RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 NQO1P15559 274 aaKnown RBP16.23■□□□□ 0.19
SMARCA4-201ENST00000344626 FASP25445 335 aa16.23■□□□□ 0.19
SMARCA4-201ENST00000344626 NOS3P29474 1203 aa16.23■□□□□ 0.19
SMARCA4-201ENST00000344626 SERPINB3P29508 390 aa16.23■□□□□ 0.19
SMARCA4-201ENST00000344626 BUD31P41223 144 aaPredicted RBP16.23■□□□□ 0.19
SMARCA4-201ENST00000344626 PDK4Q16654 411 aa16.23■□□□□ 0.19
SMARCA4-201ENST00000344626 TRMT5Q32P41 509 aaKnown RBP16.23■□□□□ 0.19
SMARCA4-201ENST00000344626 MED27Q6P2C8 311 aa16.23■□□□□ 0.19
SMARCA4-201ENST00000344626 BTN2A2Q8WVV5 523 aa16.23■□□□□ 0.19
SMARCA4-201ENST00000344626 ROGDIQ9GZN7 287 aa16.23■□□□□ 0.19
SMARCA4-201ENST00000344626 UBE2ZQ9H832 354 aaPredicted RBP16.23■□□□□ 0.19
SMARCA4-201ENST00000344626 PCDHGB3Q9Y5G1 929 aa16.23■□□□□ 0.19
SMARCA4-201ENST00000344626 TJP1Q07157 1748 aa16.23■□□□□ 0.19
SMARCA4-201ENST00000344626 APC2O95996 2303 aa16.23■□□□□ 0.19
SMARCA4-201ENST00000344626 PI15O43692 258 aa16.23■□□□□ 0.19
SMARCA4-201ENST00000344626 IMPDH2P12268 514 aa16.23■□□□□ 0.19
SMARCA4-201ENST00000344626 FGFR3P22607 806 aa16.23■□□□□ 0.19
SMARCA4-201ENST00000344626 FECHP22830 423 aa16.23■□□□□ 0.19
SMARCA4-201ENST00000344626 CSTF2P33240 577 aaKnown RBP eCLIP16.23■□□□□ 0.19
SMARCA4-201ENST00000344626 ALKBH2Q6NS38 261 aa16.23■□□□□ 0.19
SMARCA4-201ENST00000344626 ZNF549Q6P9A3 640 aa16.23■□□□□ 0.19
SMARCA4-201ENST00000344626 TMEM26Q6ZUK4 368 aa16.23■□□□□ 0.19
SMARCA4-201ENST00000344626 TRABD2AQ86V40 505 aa16.23■□□□□ 0.19
SMARCA4-201ENST00000344626 C10orf107Q8IVU9 208 aa16.23■□□□□ 0.19
SMARCA4-201ENST00000344626 ATOH1Q92858 354 aaPredicted RBP16.23■□□□□ 0.19
SMARCA4-201ENST00000344626 BORCS6Q96GS4 357 aa16.23■□□□□ 0.19
SMARCA4-201ENST00000344626 HSD3B7Q9H2F3 369 aa16.23■□□□□ 0.19
SMARCA4-201ENST00000344626 MMADHCQ9H3L0 296 aaPredicted RBP16.23■□□□□ 0.19
SMARCA4-201ENST00000344626 SAR1AQ9NR31 198 aa16.23■□□□□ 0.19
SMARCA4-201ENST00000344626 SALL4Q9UJQ4 1053 aa16.23■□□□□ 0.19
SMARCA4-201ENST00000344626 H3BNH8 94 aa16.22■□□□□ 0.19
SMARCA4-201ENST00000344626 SNRPB2P08579 225 aaKnown RBP16.22■□□□□ 0.19
SMARCA4-201ENST00000344626 JAK1P23458 1154 aa16.22■□□□□ 0.19
SMARCA4-201ENST00000344626 IRS1P35568 1242 aa16.22■□□□□ 0.19
SMARCA4-201ENST00000344626 STXBP1P61764 594 aaKnown RBP16.22■□□□□ 0.19
SMARCA4-201ENST00000344626 BST1Q10588 318 aa16.22■□□□□ 0.19
SMARCA4-201ENST00000344626 LMAN2Q12907 356 aa16.22■□□□□ 0.19
SMARCA4-201ENST00000344626 LRRTM4Q86VH4 590 aa16.22■□□□□ 0.19
SMARCA4-201ENST00000344626 NRAPQ86VF7 1730 aa16.22■□□□□ 0.19
SMARCA4-201ENST00000344626 ZNF487B1APH4 448 aa16.22■□□□□ 0.19
SMARCA4-201ENST00000344626 ZNF132P52740 706 aa16.22■□□□□ 0.19
SMARCA4-201ENST00000344626 GALNT2Q10471 571 aa16.22■□□□□ 0.19
SMARCA4-201ENST00000344626 GKN2Q86XP6 184 aa16.22■□□□□ 0.19
SMARCA4-201ENST00000344626 EID3Q8N140 333 aa16.22■□□□□ 0.19
SMARCA4-201ENST00000344626 TRAF6Q9Y4K3 522 aa16.22■□□□□ 0.19
SMARCA4-201ENST00000344626 ARL5AQ9Y689 179 aa16.22■□□□□ 0.19
SMARCA4-201ENST00000344626 RECQL5O94762 991 aaPredicted RBP16.22■□□□□ 0.19
SMARCA4-201ENST00000344626 ME2P23368 584 aa16.22■□□□□ 0.19
SMARCA4-201ENST00000344626 ASMTP46597 345 aa16.22■□□□□ 0.19
SMARCA4-201ENST00000344626 TRIM40Q6P9F5 258 aa16.22■□□□□ 0.19
SMARCA4-201ENST00000344626 RAB7BQ96AH8 199 aa16.22■□□□□ 0.19
SMARCA4-201ENST00000344626 ITCHQ96J02 903 aa16.22■□□□□ 0.19
SMARCA4-201ENST00000344626 ZNF641Q96N77 438 aaPredicted RBP16.22■□□□□ 0.19
SMARCA4-201ENST00000344626 SLC2A13Q96QE2 648 aa16.22■□□□□ 0.19
SMARCA4-201ENST00000344626 HHIPQ96QV1 700 aa16.22■□□□□ 0.19
SMARCA4-201ENST00000344626 ANKRD36CQ5JPF3 1778 aa16.22■□□□□ 0.19
SMARCA4-201ENST00000344626 A0A0D9SEW6 157 aa16.22■□□□□ 0.19
SMARCA4-201ENST00000344626 ADAM12O43184 909 aa16.22■□□□□ 0.19
SMARCA4-201ENST00000344626 HNRNPLP14866 589 aaKnown RBP eCLIP16.22■□□□□ 0.19
SMARCA4-201ENST00000344626 TSPAN8P19075 237 aa16.22■□□□□ 0.19
SMARCA4-201ENST00000344626 VARSP26640 1264 aaKnown RBP16.22■□□□□ 0.19
SMARCA4-201ENST00000344626 CYP1B1Q16678 543 aa16.22■□□□□ 0.19
SMARCA4-201ENST00000344626 CCNYL2Q5T2Q4 361 aa16.22■□□□□ 0.19
SMARCA4-201ENST00000344626 CUZD1Q86UP6 607 aa16.22■□□□□ 0.19
SMARCA4-201ENST00000344626 FOXJ1Q92949 421 aa16.22■□□□□ 0.19
SMARCA4-201ENST00000344626 POP5Q969H6 163 aaKnown RBP16.22■□□□□ 0.19
SMARCA4-201ENST00000344626 RSPH9Q9H1X1 276 aaPredicted RBP16.22■□□□□ 0.19
SMARCA4-201ENST00000344626 MTF2Q9Y483 593 aaPredicted RBP16.22■□□□□ 0.19
SMARCA4-201ENST00000344626 TMEM189-UBE2V1I3L0A0 370 aa16.21■□□□□ 0.19
SMARCA4-201ENST00000344626 SERPINI2O75830 405 aa16.21■□□□□ 0.19
SMARCA4-201ENST00000344626 USP46P62068 366 aa16.21■□□□□ 0.19
SMARCA4-201ENST00000344626 ANKRD22Q5VYY1 191 aa16.21■□□□□ 0.19
SMARCA4-201ENST00000344626 TTC27Q6P3X3 843 aa16.21■□□□□ 0.19
SMARCA4-201ENST00000344626 B3GNT9Q6UX72 402 aa16.21■□□□□ 0.19
SMARCA4-201ENST00000344626 GPRIN1Q7Z2K8 1008 aa16.21■□□□□ 0.19
SMARCA4-201ENST00000344626 C3orf58Q8NDZ4 430 aa16.21■□□□□ 0.19
SMARCA4-201ENST00000344626 SLC35B2Q8TB61 432 aa16.21■□□□□ 0.19
SMARCA4-201ENST00000344626 IL1RAPL1Q9NZN1 696 aa16.21■□□□□ 0.19
SMARCA4-201ENST00000344626 ZNF490Q9ULM2 529 aaPredicted RBP16.21■□□□□ 0.19
SMARCA4-201ENST00000344626 NR2F1P10589 423 aa16.21■□□□□ 0.19
SMARCA4-201ENST00000344626 UMPSP11172 480 aa16.21■□□□□ 0.19
SMARCA4-201ENST00000344626 TNK2Q07912 1038 aa16.21■□□□□ 0.19
SMARCA4-201ENST00000344626 NFATC2Q13469 925 aa16.21■□□□□ 0.19
SMARCA4-201ENST00000344626 C1orf61Q13536 156 aa16.21■□□□□ 0.19
SMARCA4-201ENST00000344626 GPAT3Q53EU6 434 aa16.21■□□□□ 0.19
SMARCA4-201ENST00000344626 RASGRP3Q8IV61 690 aa16.21■□□□□ 0.19
SMARCA4-201ENST00000344626 RPLP0P6Q8NHW5 317 aa16.21■□□□□ 0.19
SMARCA4-201ENST00000344626 POLR1BQ9H9Y6 1135 aa16.21■□□□□ 0.19
SMARCA4-201ENST00000344626 MFHAS1Q9Y4C4 1052 aa16.21■□□□□ 0.19
SMARCA4-201ENST00000344626 NTRK1P04629 796 aa16.21■□□□□ 0.19
SMARCA4-201ENST00000344626 LINC00032P0C843 101 aa16.21■□□□□ 0.19
SMARCA4-201ENST00000344626 ZNF8P17098 575 aaPredicted RBP16.21■□□□□ 0.19
SMARCA4-201ENST00000344626 SLC25A11Q02978 314 aaKnown RBP16.21■□□□□ 0.19
SMARCA4-201ENST00000344626 TDGQ13569 410 aa16.21■□□□□ 0.19
SMARCA4-201ENST00000344626 SLC1A5Q15758 541 aa16.21■□□□□ 0.19
SMARCA4-201ENST00000344626 SPATA19Q7Z5L4 167 aa16.21■□□□□ 0.19
SMARCA4-201ENST00000344626 GFM2Q969S9 779 aaKnown RBP16.21■□□□□ 0.19
SMARCA4-201ENST00000344626 CEP44Q9C0F1 390 aa16.21■□□□□ 0.19
SMARCA4-201ENST00000344626 KCNK6Q9Y257 313 aa16.21■□□□□ 0.19
SMARCA4-201ENST00000344626 PDE9AO76083 593 aa16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms