RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 UGT2B4P06133 528 aa9.29□□□□□ -0.92
SMG6-202ENST00000354901 ZNF865P0CJ78 1059 aaPredicted RBP9.29□□□□□ -0.92
SMG6-202ENST00000354901 TGM1P22735 817 aa9.29□□□□□ -0.92
SMG6-202ENST00000354901 ARCN1P48444 511 aaKnown RBP9.29□□□□□ -0.92
SMG6-202ENST00000354901 AIF1P55008 147 aa9.29□□□□□ -0.92
SMG6-202ENST00000354901 PPP1R8Q12972 351 aaKnown RBP9.29□□□□□ -0.92
SMG6-202ENST00000354901 RAP1GAP2Q684P5 730 aa9.29□□□□□ -0.92
SMG6-202ENST00000354901 OVOS1Q6IE37 1185 aa9.29□□□□□ -0.92
SMG6-202ENST00000354901 FKBP9P1Q75LS8 142 aa9.29□□□□□ -0.92
SMG6-202ENST00000354901 CIR1Q86X95 450 aaPredicted RBP9.29□□□□□ -0.92
SMG6-202ENST00000354901 METTL23Q86XA0 190 aa9.29□□□□□ -0.92
SMG6-202ENST00000354901 TMEM86AQ8N2M4 240 aa9.29□□□□□ -0.92
SMG6-202ENST00000354901 OR52K2Q8NGK3 314 aa9.29□□□□□ -0.92
SMG6-202ENST00000354901 BRSK1Q8TDC3 778 aa9.29□□□□□ -0.92
SMG6-202ENST00000354901 HCAR2Q8TDS4 363 aa9.29□□□□□ -0.92
SMG6-202ENST00000354901 RAB2BQ8WUD1 216 aa9.29□□□□□ -0.92
SMG6-202ENST00000354901 ANKRD49Q8WVL7 239 aa9.29□□□□□ -0.92
SMG6-202ENST00000354901 SLCO4A1Q96BD0 722 aa9.29□□□□□ -0.92
SMG6-202ENST00000354901 MRGPRX2Q96LB1 330 aa9.29□□□□□ -0.92
SMG6-202ENST00000354901 RMND5AQ9H871 391 aa9.29□□□□□ -0.92
SMG6-202ENST00000354901 NMUR1Q9HB89 426 aa9.29□□□□□ -0.92
SMG6-202ENST00000354901 NSMCE4AQ9NXX6 385 aa9.29□□□□□ -0.92
SMG6-202ENST00000354901 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.29□□□□□ -0.92
SMG6-202ENST00000354901 PTGDR2Q9Y5Y4 395 aa9.29□□□□□ -0.92
SMG6-202ENST00000354901 PTCH2Q9Y6C5 1203 aa9.29□□□□□ -0.92
SMG6-202ENST00000354901 TARM1B6A8C7 271 aa9.29□□□□□ -0.92
SMG6-202ENST00000354901 ODC1P11926 461 aa9.29□□□□□ -0.92
SMG6-202ENST00000354901 PCNAP12004 261 aa9.29□□□□□ -0.92
SMG6-202ENST00000354901 PAMP19021 973 aa9.29□□□□□ -0.92
SMG6-202ENST00000354901 CCR1P32246 355 aa9.29□□□□□ -0.92
SMG6-202ENST00000354901 HTR2BP41595 481 aa9.29□□□□□ -0.92
SMG6-202ENST00000354901 CASP3P42574 277 aa9.29□□□□□ -0.92
SMG6-202ENST00000354901 GEMP55040 296 aa9.29□□□□□ -0.92
SMG6-202ENST00000354901 POU6F2P78424 691 aaPredicted RBP9.29□□□□□ -0.92
SMG6-202ENST00000354901 MRPS6P82932 125 aaKnown RBP9.29□□□□□ -0.92
SMG6-202ENST00000354901 DSC2Q02487 901 aa9.29□□□□□ -0.92
SMG6-202ENST00000354901 MAP2K5Q13163 448 aa9.29□□□□□ -0.92
SMG6-202ENST00000354901 FASTKQ14296 549 aaKnown RBP9.29□□□□□ -0.92
SMG6-202ENST00000354901 PON2Q15165 354 aa9.29□□□□□ -0.92
SMG6-202ENST00000354901 FAM83EQ2M2I3 478 aa9.29□□□□□ -0.92
SMG6-202ENST00000354901 GPR158Q5T848 1215 aa9.29□□□□□ -0.92
SMG6-202ENST00000354901 KIAA0408Q6ZU52 694 aa9.29□□□□□ -0.92
SMG6-202ENST00000354901 MIB1Q86YT6 1006 aa9.29□□□□□ -0.92
SMG6-202ENST00000354901 CCDC28AQ8IWP9 274 aa9.29□□□□□ -0.92
SMG6-202ENST00000354901 OR5H6Q8NGV6 325 aa9.29□□□□□ -0.92
SMG6-202ENST00000354901 FCRL5Q96RD9 977 aa9.29□□□□□ -0.92
SMG6-202ENST00000354901 MCMBPQ9BTE3 642 aa9.29□□□□□ -0.92
SMG6-202ENST00000354901 SCUBE2Q9NQ36 999 aa9.29□□□□□ -0.92
SMG6-202ENST00000354901 TOR4AQ9NXH8 423 aa9.29□□□□□ -0.92
SMG6-202ENST00000354901 SNX5Q9Y5X3 404 aa9.29□□□□□ -0.92
SMG6-202ENST00000354901 LRRC14BA6NHZ5 514 aa9.29□□□□□ -0.92
SMG6-202ENST00000354901 CENPXA8MT69 81 aa9.29□□□□□ -0.92
SMG6-202ENST00000354901 DYRK3O43781 588 aa9.29□□□□□ -0.92
SMG6-202ENST00000354901 TBX18O95935 607 aa9.29□□□□□ -0.92
SMG6-202ENST00000354901 C8BP07358 591 aa9.29□□□□□ -0.92
SMG6-202ENST00000354901 ATP5F1P24539 256 aaPredicted RBP9.29□□□□□ -0.92
SMG6-202ENST00000354901 CCNCP24863 283 aa9.29□□□□□ -0.92
SMG6-202ENST00000354901 GPR15P49685 360 aa9.29□□□□□ -0.92
SMG6-202ENST00000354901 RHDQ02161 417 aa9.29□□□□□ -0.92
SMG6-202ENST00000354901 SLC10A7Q0GE19 358 aa9.29□□□□□ -0.92
SMG6-202ENST00000354901 CAPRIN1Q14444 709 aaKnown RBP9.29□□□□□ -0.92
SMG6-202ENST00000354901 DDR2Q16832 855 aa9.29□□□□□ -0.92
SMG6-202ENST00000354901 INTS6LQ5JSJ4 861 aaKnown RBP9.29□□□□□ -0.92
SMG6-202ENST00000354901 CATSPEREQ5SY80 951 aa9.29□□□□□ -0.92
SMG6-202ENST00000354901 CUZD1Q86UP6 607 aa9.29□□□□□ -0.92
SMG6-202ENST00000354901 CLEC4FQ8N1N0 589 aa9.29□□□□□ -0.92
SMG6-202ENST00000354901 RDH11Q8TC12 318 aa9.29□□□□□ -0.92
SMG6-202ENST00000354901 SOCS4Q8WXH5 440 aa9.29□□□□□ -0.92
SMG6-202ENST00000354901 HDAC10Q969S8 669 aa9.29□□□□□ -0.92
SMG6-202ENST00000354901 PGAP3Q96FM1 320 aaPredicted RBP9.29□□□□□ -0.92
SMG6-202ENST00000354901 MUS81Q96NY9 551 aa9.29□□□□□ -0.92
SMG6-202ENST00000354901 MOV10Q9HCE1 1003 aaKnown RBP9.29□□□□□ -0.92
SMG6-202ENST00000354901 VTI1BQ9UEU0 232 aa9.29□□□□□ -0.92
SMG6-202ENST00000354901 RAD54BQ9Y620 910 aa9.29□□□□□ -0.92
SMG6-202ENST00000354901 RALGAPA2Q2PPJ7 1873 aa9.29□□□□□ -0.92
SMG6-202ENST00000354901 PDCD11Q14690 1871 aaKnown RBP9.28□□□□□ -0.92
SMG6-202ENST00000354901 A0A1W2PQH9 124 aa9.28□□□□□ -0.92
SMG6-202ENST00000354901 A8MT66 165 aa9.28□□□□□ -0.92
SMG6-202ENST00000354901 PPP6CO00743 305 aa9.28□□□□□ -0.92
SMG6-202ENST00000354901 UBDO15205 165 aa9.28□□□□□ -0.92
SMG6-202ENST00000354901 MATN3O15232 486 aa9.28□□□□□ -0.92
SMG6-202ENST00000354901 CPNE3O75131 537 aaKnown RBP9.28□□□□□ -0.92
SMG6-202ENST00000354901 INMTO95050 263 aa9.28□□□□□ -0.92
SMG6-202ENST00000354901 MTHFD1P11586 935 aaKnown RBP9.28□□□□□ -0.92
SMG6-202ENST00000354901 NCK1P16333 377 aa9.28□□□□□ -0.92
SMG6-202ENST00000354901 ATP6V1B2P21281 511 aa9.28□□□□□ -0.92
SMG6-202ENST00000354901 PSMB9P28065 219 aa9.28□□□□□ -0.92
SMG6-202ENST00000354901 ARSDP51689 593 aa9.28□□□□□ -0.92
SMG6-202ENST00000354901 HUNKP57058 714 aa9.28□□□□□ -0.92
SMG6-202ENST00000354901 SREBF2Q12772 1141 aa9.28□□□□□ -0.92
SMG6-202ENST00000354901 HERC3Q15034 1050 aa9.28□□□□□ -0.92
SMG6-202ENST00000354901 UPP1Q16831 310 aa9.28□□□□□ -0.92
SMG6-202ENST00000354901 BROXQ5VW32 411 aa9.28□□□□□ -0.92
SMG6-202ENST00000354901 SPATA2LQ8IUW3 424 aaPredicted RBP9.28□□□□□ -0.92
SMG6-202ENST00000354901 SCML4Q8N228 414 aa9.28□□□□□ -0.92
SMG6-202ENST00000354901 C7orf57Q8NEG2 295 aa9.28□□□□□ -0.92
SMG6-202ENST00000354901 FAM83FQ8NEG4 500 aaPredicted RBP9.28□□□□□ -0.92
SMG6-202ENST00000354901 BIRC7Q96CA5 298 aa9.28□□□□□ -0.92
SMG6-202ENST00000354901 MRPL57Q9BQC6 102 aaKnown RBP9.28□□□□□ -0.92
SMG6-202ENST00000354901 PSD2Q9BQI7 771 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms