW5 377 aa20.09■□□□□ 0.81
CDC42BPB-201ENST00000361246 HNRNPLLQ8WVV9 542 aaKnown RBP20.09■□□□□ 0.81
CDC42BPB-201ENST00000361246 CDK15Q96Q40 435 aa20.09■□□□□ 0.81
CDC42BPB-201ENST00000361246 COL9A3Q14050 684 aaPredicted RBP20.09■□□□□ 0.81
CDC42BPB-201ENST00000361246 LIX1Q8N485 282 aa20.09■□□□□ 0.81
CDC42BPB-201ENST00000361246 SALL3Q9BXA9 1300 aa20.09■□□□□ 0.81
CDC42BPB-201ENST00000361246 LOC102724159A0A0B4J2E5 919 aa20.09■□□□□ 0.81
CDC42BPB-201ENST00000361246 A0A0J9YYE9 177 aa20.09■□□□□ 0.81
CDC42BPB-201ENST00000361246 CLDN9O95484 217 aa20.09■□□□□ 0.81
CDC42BPB-201ENST00000361246 CFHP08603 1231 aa20.09■□□□□ 0.81
CDC42BPB-201ENST00000361246 PWP2Q15269 919 aaKnown RBP20.09■□□□□ 0.81
CDC42BPB-201ENST00000361246 OLFML2AQ68BL7 652 aa20.09■□□□□ 0.81
CDC42BPB-201ENST00000361246 NIFKQ9BYG3 293 aaKnown RBP20.09■□□□□ 0.81
CDC42BPB-201ENST00000361246 NUAK2Q9H093 628 aa20.09■□□□□ 0.81
CDC42BPB-201ENST00000361246 TMLHEQ9NVH6 421 aa20.09■□□□□ 0.81
CDC42BPB-201ENST00000361246 LDB2O43679 373 aa20.09■□□□□ 0.81
CDC42BPB-201ENST00000361246 TRIM3O75382 744 aaPredicted RBP20.09■□□□□ 0.81
CDC42BPB-201ENST00000361246 CCKBRP32239 447 aa20.09■□□□□ 0.81
CDC42BPB-201ENST00000361246 DRG2P55039 364 aaKnown RBP20.09■□□□□ 0.81
CDC42BPB-201ENST00000361246 OAFQ86UD1 273 aa20.09■□□□□ 0.81
CDC42BPB-201ENST00000361246 ULK2Q8IYT8 1036 aa20.09■□□□□ 0.81
CDC42BPB-201ENST00000361246 PRELID2Q8N945 189 aa20.09■□□□□ 0.81
CDC42BPB-201ENST00000361246 MFSD3Q96ES6 412 aa20.09■□□□□ 0.81
CDC42BPB-201ENST00000361246 BCAS3Q9H6U6 928 aa20.09■□□□□ 0.81
CDC42BPB-201ENST00000361246 MYRFQ9Y2G1 1151 aa20.09■□□□□ 0.81
CDC42BPB-201ENST00000361246 PRODHO43272 600 aa20.08■□□□□ 0.81
CDC42BPB-201ENST00000361246 COLEC12Q5KU26 742 aa20.08■□□□□ 0.81
CDC42BPB-201ENST00000361246 LRRC49Q8IUZ0 686 aa20.08■□□□□ 0.81
CDC42BPB-201ENST00000361246 CDH19Q9H159 772 aa20.08■□□□□ 0.81
CDC42BPB-201ENST00000361246 INTS10Q9NVR2 710 aaKnown RBP20.08■□□□□ 0.81
CDC42BPB-201ENST00000361246 CICQ96RK0 1608 aaPredicted RBP20.08■□□□□ 0.81
CDC42BPB-201ENST00000361246 ALOX5P09917 674 aa20.08■□□□□ 0.81
CDC42BPB-201ENST00000361246 MRPS35P82673 323 aaKnown RBP20.08■□□□□ 0.81
CDC42BPB-201ENST00000361246 TMEM145Q8NBT3 493 aa20.08■□□□□ 0.81
CDC42BPB-201ENST00000361246 OR2L5Q8NG80 312 aa20.08■□□□□ 0.81
CDC42BPB-201ENST00000361246 TFAP2BQ92481 460 aa20.08■□□□□ 0.81
CDC42BPB-201ENST00000361246 EIF2B4Q9UI10 523 aaKnown RBP20.08■□□□□ 0.81
CDC42BPB-201ENST00000361246 MYOCOSA0A1B0GUC4 107 aa20.08■□□□□ 0.81
CDC42BPB-201ENST00000361246 ITGA2P17301 1181 aa20.08■□□□□ 0.81
CDC42BPB-201ENST00000361246 PTNP21246 168 aa20.08■□□□□ 0.81
CDC42BPB-201ENST00000361246 PDHA2P29803 388 aa20.08■□□□□ 0.81
CDC42BPB-201ENST00000361246 GKP32189 559 aa20.08■□□□□ 0.81
CDC42BPB-201ENST00000361246 ZNF567Q8N184 647 aa20.08■□□□□ 0.81
CDC42BPB-201ENST00000361246 SHDQ96IW2 340 aa20.08■□□□□ 0.81
CDC42BPB-201ENST00000361246 TAPBPLQ9BX59 468 aa20.08■□□□□ 0.81
CDC42BPB-201ENST00000361246 WDR26Q9H7D7 661 aa20.08■□□□□ 0.81
CDC42BPB-201ENST00000361246 CDH7Q9ULB5 785 aa20.08■□□□□ 0.81
CDC42BPB-201ENST00000361246 G3V2T6 193 aa20.08■□□□□ 0.8
CDC42BPB-201ENST00000361246 SLC7A2P52569 658 aa20.08■□□□□ 0.8
CDC42BPB-201ENST00000361246 CHIT1Q13231 466 aa20.08■□□□□ 0.8
CDC42BPB-201ENST00000361246 AMZ2Q86W34 360 aa20.08■□□□□ 0.8
CDC42BPB-201ENST00000361246 HEXDCQ8WVB3 486 aa20.08■□□□□ 0.8
CDC42BPB-201ENST00000361246 AGAP2Q99490 1192 aa20.08■□□□□ 0.8
CDC42BPB-201ENST00000361246 TMEM27Q9HBJ8 222 aa20.08■□□□□ 0.8
CDC42BPB-201ENST00000361246 RASSF1Q9NS23 344 aa20.08■□□□□ 0.8
CDC42BPB-201ENST00000361246 C5orf60A6NFR6 353 aa20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms