RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 GLUD2P49448 558 aa18.22■□□□□ 0.51
SHANK1-202ENST00000359082 CCDC115Q96NT0 180 aa18.22■□□□□ 0.51
SHANK1-202ENST00000359082 PCDHB18PQ96TA0 734 aa18.22■□□□□ 0.51
SHANK1-202ENST00000359082 PLEKHA1Q9HB21 404 aa18.22■□□□□ 0.51
SHANK1-202ENST00000359082 CHRAC1Q9NRG0 131 aa18.22■□□□□ 0.51
SHANK1-202ENST00000359082 CMPK1P30085 196 aa18.22■□□□□ 0.51
SHANK1-202ENST00000359082 KIR3DL1P43629 444 aa18.22■□□□□ 0.51
SHANK1-202ENST00000359082 ITGA7Q13683 1181 aa18.22■□□□□ 0.51
SHANK1-202ENST00000359082 GFOD2Q3B7J2 385 aa18.22■□□□□ 0.51
SHANK1-202ENST00000359082 BORCS5Q969J3 196 aa18.22■□□□□ 0.51
SHANK1-202ENST00000359082 GTPBP3Q969Y2 492 aaKnown RBP18.22■□□□□ 0.51
SHANK1-202ENST00000359082 GBA3Q9H227 469 aa18.22■□□□□ 0.51
SHANK1-202ENST00000359082 IPPKQ9H8X2 491 aa18.22■□□□□ 0.51
SHANK1-202ENST00000359082 S100A6P06703 90 aa18.22■□□□□ 0.51
SHANK1-202ENST00000359082 EPHX1P07099 455 aa18.22■□□□□ 0.51
SHANK1-202ENST00000359082 ANXA4P09525 319 aaPredicted RBP18.22■□□□□ 0.51
SHANK1-202ENST00000359082 ARF4P18085 180 aaPredicted RBP18.22■□□□□ 0.51
SHANK1-202ENST00000359082 CD247P20963 164 aa18.22■□□□□ 0.51
SHANK1-202ENST00000359082 ZYG11AQ6WRX3 759 aa18.22■□□□□ 0.51
SHANK1-202ENST00000359082 ARMCX6Q7L4S7 300 aa18.22■□□□□ 0.51
SHANK1-202ENST00000359082 GALNT13Q8IUC8 556 aa18.22■□□□□ 0.51
SHANK1-202ENST00000359082 SIDT2Q8NBJ9 832 aaKnown RBP18.22■□□□□ 0.51
SHANK1-202ENST00000359082 NKD1Q969G9 470 aa18.22■□□□□ 0.51
SHANK1-202ENST00000359082 CITED4Q96RK1 184 aa18.22■□□□□ 0.51
SHANK1-202ENST00000359082 IFT46Q9NQC8 304 aa18.22■□□□□ 0.51
SHANK1-202ENST00000359082 RBMX2Q9Y388 322 aaKnown RBP18.22■□□□□ 0.51
SHANK1-202ENST00000359082 RIC1Q4ADV7 1423 aa18.22■□□□□ 0.51
SHANK1-202ENST00000359082 ELOVL7A1L3X0 281 aa18.22■□□□□ 0.51
SHANK1-202ENST00000359082 FADS2P1A8MWK0 482 aa18.22■□□□□ 0.51
SHANK1-202ENST00000359082 OR1F1O43749 312 aa18.22■□□□□ 0.51
SHANK1-202ENST00000359082 MMP3P08254 477 aa18.22■□□□□ 0.51
SHANK1-202ENST00000359082 PPM1AP35813 382 aa18.22■□□□□ 0.51
SHANK1-202ENST00000359082 MSANTD2Q6P1R3 559 aa18.22■□□□□ 0.51
SHANK1-202ENST00000359082 ERICH5Q6P6B1 374 aa18.22■□□□□ 0.51
SHANK1-202ENST00000359082 LRRC52Q8N7C0 313 aa18.22■□□□□ 0.51
SHANK1-202ENST00000359082 PXDNQ92626 1479 aa18.22■□□□□ 0.51
SHANK1-202ENST00000359082 FAM149AA5PLN7 773 aa18.21■□□□□ 0.51
SHANK1-202ENST00000359082 WRBO00258 174 aa18.21■□□□□ 0.51
SHANK1-202ENST00000359082 CHP2O43745 196 aa18.21■□□□□ 0.51
SHANK1-202ENST00000359082 FKTNO75072 461 aa18.21■□□□□ 0.51
SHANK1-202ENST00000359082 MXD1Q05195 221 aa18.21■□□□□ 0.51
SHANK1-202ENST00000359082 IRF2BP2Q7Z5L9 587 aa18.21■□□□□ 0.51
SHANK1-202ENST00000359082 ZMIZ2Q8NF64 920 aa18.21■□□□□ 0.51
SHANK1-202ENST00000359082 GAL3ST4Q96RP7 486 aa18.21■□□□□ 0.51
SHANK1-202ENST00000359082 C12orf65Q9H3J6 166 aaKnown RBP18.21■□□□□ 0.51
SHANK1-202ENST00000359082 ZNF221Q9UK13 617 aa18.21■□□□□ 0.51
SHANK1-202ENST00000359082 GNEQ9Y223 722 aaKnown RBP18.21■□□□□ 0.51
SHANK1-202ENST00000359082 DERAQ9Y315 318 aa18.21■□□□□ 0.51
SHANK1-202ENST00000359082 ENPP3O14638 875 aa18.21■□□□□ 0.51
SHANK1-202ENST00000359082 IDSP22304 550 aa18.21■□□□□ 0.51
SHANK1-202ENST00000359082 SLC26A9Q7LBE3 791 aa18.21■□□□□ 0.51
SHANK1-202ENST00000359082 NUDT4Q9NZJ9 180 aa18.21■□□□□ 0.51
SHANK1-202ENST00000359082 HCN1O60741 890 aa18.21■□□□□ 0.51
SHANK1-202ENST00000359082 SPATA31C1P0DKV0 1188 aa18.21■□□□□ 0.51
SHANK1-202ENST00000359082 LAMP2P13473 410 aa18.21■□□□□ 0.51
SHANK1-202ENST00000359082 IL12BP29460 328 aa18.21■□□□□ 0.51
SHANK1-202ENST00000359082 ZACNQ401N2 412 aa18.21■□□□□ 0.51
SHANK1-202ENST00000359082 TEX44Q53QW1 395 aa18.21■□□□□ 0.51
SHANK1-202ENST00000359082 FKBP1CQ5VVH2 108 aa18.21■□□□□ 0.51
SHANK1-202ENST00000359082 IL23RQ5VWK5 629 aa18.21■□□□□ 0.51
SHANK1-202ENST00000359082 TCEAL6Q6IPX3 200 aa18.21■□□□□ 0.51
SHANK1-202ENST00000359082 MED27Q6P2C8 311 aa18.21■□□□□ 0.51
SHANK1-202ENST00000359082 AHSA2Q719I0 299 aa18.21■□□□□ 0.51
SHANK1-202ENST00000359082 THAP5Q7Z6K1 395 aa18.21■□□□□ 0.51
SHANK1-202ENST00000359082 ZNF554Q86TJ5 538 aa18.21■□□□□ 0.51
SHANK1-202ENST00000359082 SLC9A9Q8IVB4 645 aa18.21■□□□□ 0.51
SHANK1-202ENST00000359082 TMLHEQ9NVH6 421 aa18.21■□□□□ 0.51
SHANK1-202ENST00000359082 CCDC59Q9P031 241 aaKnown RBP18.21■□□□□ 0.51
SHANK1-202ENST00000359082 CAPN8A6NHC0 703 aa18.21■□□□□ 0.51
SHANK1-202ENST00000359082 WTIPA6NIX2 430 aaPredicted RBP18.21■□□□□ 0.51
SHANK1-202ENST00000359082 PAX3P23760 479 aa18.21■□□□□ 0.51
SHANK1-202ENST00000359082 ZCCHC12Q6PEW1 402 aa18.21■□□□□ 0.51
SHANK1-202ENST00000359082 PPTC7Q8NI37 304 aa18.21■□□□□ 0.51
SHANK1-202ENST00000359082 hCG_2039718K7EN88 272 aa18.21■□□□□ 0.51
SHANK1-202ENST00000359082 CCL22O00626 93 aa18.21■□□□□ 0.51
SHANK1-202ENST00000359082 WFS1O76024 890 aa18.21■□□□□ 0.51
SHANK1-202ENST00000359082 THRBP10828 461 aa18.21■□□□□ 0.51
SHANK1-202ENST00000359082 POU2F1P14859 743 aa18.21■□□□□ 0.51
SHANK1-202ENST00000359082 TACR2P21452 398 aa18.21■□□□□ 0.51
SHANK1-202ENST00000359082 SLC5A3P53794 718 aa18.21■□□□□ 0.51
SHANK1-202ENST00000359082 CASP7P55210 303 aa18.21■□□□□ 0.51
SHANK1-202ENST00000359082 CCDC36Q8IYA8 594 aa18.21■□□□□ 0.51
SHANK1-202ENST00000359082 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.21■□□□□ 0.51
SHANK1-202ENST00000359082 FBXO15Q8NCQ5 510 aaPredicted RBP18.21■□□□□ 0.51
SHANK1-202ENST00000359082 IKZF4Q9H2S9 585 aa18.21■□□□□ 0.51
SHANK1-202ENST00000359082 SYNPO2Q9UMS6 1093 aa18.21■□□□□ 0.51
SHANK1-202ENST00000359082 FCF1Q9Y324 198 aaKnown RBP18.21■□□□□ 0.51
SHANK1-202ENST00000359082 FAM240BA0A1B0GVZ2 78 aa18.2■□□□□ 0.5
SHANK1-202ENST00000359082 COL6A1P12109 1028 aa18.2■□□□□ 0.5
SHANK1-202ENST00000359082 NCK1P16333 377 aa18.2■□□□□ 0.5
SHANK1-202ENST00000359082 NR4A1P22736 598 aa18.2■□□□□ 0.5
SHANK1-202ENST00000359082 RGS8P57771 180 aaPredicted RBP18.2■□□□□ 0.5
SHANK1-202ENST00000359082 LAPTM5Q13571 262 aa18.2■□□□□ 0.5
SHANK1-202ENST00000359082 SMARCD3Q6STE5 483 aa18.2■□□□□ 0.5
SHANK1-202ENST00000359082 GALNT7Q86SF2 657 aa18.2■□□□□ 0.5
SHANK1-202ENST00000359082 UNC5BQ8IZJ1 945 aa18.2■□□□□ 0.5
SHANK1-202ENST00000359082 SLC44A1Q8WWI5 657 aa18.2■□□□□ 0.5
SHANK1-202ENST00000359082 POP5Q969H6 163 aaKnown RBP18.2■□□□□ 0.5
SHANK1-202ENST00000359082 TLE6Q9H808 572 aa18.2■□□□□ 0.5
SHANK1-202ENST00000359082 TRPV5Q9NQA5 729 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms