RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 PSAT1Q9Y617 370 aa13.57□□□□□ -0.24
SMC6-201ENST00000351948 SAP18O00422 153 aaKnown RBP13.56□□□□□ -0.24
SMC6-201ENST00000351948 OR1F1O43749 312 aa13.56□□□□□ -0.24
SMC6-201ENST00000351948 CDH3P22223 829 aa13.56□□□□□ -0.24
SMC6-201ENST00000351948 CLK1P49759 484 aaKnown RBP13.56□□□□□ -0.24
SMC6-201ENST00000351948 RNF43Q68DV7 783 aa13.56□□□□□ -0.24
SMC6-201ENST00000351948 IRGCQ6NXR0 463 aa13.56□□□□□ -0.24
SMC6-201ENST00000351948 AMZ2Q86W34 360 aa13.56□□□□□ -0.24
SMC6-201ENST00000351948 SCAMP4Q969E2 229 aa13.56□□□□□ -0.24
SMC6-201ENST00000351948 AIF1LQ9BQI0 150 aa13.56□□□□□ -0.24
SMC6-201ENST00000351948 LRTM1Q9HBL6 345 aa13.56□□□□□ -0.24
SMC6-201ENST00000351948 B4GALT6Q9UBX8 382 aa13.56□□□□□ -0.24
SMC6-201ENST00000351948 ADAM12O43184 909 aa13.56□□□□□ -0.24
SMC6-201ENST00000351948 PEX1O43933 1283 aa13.56□□□□□ -0.24
SMC6-201ENST00000351948 CFIP05156 583 aa13.56□□□□□ -0.24
SMC6-201ENST00000351948 UMPSP11172 480 aa13.56□□□□□ -0.24
SMC6-201ENST00000351948 NOS3P29474 1203 aa13.56□□□□□ -0.24
SMC6-201ENST00000351948 AMZ1Q400G9 498 aa13.56□□□□□ -0.24
SMC6-201ENST00000351948 IL23RQ5VWK5 629 aa13.56□□□□□ -0.24
SMC6-201ENST00000351948 TMEM26Q6ZUK4 368 aa13.56□□□□□ -0.24
SMC6-201ENST00000351948 RPS27LQ71UM5 84 aaKnown RBP13.56□□□□□ -0.24
SMC6-201ENST00000351948 ANKRD46Q86W74 232 aa13.56□□□□□ -0.24
SMC6-201ENST00000351948 TCF12Q99081 682 aa13.56□□□□□ -0.24
SMC6-201ENST00000351948 SH3GL2Q99962 352 aa13.56□□□□□ -0.24
SMC6-201ENST00000351948 HERPUD2Q9BSE4 406 aa13.56□□□□□ -0.24
SMC6-201ENST00000351948 RIBC2Q9H4K1 309 aa13.56□□□□□ -0.24
SMC6-201ENST00000351948 ZNF395Q9H8N7 513 aaPredicted RBP13.56□□□□□ -0.24
SMC6-201ENST00000351948 CCDC177Q9NQR7 707 aaPredicted RBP13.56□□□□□ -0.24
SMC6-201ENST00000351948 COL22A1Q8NFW1 1626 aaPredicted RBP13.56□□□□□ -0.24
SMC6-201ENST00000351948 CLDN9O95484 217 aa13.56□□□□□ -0.24
SMC6-201ENST00000351948 TRBC1P01850 177 aa13.56□□□□□ -0.24
SMC6-201ENST00000351948 ZNF8P17098 575 aaPredicted RBP13.56□□□□□ -0.24
SMC6-201ENST00000351948 VPS26BQ4G0F5 336 aa13.56□□□□□ -0.24
SMC6-201ENST00000351948 DPY19L3Q6ZPD9 716 aa13.56□□□□□ -0.24
SMC6-201ENST00000351948 CHSY3Q70JA7 882 aa13.56□□□□□ -0.24
SMC6-201ENST00000351948 NPWQ8N729 165 aa13.56□□□□□ -0.24
SMC6-201ENST00000351948 BANPQ8N9N5 519 aa13.56□□□□□ -0.24
SMC6-201ENST00000351948 OLFM3Q96PB7 478 aa13.56□□□□□ -0.24
SMC6-201ENST00000351948 TRMOQ9BU70 441 aa13.56□□□□□ -0.24
SMC6-201ENST00000351948 TRIT1Q9H3H1 467 aaKnown RBP13.56□□□□□ -0.24
SMC6-201ENST00000351948 MYH8P13535 1937 aa13.56□□□□□ -0.24
SMC6-201ENST00000351948 HEPACAM2A8MVW5 462 aa13.56□□□□□ -0.24
SMC6-201ENST00000351948 HSMCR30P0CW71 290 aa13.56□□□□□ -0.24
SMC6-201ENST00000351948 NR2F1P10589 423 aa13.56□□□□□ -0.24
SMC6-201ENST00000351948 PLA2G16P53816 162 aa13.56□□□□□ -0.24
SMC6-201ENST00000351948 RALGDSQ12967 914 aa13.56□□□□□ -0.24
SMC6-201ENST00000351948 PPCDCQ96CD2 204 aa13.56□□□□□ -0.24
SMC6-201ENST00000351948 THAP11Q96EK4 314 aa13.56□□□□□ -0.24
SMC6-201ENST00000351948 GABRDO14764 452 aa13.55□□□□□ -0.24
SMC6-201ENST00000351948 LEFTY1O75610 366 aa13.55□□□□□ -0.24
SMC6-201ENST00000351948 DLDP09622 509 aaKnown RBP13.55□□□□□ -0.24
SMC6-201ENST00000351948 OGNP20774 298 aaKnown RBP13.55□□□□□ -0.24
SMC6-201ENST00000351948 MANFP55145 182 aaKnown RBP13.55□□□□□ -0.24
SMC6-201ENST00000351948 LCP2Q13094 533 aa13.55□□□□□ -0.24
SMC6-201ENST00000351948 CCNYL2Q5T2Q4 361 aa13.55□□□□□ -0.24
SMC6-201ENST00000351948 PLD3Q8IV08 490 aa13.55□□□□□ -0.24
SMC6-201ENST00000351948 CLPTM1LQ96KA5 538 aa13.55□□□□□ -0.24
SMC6-201ENST00000351948 CASD1Q96PB1 797 aa13.55□□□□□ -0.24
SMC6-201ENST00000351948 SLC24A3Q9HC58 644 aa13.55□□□□□ -0.24
SMC6-201ENST00000351948 DNAJC28Q9NX36 388 aa13.55□□□□□ -0.24
SMC6-201ENST00000351948 MAP10Q9P2G4 905 aa13.55□□□□□ -0.24
SMC6-201ENST00000351948 MYH10P35580 1976 aa13.55□□□□□ -0.24
SMC6-201ENST00000351948 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.55□□□□□ -0.24
SMC6-201ENST00000351948 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.55□□□□□ -0.24
SMC6-201ENST00000351948 DEAF1O75398 565 aaPredicted RBP13.55□□□□□ -0.24
SMC6-201ENST00000351948 IDO1P14902 403 aa13.55□□□□□ -0.24
SMC6-201ENST00000351948 IRAK1BP1Q5VVH5 260 aa13.55□□□□□ -0.24
SMC6-201ENST00000351948 PRR23BQ6ZRT6 265 aa13.55□□□□□ -0.24
SMC6-201ENST00000351948 RALGPS2Q86X27 583 aaPredicted RBP13.55□□□□□ -0.24
SMC6-201ENST00000351948 STARD8Q92502 1023 aa13.55□□□□□ -0.24
SMC6-201ENST00000351948 BDH2Q9BUT1 245 aa13.55□□□□□ -0.24
SMC6-201ENST00000351948 SPAG4Q9NPE6 437 aa13.55□□□□□ -0.24
SMC6-201ENST00000351948 LGALS13Q9UHV8 139 aa13.55□□□□□ -0.24
SMC6-201ENST00000351948 KCNK6Q9Y257 313 aa13.55□□□□□ -0.24
SMC6-201ENST00000351948 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.55□□□□□ -0.24
SMC6-201ENST00000351948 M0QZQ0 153 aa13.55□□□□□ -0.24
SMC6-201ENST00000351948 C16orf62Q7Z3J2 963 aa13.55□□□□□ -0.24
SMC6-201ENST00000351948 RPAINQ86UA6 219 aa13.55□□□□□ -0.24
SMC6-201ENST00000351948 TMEM25Q86YD3 366 aa13.55□□□□□ -0.24
SMC6-201ENST00000351948 GPR135Q8IZ08 494 aa13.55□□□□□ -0.24
SMC6-201ENST00000351948 DSELQ8IZU8 1212 aa13.55□□□□□ -0.24
SMC6-201ENST00000351948 ACTRT2Q8TDY3 377 aa13.55□□□□□ -0.24
SMC6-201ENST00000351948 EXOSC8Q96B26 276 aaKnown RBP13.55□□□□□ -0.24
SMC6-201ENST00000351948 LINC00597Q9H2U6 94 aa13.55□□□□□ -0.24
SMC6-201ENST00000351948 MTG2Q9H4K7 406 aa13.55□□□□□ -0.24
SMC6-201ENST00000351948 SCN7AQ01118 1682 aa13.55□□□□□ -0.24
SMC6-201ENST00000351948 C15orf38-AP3S2A0A0A6YYH1 394 aa13.55□□□□□ -0.24
SMC6-201ENST00000351948 FAM220BPB1ANY3 271 aa13.55□□□□□ -0.24
SMC6-201ENST00000351948 ENO2P09104 434 aaPredicted RBP13.55□□□□□ -0.24
SMC6-201ENST00000351948 AKT2P31751 481 aa13.55□□□□□ -0.24
SMC6-201ENST00000351948 DHPSP49366 369 aaPredicted RBP13.55□□□□□ -0.24
SMC6-201ENST00000351948 ITPRIPL2Q3MIP1 535 aa13.55□□□□□ -0.24
SMC6-201ENST00000351948 ARPINQ7Z6K5 226 aa13.55□□□□□ -0.24
SMC6-201ENST00000351948 ZNF276Q8N554 614 aa13.55□□□□□ -0.24
SMC6-201ENST00000351948 PNPLA1Q8N8W4 532 aa13.55□□□□□ -0.24
SMC6-201ENST00000351948 USE1Q9NZ43 259 aa13.55□□□□□ -0.24
SMC6-201ENST00000351948 hCG_2014768A0A024R1R8 64 aa13.54□□□□□ -0.24
SMC6-201ENST00000351948 UPK3BL1B0FP48 263 aa13.54□□□□□ -0.24
SMC6-201ENST00000351948 UPK3BL2E5RIL1 263 aa13.54□□□□□ -0.24
SMC6-201ENST00000351948 PIP5K1BO14986 540 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms