RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 SLC38A8A6NNN8 435 aa12.14□□□□□ -0.47
COL20A1-201ENST00000358894 C5orf58C9J3I9 102 aa12.14□□□□□ -0.47
COL20A1-201ENST00000358894 ASNA1O43681 348 aa12.14□□□□□ -0.47
COL20A1-201ENST00000358894 ANXA6P08133 673 aa12.14□□□□□ -0.47
COL20A1-201ENST00000358894 UROSP10746 265 aa12.14□□□□□ -0.47
COL20A1-201ENST00000358894 UGT1A6P19224 532 aa12.14□□□□□ -0.47
COL20A1-201ENST00000358894 MS4A2Q01362 244 aa12.14□□□□□ -0.47
COL20A1-201ENST00000358894 RABL3Q5HYI8 236 aa12.14□□□□□ -0.47
COL20A1-201ENST00000358894 SPATA19Q7Z5L4 167 aa12.14□□□□□ -0.47
COL20A1-201ENST00000358894 TMEM132CQ8N3T6 1108 aa12.14□□□□□ -0.47
COL20A1-201ENST00000358894 FLCNQ8NFG4 579 aa12.14□□□□□ -0.47
COL20A1-201ENST00000358894 ANKRD49Q8WVL7 239 aa12.14□□□□□ -0.47
COL20A1-201ENST00000358894 BORCS5Q969J3 196 aa12.14□□□□□ -0.47
COL20A1-201ENST00000358894 IMP4Q96G21 291 aaKnown RBP12.14□□□□□ -0.47
COL20A1-201ENST00000358894 RPL10LQ96L21 214 aaKnown RBP12.14□□□□□ -0.47
COL20A1-201ENST00000358894 PTPN18Q99952 460 aa12.14□□□□□ -0.47
COL20A1-201ENST00000358894 ATP13A3Q9H7F0 1226 aa12.14□□□□□ -0.47
COL20A1-201ENST00000358894 TBC1D30Q9Y2I9 924 aa12.14□□□□□ -0.47
COL20A1-201ENST00000358894 EI24O14681 340 aa12.13□□□□□ -0.47
COL20A1-201ENST00000358894 RNASEH2AO75792 299 aaKnown RBP12.13□□□□□ -0.47
COL20A1-201ENST00000358894 EOMESO95936 686 aa12.13□□□□□ -0.47
COL20A1-201ENST00000358894 POU1F1P28069 291 aa12.13□□□□□ -0.47
COL20A1-201ENST00000358894 CCND3P30281 292 aaPredicted RBP12.13□□□□□ -0.47
COL20A1-201ENST00000358894 GATMP50440 423 aa12.13□□□□□ -0.47
COL20A1-201ENST00000358894 ACLYP53396 1101 aa12.13□□□□□ -0.47
COL20A1-201ENST00000358894 CDKN2DP55273 166 aa12.13□□□□□ -0.47
COL20A1-201ENST00000358894 RHDQ02161 417 aa12.13□□□□□ -0.47
COL20A1-201ENST00000358894 ACSM2AQ08AH3 577 aa12.13□□□□□ -0.47
COL20A1-201ENST00000358894 ACSM2BQ68CK6 577 aa12.13□□□□□ -0.47
COL20A1-201ENST00000358894 ATG14Q6ZNE5 492 aa12.13□□□□□ -0.47
COL20A1-201ENST00000358894 C11orf96Q7Z7L8 435 aa12.13□□□□□ -0.47
COL20A1-201ENST00000358894 ITIH5Q86UX2 942 aa12.13□□□□□ -0.47
COL20A1-201ENST00000358894 TBC1D21Q8IYX1 336 aa12.13□□□□□ -0.47
COL20A1-201ENST00000358894 LINC01465Q8N7H1 131 aa12.13□□□□□ -0.47
COL20A1-201ENST00000358894 HJURPQ8NCD3 748 aaPredicted RBP12.13□□□□□ -0.47
COL20A1-201ENST00000358894 FBXO22Q8NEZ5 403 aa12.13□□□□□ -0.47
COL20A1-201ENST00000358894 TMEM159Q96B96 161 aa12.13□□□□□ -0.47
COL20A1-201ENST00000358894 GPATCH1Q9BRR8 931 aaKnown RBP12.13□□□□□ -0.47
COL20A1-201ENST00000358894 ADI1Q9BV57 179 aa12.13□□□□□ -0.47
COL20A1-201ENST00000358894 ZNF556Q9HAH1 456 aa12.13□□□□□ -0.47
COL20A1-201ENST00000358894 PCDH12Q9NPG4 1184 aa12.13□□□□□ -0.47
COL20A1-201ENST00000358894 OAZ3Q9UMX2 235 aa12.13□□□□□ -0.47
COL20A1-201ENST00000358894 GABRQQ9UN88 632 aa12.13□□□□□ -0.47
COL20A1-201ENST00000358894 NUMBLQ9Y6R0 609 aa12.13□□□□□ -0.47
COL20A1-201ENST00000358894 COL11A2P13942 1736 aaPredicted RBP12.13□□□□□ -0.47
COL20A1-201ENST00000358894 TRIM64CA6NLI5 447 aa12.13□□□□□ -0.47
COL20A1-201ENST00000358894 FOXD2O60548 495 aaPredicted RBP12.13□□□□□ -0.47
COL20A1-201ENST00000358894 PRSS56P0CW18 603 aa12.13□□□□□ -0.47
COL20A1-201ENST00000358894 CYP2A7P20853 494 aa12.13□□□□□ -0.47
COL20A1-201ENST00000358894 JAK1P23458 1154 aa12.13□□□□□ -0.47
COL20A1-201ENST00000358894 PPP1R8Q12972 351 aaKnown RBP12.13□□□□□ -0.47
COL20A1-201ENST00000358894 TLR1Q15399 786 aa12.13□□□□□ -0.47
COL20A1-201ENST00000358894 ZNF678Q5SXM1 525 aa12.13□□□□□ -0.47
COL20A1-201ENST00000358894 ALKAL1Q6UXT8 129 aa12.13□□□□□ -0.47
COL20A1-201ENST00000358894 RANBP10Q6VN20 620 aa12.13□□□□□ -0.47
COL20A1-201ENST00000358894 CLDN19Q8N6F1 224 aa12.13□□□□□ -0.47
COL20A1-201ENST00000358894 KCNN1Q92952 543 aa12.13□□□□□ -0.47
COL20A1-201ENST00000358894 TMEM74Q96NL1 305 aa12.13□□□□□ -0.47
COL20A1-201ENST00000358894 COPS8Q99627 209 aa12.13□□□□□ -0.47
COL20A1-201ENST00000358894 EMILIN2Q9BXX0 1053 aa12.13□□□□□ -0.47
COL20A1-201ENST00000358894 REXO4Q9GZR2 422 aaKnown RBP12.13□□□□□ -0.47
COL20A1-201ENST00000358894 TFB2MQ9H5Q4 396 aaKnown RBP12.13□□□□□ -0.47
COL20A1-201ENST00000358894 ARMC7Q9H6L4 198 aa12.13□□□□□ -0.47
COL20A1-201ENST00000358894 IMPAD1Q9NX62 359 aa12.13□□□□□ -0.47
COL20A1-201ENST00000358894 ADGRE2Q9UHX3 823 aa12.13□□□□□ -0.47
COL20A1-201ENST00000358894 ZNF490Q9ULM2 529 aaPredicted RBP12.13□□□□□ -0.47
COL20A1-201ENST00000358894 COL4A5P29400 1685 aa12.13□□□□□ -0.47
COL20A1-201ENST00000358894 ALPIP09923 528 aa12.13□□□□□ -0.47
COL20A1-201ENST00000358894 UGT1A1P22309 533 aa12.13□□□□□ -0.47
COL20A1-201ENST00000358894 UGT1A4P22310 534 aa12.13□□□□□ -0.47
COL20A1-201ENST00000358894 UGT1A3P35503 534 aa12.13□□□□□ -0.47
COL20A1-201ENST00000358894 UGT1A5P35504 534 aa12.13□□□□□ -0.47
COL20A1-201ENST00000358894 AGTR2P50052 363 aa12.13□□□□□ -0.47
COL20A1-201ENST00000358894 DEFA1P59665 94 aa12.13□□□□□ -0.47
COL20A1-201ENST00000358894 DEFA3P59666 94 aa12.13□□□□□ -0.47
COL20A1-201ENST00000358894 C1QTNF8P60827 252 aa12.13□□□□□ -0.47
COL20A1-201ENST00000358894 TRIM32Q13049 653 aa12.13□□□□□ -0.47
COL20A1-201ENST00000358894 PDCD4Q53EL6 469 aaKnown RBP12.13□□□□□ -0.47
COL20A1-201ENST00000358894 FAM91A1Q658Y4 838 aa12.13□□□□□ -0.47
COL20A1-201ENST00000358894 ANKRD46Q86W74 232 aa12.13□□□□□ -0.47
COL20A1-201ENST00000358894 CACUL1Q86Y37 369 aa12.13□□□□□ -0.47
COL20A1-201ENST00000358894 RASAL3Q86YV0 1011 aa12.13□□□□□ -0.47
COL20A1-201ENST00000358894 SPNS2Q8IVW8 549 aa12.13□□□□□ -0.47
COL20A1-201ENST00000358894 ELMO1Q92556 727 aa12.13□□□□□ -0.47
COL20A1-201ENST00000358894 LRRC58Q96CX6 371 aa12.13□□□□□ -0.47
COL20A1-201ENST00000358894 AARSD1Q9BTE6 412 aaKnown RBP12.13□□□□□ -0.47
COL20A1-201ENST00000358894 DOCK5Q9H7D0 1870 aa12.13□□□□□ -0.47
COL20A1-201ENST00000358894 CLIC3O95833 236 aa12.12□□□□□ -0.47
COL20A1-201ENST00000358894 GABRR2P28476 465 aa12.12□□□□□ -0.47
COL20A1-201ENST00000358894 CLCN2P51788 898 aa12.12□□□□□ -0.47
COL20A1-201ENST00000358894 LSAMPQ13449 338 aa12.12□□□□□ -0.47
COL20A1-201ENST00000358894 USP45Q70EL2 814 aa12.12□□□□□ -0.47
COL20A1-201ENST00000358894 NECAB2Q7Z6G3 386 aa12.12□□□□□ -0.47
COL20A1-201ENST00000358894 SERPINA9Q86WD7 417 aa12.12□□□□□ -0.47
COL20A1-201ENST00000358894 FAM9CQ8IZT9 166 aa12.12□□□□□ -0.47
COL20A1-201ENST00000358894 SCAIQ8N9R8 606 aa12.12□□□□□ -0.47
COL20A1-201ENST00000358894 CENPNQ96H22 339 aaPredicted RBP12.12□□□□□ -0.47
COL20A1-201ENST00000358894 C6orf62Q9GZU0 229 aaPredicted RBP12.12□□□□□ -0.47
COL20A1-201ENST00000358894 RGS17Q9UGC6 210 aaPredicted RBP12.12□□□□□ -0.47
COL20A1-201ENST00000358894 USP3Q9Y6I4 520 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms