RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 ATP6AP1LQ52LC2 224 aa21.99■■□□□ 1.11
NKX2-1-201ENST00000354822 SPOUT1Q5T280 376 aaKnown RBP21.99■■□□□ 1.11
NKX2-1-201ENST00000354822 LYPLAL1Q5VWZ2 237 aa21.99■■□□□ 1.11
NKX2-1-201ENST00000354822 PTRHD1Q6GMV3 140 aaKnown RBP21.99■■□□□ 1.11
NKX2-1-201ENST00000354822 ERMP1Q7Z2K6 904 aa21.99■■□□□ 1.11
NKX2-1-201ENST00000354822 TMEM150AQ86TG1 271 aa21.99■■□□□ 1.11
NKX2-1-201ENST00000354822 NCSTNQ92542 709 aa21.99■■□□□ 1.11
NKX2-1-201ENST00000354822 TOX2Q96NM4 488 aa21.99■■□□□ 1.11
NKX2-1-201ENST00000354822 NOL11Q9H8H0 719 aaKnown RBP21.99■■□□□ 1.11
NKX2-1-201ENST00000354822 APPL1Q9UKG1 709 aa21.99■■□□□ 1.11
NKX2-1-201ENST00000354822 MAFFQ9ULX9 164 aa21.99■■□□□ 1.11
NKX2-1-201ENST00000354822 PADI4Q9UM07 663 aa21.99■■□□□ 1.11
NKX2-1-201ENST00000354822 CCDC154A6NI56 674 aa21.99■■□□□ 1.11
NKX2-1-201ENST00000354822 ZNF839A8K0R7 811 aa21.99■■□□□ 1.11
NKX2-1-201ENST00000354822 OR4F21O95013 312 aa21.99■■□□□ 1.11
NKX2-1-201ENST00000354822 ATP6V1B2P21281 511 aa21.99■■□□□ 1.11
NKX2-1-201ENST00000354822 CSNK1DP48730 415 aa21.99■■□□□ 1.11
NKX2-1-201ENST00000354822 POLR2JP52435 117 aaKnown RBP21.99■■□□□ 1.11
NKX2-1-201ENST00000354822 NRF1Q16656 503 aa21.99■■□□□ 1.11
NKX2-1-201ENST00000354822 ATXN7L2Q5T6C5 722 aaPredicted RBP21.99■■□□□ 1.11
NKX2-1-201ENST00000354822 Q6ZNB5 142 aa21.99■■□□□ 1.11
NKX2-1-201ENST00000354822 ITIH5Q86UX2 942 aa21.99■■□□□ 1.11
NKX2-1-201ENST00000354822 TCEAL8Q8IYN2 117 aa21.99■■□□□ 1.11
NKX2-1-201ENST00000354822 RBFAQ8N0V3 343 aa21.99■■□□□ 1.11
NKX2-1-201ENST00000354822 GRIN3AQ8TCU5 1115 aa21.99■■□□□ 1.11
NKX2-1-201ENST00000354822 DDI1Q8WTU0 396 aa21.99■■□□□ 1.11
NKX2-1-201ENST00000354822 ACDQ96AP0 544 aa21.99■■□□□ 1.11
NKX2-1-201ENST00000354822 EID2BQ96D98 161 aa21.99■■□□□ 1.11
NKX2-1-201ENST00000354822 HERC2P3Q9BVR0 1158 aa21.99■■□□□ 1.11
NKX2-1-201ENST00000354822 ZFYVE1Q9HBF4 777 aa21.99■■□□□ 1.11
NKX2-1-201ENST00000354822 GNPTGQ9UJJ9 305 aa21.99■■□□□ 1.11
NKX2-1-201ENST00000354822 DHRS12A0PJE2 317 aa21.98■■□□□ 1.11
NKX2-1-201ENST00000354822 FAM234BA2RU67 622 aa21.98■■□□□ 1.11
NKX2-1-201ENST00000354822 GRXCR2A6NFK2 248 aa21.98■■□□□ 1.11
NKX2-1-201ENST00000354822 PSMA4P25789 261 aaKnown RBP21.98■■□□□ 1.11
NKX2-1-201ENST00000354822 RGS4P49798 205 aa21.98■■□□□ 1.11
NKX2-1-201ENST00000354822 TXNL4AP83876 142 aaKnown RBP21.98■■□□□ 1.11
NKX2-1-201ENST00000354822 BCL2L1Q07817 233 aa21.98■■□□□ 1.11
NKX2-1-201ENST00000354822 CAPRIN1Q14444 709 aaKnown RBP21.98■■□□□ 1.11
NKX2-1-201ENST00000354822 ADRM1Q16186 407 aa21.98■■□□□ 1.11
NKX2-1-201ENST00000354822 TRIM60Q495X7 471 aa21.98■■□□□ 1.11
NKX2-1-201ENST00000354822 MTX3Q5HYI7 312 aa21.98■■□□□ 1.11
NKX2-1-201ENST00000354822 C6orf136Q5SQH8 315 aa21.98■■□□□ 1.11
NKX2-1-201ENST00000354822 THEMIS2Q5TEJ8 643 aa21.98■■□□□ 1.11
NKX2-1-201ENST00000354822 PPP4R4Q6NUP7 873 aa21.98■■□□□ 1.11
NKX2-1-201ENST00000354822 CNKSR3Q6P9H4 555 aa21.98■■□□□ 1.11
NKX2-1-201ENST00000354822 METTL3Q86U44 580 aaKnown RBP21.98■■□□□ 1.11
NKX2-1-201ENST00000354822 HOMEZQ8IX15 550 aa21.98■■□□□ 1.11
NKX2-1-201ENST00000354822 FAM217AQ8IXS0 508 aa21.98■■□□□ 1.11
NKX2-1-201ENST00000354822 TMEM199Q8N511 208 aa21.98■■□□□ 1.11
NKX2-1-201ENST00000354822 PACRGLQ8N7B6 248 aa21.98■■□□□ 1.11
NKX2-1-201ENST00000354822 ZNF558Q96NG5 402 aa21.98■■□□□ 1.11
NKX2-1-201ENST00000354822 ANAPC1Q9H1A4 1944 aa21.98■■□□□ 1.11
NKX2-1-201ENST00000354822 C7orf72A4D263 438 aa21.98■■□□□ 1.11
NKX2-1-201ENST00000354822 IQCF5A8MTL0 148 aa21.98■■□□□ 1.11
NKX2-1-201ENST00000354822 RAD51BO15315 384 aa21.98■■□□□ 1.11
NKX2-1-201ENST00000354822 AKAP10O43572 662 aa21.98■■□□□ 1.11
NKX2-1-201ENST00000354822 SYNCRIPO60506 623 aaKnown RBP21.98■■□□□ 1.11
NKX2-1-201ENST00000354822 GREM1O60565 184 aa21.98■■□□□ 1.11
NKX2-1-201ENST00000354822 CTPS1P17812 591 aa21.98■■□□□ 1.11
NKX2-1-201ENST00000354822 ERVPABLB-1P60509 514 aa21.98■■□□□ 1.11
NKX2-1-201ENST00000354822 HTRA3P83110 453 aa21.98■■□□□ 1.11
NKX2-1-201ENST00000354822 MYBPC1Q00872 1141 aa21.98■■□□□ 1.11
NKX2-1-201ENST00000354822 HMBOX1Q6NT76 420 aa21.98■■□□□ 1.11
NKX2-1-201ENST00000354822 ZBTB49Q6ZSB9 765 aa21.98■■□□□ 1.11
NKX2-1-201ENST00000354822 SNX20Q7Z614 316 aa21.98■■□□□ 1.11
NKX2-1-201ENST00000354822 AMIGO2Q86SJ2 522 aa21.98■■□□□ 1.11
NKX2-1-201ENST00000354822 SERPINA9Q86WD7 417 aa21.98■■□□□ 1.11
NKX2-1-201ENST00000354822 CDYL2Q8N8U2 506 aa21.98■■□□□ 1.11
NKX2-1-201ENST00000354822 METTL6Q8TCB7 284 aa21.98■■□□□ 1.11
NKX2-1-201ENST00000354822 ESAMQ96AP7 390 aa21.98■■□□□ 1.11
NKX2-1-201ENST00000354822 TMEM125Q96AQ2 219 aa21.98■■□□□ 1.11
NKX2-1-201ENST00000354822 SLC45A3Q96JT2 553 aa21.98■■□□□ 1.11
NKX2-1-201ENST00000354822 PLEKHG4BQ96PX9 1271 aa21.98■■□□□ 1.11
NKX2-1-201ENST00000354822 ACOX2Q99424 681 aa21.98■■□□□ 1.11
NKX2-1-201ENST00000354822 TRIM4Q9C037 500 aa21.98■■□□□ 1.11
NKX2-1-201ENST00000354822 LSM7Q9UK45 103 aaKnown RBP21.98■■□□□ 1.11
NKX2-1-201ENST00000354822 COMMD3-BMI1R4GMX3 469 aa21.98■■□□□ 1.11
NKX2-1-201ENST00000354822 KANSL1LA0AUZ9 987 aa21.97■■□□□ 1.11
NKX2-1-201ENST00000354822 PRAMEF12O95522 483 aa21.97■■□□□ 1.11
NKX2-1-201ENST00000354822 OLFM2O95897 454 aa21.97■■□□□ 1.11
NKX2-1-201ENST00000354822 GPIP06744 558 aa21.97■■□□□ 1.11
NKX2-1-201ENST00000354822 UFM1P61960 85 aa21.97■■□□□ 1.11
NKX2-1-201ENST00000354822 TBCELQ5QJ74 424 aa21.97■■□□□ 1.11
NKX2-1-201ENST00000354822 PRR23BQ6ZRT6 265 aa21.97■■□□□ 1.11
NKX2-1-201ENST00000354822 PTRH1Q86Y79 214 aaKnown RBP21.97■■□□□ 1.11
NKX2-1-201ENST00000354822 CAMK1DQ8IU85 385 aa21.97■■□□□ 1.11
NKX2-1-201ENST00000354822 FNDC5Q8NAU1 212 aa21.97■■□□□ 1.11
NKX2-1-201ENST00000354822 OR2T11Q8NH01 316 aa21.97■■□□□ 1.11
NKX2-1-201ENST00000354822 ADAMTS19Q8TE59 1207 aa21.97■■□□□ 1.11
NKX2-1-201ENST00000354822 CIPCQ9C0C6 399 aa21.97■■□□□ 1.11
NKX2-1-201ENST00000354822 HTRA2O43464 458 aaPredicted RBP21.97■■□□□ 1.11
NKX2-1-201ENST00000354822 SOCS5O75159 536 aa21.97■■□□□ 1.11
NKX2-1-201ENST00000354822 TIPRLO75663 272 aa21.97■■□□□ 1.11
NKX2-1-201ENST00000354822 PRAMEF1O95521 474 aa21.97■■□□□ 1.11
NKX2-1-201ENST00000354822 ITGALP20701 1170 aa21.97■■□□□ 1.11
NKX2-1-201ENST00000354822 DGKAP23743 735 aa21.97■■□□□ 1.11
NKX2-1-201ENST00000354822 ZFP36L2P47974 494 aaKnown RBP21.97■■□□□ 1.11
NKX2-1-201ENST00000354822 EEFSECP57772 596 aaKnown RBP21.97■■□□□ 1.11
NKX2-1-201ENST00000354822 PRKG2Q13237 762 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms