RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 TBC1D3HP0C7X1 549 aa17.91■□□□□ 0.46
SMARCD3-202ENST00000356800 TBC1D3GQ6DHY5 549 aa17.91■□□□□ 0.46
SMARCD3-202ENST00000356800 TBC1D3CQ6IPX1 549 aa17.91■□□□□ 0.46
SMARCD3-202ENST00000356800 ANO7Q6IWH7 933 aa17.91■□□□□ 0.46
SMARCD3-202ENST00000356800 LRRC8EQ6NSJ5 796 aa17.91■□□□□ 0.46
SMARCD3-202ENST00000356800 PNCKQ6P2M8 343 aa17.91■□□□□ 0.46
SMARCD3-202ENST00000356800 PIGWQ7Z7B1 504 aa17.91■□□□□ 0.46
SMARCD3-202ENST00000356800 TBC1D3Q8IZP1 549 aaPredicted RBP17.91■□□□□ 0.46
SMARCD3-202ENST00000356800 FSTL5Q8N475 847 aaPredicted RBP17.91■□□□□ 0.46
SMARCD3-202ENST00000356800 TP53I13Q8NBR0 393 aaPredicted RBP17.91■□□□□ 0.46
SMARCD3-202ENST00000356800 PJA1Q8NG27 643 aa17.91■□□□□ 0.46
SMARCD3-202ENST00000356800 RDH11Q8TC12 318 aa17.91■□□□□ 0.46
SMARCD3-202ENST00000356800 FUBP1Q96AE4 644 aaKnown RBP17.91■□□□□ 0.46
SMARCD3-202ENST00000356800 CLDN23Q96B33 292 aa17.91■□□□□ 0.46
SMARCD3-202ENST00000356800 SGF29Q96ES7 293 aa17.91■□□□□ 0.46
SMARCD3-202ENST00000356800 DCUN1D1Q96GG9 259 aa17.91■□□□□ 0.46
SMARCD3-202ENST00000356800 HHIPQ96QV1 700 aa17.91■□□□□ 0.46
SMARCD3-202ENST00000356800 KCTD5Q9NXV2 234 aa17.91■□□□□ 0.46
SMARCD3-202ENST00000356800 TRMT6Q9UJA5 497 aaKnown RBP17.91■□□□□ 0.46
SMARCD3-202ENST00000356800 TARM1B6A8C7 271 aa17.9■□□□□ 0.46
SMARCD3-202ENST00000356800 TK2O00142 265 aa17.9■□□□□ 0.46
SMARCD3-202ENST00000356800 TRIM16O95361 564 aa17.9■□□□□ 0.46
SMARCD3-202ENST00000356800 IGLV3-19P01714 112 aa17.9■□□□□ 0.46
SMARCD3-202ENST00000356800 PCCBP05166 539 aa17.9■□□□□ 0.46
SMARCD3-202ENST00000356800 MSH3P20585 1137 aa17.9■□□□□ 0.46
SMARCD3-202ENST00000356800 SKIV2L2P42285 1042 aaKnown RBP17.9■□□□□ 0.46
SMARCD3-202ENST00000356800 KPNA2P52292 529 aaKnown RBP17.9■□□□□ 0.46
SMARCD3-202ENST00000356800 SFSWAPQ12872 951 aaKnown RBP17.9■□□□□ 0.46
SMARCD3-202ENST00000356800 IRF4Q15306 451 aa17.9■□□□□ 0.46
SMARCD3-202ENST00000356800 FAM83EQ2M2I3 478 aa17.9■□□□□ 0.46
SMARCD3-202ENST00000356800 GKAP1Q5VSY0 366 aaPredicted RBP17.9■□□□□ 0.46
SMARCD3-202ENST00000356800 AGAP9Q5VTM2 703 aa17.9■□□□□ 0.46
SMARCD3-202ENST00000356800 NEK5Q6P3R8 708 aa17.9■□□□□ 0.46
SMARCD3-202ENST00000356800 ADAMTSL4Q6UY14 1074 aa17.9■□□□□ 0.46
SMARCD3-202ENST00000356800 PHYKPLQ8IUZ5 450 aa17.9■□□□□ 0.46
SMARCD3-202ENST00000356800 PGBD3Q8N328 593 aa17.9■□□□□ 0.46
SMARCD3-202ENST00000356800 RASGEF1AQ8N9B8 481 aa17.9■□□□□ 0.46
SMARCD3-202ENST00000356800 GRAMD1AQ96CP6 724 aa17.9■□□□□ 0.46
SMARCD3-202ENST00000356800 LENG8Q96PV6 779 aaPredicted RBP17.9■□□□□ 0.46
SMARCD3-202ENST00000356800 SLC17A9Q9BYT1 436 aa17.9■□□□□ 0.46
SMARCD3-202ENST00000356800 PITPNM3Q9BZ71 974 aa17.9■□□□□ 0.46
SMARCD3-202ENST00000356800 CHRDQ9H2X0 955 aa17.9■□□□□ 0.46
SMARCD3-202ENST00000356800 KDM4CQ9H3R0 1056 aa17.9■□□□□ 0.46
SMARCD3-202ENST00000356800 C10orf142B7Z368 130 aa17.9■□□□□ 0.46
SMARCD3-202ENST00000356800 CFAP99D6REC4 459 aa17.9■□□□□ 0.46
SMARCD3-202ENST00000356800 G3V2L1 256 aa17.9■□□□□ 0.46
SMARCD3-202ENST00000356800 RAD51BO15315 384 aa17.9■□□□□ 0.46
SMARCD3-202ENST00000356800 ZBTB14O43829 449 aa17.9■□□□□ 0.46
SMARCD3-202ENST00000356800 EDF1O60869 148 aaKnown RBP17.9■□□□□ 0.46
SMARCD3-202ENST00000356800 NEFHP12036 1026 aa17.9■□□□□ 0.46
SMARCD3-202ENST00000356800 CPA3P15088 417 aa17.9■□□□□ 0.46
SMARCD3-202ENST00000356800 CD1DP15813 335 aa17.9■□□□□ 0.46
SMARCD3-202ENST00000356800 BGNP21810 368 aa17.9■□□□□ 0.46
SMARCD3-202ENST00000356800 MAT2AP31153 395 aaKnown RBP17.9■□□□□ 0.46
SMARCD3-202ENST00000356800 CTSCP53634 463 aa17.9■□□□□ 0.46
SMARCD3-202ENST00000356800 TMEM115Q12893 351 aaPredicted RBP17.9■□□□□ 0.46
SMARCD3-202ENST00000356800 PCLAFQ15004 111 aa17.9■□□□□ 0.46
SMARCD3-202ENST00000356800 MAP7D1Q3KQU3 841 aa17.9■□□□□ 0.46
SMARCD3-202ENST00000356800 TECRLQ5HYJ1 363 aa17.9■□□□□ 0.46
SMARCD3-202ENST00000356800 ATG16L1Q676U5 607 aa17.9■□□□□ 0.46
SMARCD3-202ENST00000356800 NAPRTQ6XQN6 538 aa17.9■□□□□ 0.46
SMARCD3-202ENST00000356800 CPNE9Q8IYJ1 553 aa17.9■□□□□ 0.46
SMARCD3-202ENST00000356800 TSTD1Q8NFU3 115 aa17.9■□□□□ 0.46
SMARCD3-202ENST00000356800 PTERQ96BW5 349 aa17.9■□□□□ 0.46
SMARCD3-202ENST00000356800 COX14Q96I36 57 aa17.9■□□□□ 0.46
SMARCD3-202ENST00000356800 SCYL1Q96KG9 808 aa17.9■□□□□ 0.46
SMARCD3-202ENST00000356800 NECAB3Q96P71 396 aaPredicted RBP17.9■□□□□ 0.46
SMARCD3-202ENST00000356800 SYTL2Q9HCH5 934 aa17.9■□□□□ 0.46
SMARCD3-202ENST00000356800 SLCO1B3Q9NPD5 702 aa17.9■□□□□ 0.46
SMARCD3-202ENST00000356800 LATS2Q9NRM7 1088 aa17.9■□□□□ 0.46
SMARCD3-202ENST00000356800 CPSF2Q9P2I0 782 aaKnown RBP17.9■□□□□ 0.46
SMARCD3-202ENST00000356800 IKZF3Q9UKT9 509 aa17.9■□□□□ 0.46
SMARCD3-202ENST00000356800 STK25O00506 426 aa17.89■□□□□ 0.45
SMARCD3-202ENST00000356800 OR56A5P0C7T3 313 aa17.89■□□□□ 0.45
SMARCD3-202ENST00000356800 RALBP11234 206 aa17.89■□□□□ 0.45
SMARCD3-202ENST00000356800 ALDH3A1P30838 453 aa17.89■□□□□ 0.45
SMARCD3-202ENST00000356800 SGCGQ13326 291 aa17.89■□□□□ 0.45
SMARCD3-202ENST00000356800 UGT3A1Q6NUS8 523 aa17.89■□□□□ 0.45
SMARCD3-202ENST00000356800 KLC3Q6P597 504 aa17.89■□□□□ 0.45
SMARCD3-202ENST00000356800 ADGRG6Q86SQ4 1221 aa17.89■□□□□ 0.45
SMARCD3-202ENST00000356800 ISCA2Q86U28 154 aa17.89■□□□□ 0.45
SMARCD3-202ENST00000356800 EEF1AKMT1Q8WVE0 214 aa17.89■□□□□ 0.45
SMARCD3-202ENST00000356800 INPP5DQ92835 1189 aa17.89■□□□□ 0.45
SMARCD3-202ENST00000356800 HIC2Q96JB3 615 aa17.89■□□□□ 0.45
SMARCD3-202ENST00000356800 MRPL57Q9BQC6 102 aaKnown RBP17.89■□□□□ 0.45
SMARCD3-202ENST00000356800 DERL2Q9GZP9 239 aa17.89■□□□□ 0.45
SMARCD3-202ENST00000356800 BTBD1Q9H0C5 482 aa17.89■□□□□ 0.45
SMARCD3-202ENST00000356800 XPR1Q9UBH6 696 aa17.89■□□□□ 0.45
SMARCD3-202ENST00000356800 VCANP13611 3396 aa17.88■□□□□ 0.45
SMARCD3-202ENST00000356800 OR2AG2A6NM03 316 aa17.88■□□□□ 0.45
SMARCD3-202ENST00000356800 SNX3O60493 162 aa17.88■□□□□ 0.45
SMARCD3-202ENST00000356800 AP2A2O94973 939 aa17.88■□□□□ 0.45
SMARCD3-202ENST00000356800 TFEBP19484 476 aa17.88■□□□□ 0.45
SMARCD3-202ENST00000356800 KCNA4P22459 653 aa17.88■□□□□ 0.45
SMARCD3-202ENST00000356800 CCR7P32248 378 aa17.88■□□□□ 0.45
SMARCD3-202ENST00000356800 KCNC1P48547 511 aa17.88■□□□□ 0.45
SMARCD3-202ENST00000356800 ZXDAP98168 799 aa17.88■□□□□ 0.45
SMARCD3-202ENST00000356800 ACAP2Q15057 778 aa17.88■□□□□ 0.45
SMARCD3-202ENST00000356800 CHI3L2Q15782 390 aa17.88■□□□□ 0.45
SMARCD3-202ENST00000356800 CES4AQ5XG92 561 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms