RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 CRABP2P29373 138 aa13.38□□□□□ -0.27
HERPUD1-202ENST00000344114 ARSDP51689 593 aa13.38□□□□□ -0.27
HERPUD1-202ENST00000344114 EPHB1P54762 984 aa13.38□□□□□ -0.27
HERPUD1-202ENST00000344114 RAB10P61026 200 aa13.38□□□□□ -0.27
HERPUD1-202ENST00000344114 BCL2L1Q07817 233 aa13.38□□□□□ -0.27
HERPUD1-202ENST00000344114 USP10Q14694 798 aaKnown RBP13.38□□□□□ -0.27
HERPUD1-202ENST00000344114 RTP5Q14D33 572 aa13.38□□□□□ -0.27
HERPUD1-202ENST00000344114 FNDC3BQ53EP0 1204 aaKnown RBP13.38□□□□□ -0.27
HERPUD1-202ENST00000344114 ATG16L1Q676U5 607 aa13.38□□□□□ -0.27
HERPUD1-202ENST00000344114 LRRC69Q6ZNQ3 347 aa13.38□□□□□ -0.27
HERPUD1-202ENST00000344114 FAM47EQ6ZV65 393 aa13.38□□□□□ -0.27
HERPUD1-202ENST00000344114 AHI1Q8N157 1196 aa13.38□□□□□ -0.27
HERPUD1-202ENST00000344114 OR13C4Q8NGS5 318 aa13.38□□□□□ -0.27
HERPUD1-202ENST00000344114 SNIP1Q8TAD8 396 aaKnown RBP13.38□□□□□ -0.27
HERPUD1-202ENST00000344114 CYB5D2Q8WUJ1 264 aa13.38□□□□□ -0.27
HERPUD1-202ENST00000344114 PDCD6IPQ8WUM4 868 aaKnown RBP13.38□□□□□ -0.27
HERPUD1-202ENST00000344114 TSPAN17Q96FV3 270 aa13.38□□□□□ -0.27
HERPUD1-202ENST00000344114 ELMO2Q96JJ3 720 aa13.38□□□□□ -0.27
HERPUD1-202ENST00000344114 TUBGCP5Q96RT8 1024 aa13.38□□□□□ -0.27
HERPUD1-202ENST00000344114 ELF4Q99607 663 aaPredicted RBP13.38□□□□□ -0.27
HERPUD1-202ENST00000344114 C19orf43Q9BQ61 176 aa13.38□□□□□ -0.27
HERPUD1-202ENST00000344114 NRSN2Q9GZP1 204 aa13.38□□□□□ -0.27
HERPUD1-202ENST00000344114 PRSS16Q9NQE7 514 aa13.38□□□□□ -0.27
HERPUD1-202ENST00000344114 CATSPERZQ9NTU4 200 aa13.38□□□□□ -0.27
HERPUD1-202ENST00000344114 SIRPGQ9P1W8 387 aa13.38□□□□□ -0.27
HERPUD1-202ENST00000344114 TLK1Q9UKI8 766 aa13.38□□□□□ -0.27
HERPUD1-202ENST00000344114 EMCNQ9ULC0 261 aa13.38□□□□□ -0.27
HERPUD1-202ENST00000344114 PLA2G4CQ9UP65 541 aa13.38□□□□□ -0.27
HERPUD1-202ENST00000344114 KCTD3Q9Y597 815 aa13.38□□□□□ -0.27
HERPUD1-202ENST00000344114 SPO11Q9Y5K1 396 aa13.38□□□□□ -0.27
HERPUD1-202ENST00000344114 KALRNO60229 2985 aa13.38□□□□□ -0.27
HERPUD1-202ENST00000344114 A0A1W2PPC4 97 aa13.37□□□□□ -0.27
HERPUD1-202ENST00000344114 WDR91A4D1P6 747 aa13.37□□□□□ -0.27
HERPUD1-202ENST00000344114 C10orf142B7Z368 130 aa13.37□□□□□ -0.27
HERPUD1-202ENST00000344114 K7ERQ8 282 aa13.37□□□□□ -0.27
HERPUD1-202ENST00000344114 HTRA2O43464 458 aaPredicted RBP13.37□□□□□ -0.27
HERPUD1-202ENST00000344114 C2P06681 752 aa13.37□□□□□ -0.27
HERPUD1-202ENST00000344114 STMN1P16949 149 aa13.37□□□□□ -0.27
HERPUD1-202ENST00000344114 SERPINA4P29622 427 aa13.37□□□□□ -0.27
HERPUD1-202ENST00000344114 ACADVLP49748 655 aa13.37□□□□□ -0.27
HERPUD1-202ENST00000344114 KPNA2P52292 529 aaKnown RBP13.37□□□□□ -0.27
HERPUD1-202ENST00000344114 SLC12A2P55011 1212 aa13.37□□□□□ -0.27
HERPUD1-202ENST00000344114 HNRNPH2P55795 449 aaKnown RBP13.37□□□□□ -0.27
HERPUD1-202ENST00000344114 CLDN6P56747 220 aa13.37□□□□□ -0.27
HERPUD1-202ENST00000344114 SHBQ15464 509 aa13.37□□□□□ -0.27
HERPUD1-202ENST00000344114 TTC31Q49AM3 519 aaPredicted RBP13.37□□□□□ -0.27
HERPUD1-202ENST00000344114 KIAA0895LQ68EN5 471 aa13.37□□□□□ -0.27
HERPUD1-202ENST00000344114 CGB2Q6NT52 195 aa13.37□□□□□ -0.27
HERPUD1-202ENST00000344114 FBXL19Q6PCT2 694 aa13.37□□□□□ -0.27
HERPUD1-202ENST00000344114 RAPH1Q70E73 1250 aa13.37□□□□□ -0.27
HERPUD1-202ENST00000344114 PTAR1Q7Z6K3 402 aaPredicted RBP13.37□□□□□ -0.27
HERPUD1-202ENST00000344114 ADIPOR2Q86V24 386 aa13.37□□□□□ -0.27
HERPUD1-202ENST00000344114 GATAD2AQ86YP4 633 aa13.37□□□□□ -0.27
HERPUD1-202ENST00000344114 NUDCD3Q8IVD9 361 aa13.37□□□□□ -0.27
HERPUD1-202ENST00000344114 ZNF843Q8N446 348 aa13.37□□□□□ -0.27
HERPUD1-202ENST00000344114 TTC30BQ8N4P2 665 aa13.37□□□□□ -0.27
HERPUD1-202ENST00000344114 CCDC63Q8NA47 563 aa13.37□□□□□ -0.27
HERPUD1-202ENST00000344114 OR4L1Q8NH43 312 aa13.37□□□□□ -0.27
HERPUD1-202ENST00000344114 CDKN2AIPNLQ96HQ2 116 aa13.37□□□□□ -0.27
HERPUD1-202ENST00000344114 CNDP2Q96KP4 475 aaKnown RBP13.37□□□□□ -0.27
HERPUD1-202ENST00000344114 TBATAQ96M53 351 aa13.37□□□□□ -0.27
HERPUD1-202ENST00000344114 TSSK1BQ9BXA7 367 aa13.37□□□□□ -0.27
HERPUD1-202ENST00000344114 CAB39LQ9H9S4 337 aa13.37□□□□□ -0.27
HERPUD1-202ENST00000344114 MAGEE1Q9HCI5 957 aa13.37□□□□□ -0.27
HERPUD1-202ENST00000344114 FBXO6Q9NRD1 293 aaPredicted RBP13.37□□□□□ -0.27
HERPUD1-202ENST00000344114 INTS10Q9NVR2 710 aaKnown RBP13.37□□□□□ -0.27
HERPUD1-202ENST00000344114 ZNF711Q9Y462 761 aa13.37□□□□□ -0.27
HERPUD1-202ENST00000344114 A0A087X1B8 175 aa13.36□□□□□ -0.27
HERPUD1-202ENST00000344114 A0A1W2PQ67 120 aa13.36□□□□□ -0.27
HERPUD1-202ENST00000344114 CCDC162PA2VCL2 907 aa13.36□□□□□ -0.27
HERPUD1-202ENST00000344114 H7C0S8 307 aa13.36□□□□□ -0.27
HERPUD1-202ENST00000344114 TRAFD1O14545 582 aaPredicted RBP13.36□□□□□ -0.27
HERPUD1-202ENST00000344114 CD3EAPO15446 510 aaKnown RBP13.36□□□□□ -0.27
HERPUD1-202ENST00000344114 RRP8O43159 456 aaKnown RBP13.36□□□□□ -0.27
HERPUD1-202ENST00000344114 HAUS5O94927 633 aa13.36□□□□□ -0.27
HERPUD1-202ENST00000344114 LDOC1O95751 146 aaPredicted RBP13.36□□□□□ -0.27
HERPUD1-202ENST00000344114 WNT1P04628 370 aa13.36□□□□□ -0.27
HERPUD1-202ENST00000344114 F7P08709 466 aaPredicted RBP13.36□□□□□ -0.27
HERPUD1-202ENST00000344114 DLDP09622 509 aaKnown RBP13.36□□□□□ -0.27
HERPUD1-202ENST00000344114 TROVE2P10155 538 aaKnown RBP eCLIP13.36□□□□□ -0.27
HERPUD1-202ENST00000344114 BGNP21810 368 aa13.36□□□□□ -0.27
HERPUD1-202ENST00000344114 CTSOP43234 321 aaPredicted RBP13.36□□□□□ -0.27
HERPUD1-202ENST00000344114 STK19P49842 368 aaPredicted RBP13.36□□□□□ -0.27
HERPUD1-202ENST00000344114 VASPP50552 380 aaPredicted RBP13.36□□□□□ -0.27
HERPUD1-202ENST00000344114 C21orf59P57076 290 aa13.36□□□□□ -0.27
HERPUD1-202ENST00000344114 TMPRSS15P98073 1019 aa13.36□□□□□ -0.27
HERPUD1-202ENST00000344114 ECT2LQ008S8 904 aa13.36□□□□□ -0.27
HERPUD1-202ENST00000344114 SEMG2Q02383 582 aa13.36□□□□□ -0.27
HERPUD1-202ENST00000344114 RAD51Q06609 339 aa13.36□□□□□ -0.27
HERPUD1-202ENST00000344114 TYSND1Q2T9J0 566 aa13.36□□□□□ -0.27
HERPUD1-202ENST00000344114 TSNAXIP1Q2TAA8 658 aa13.36□□□□□ -0.27
HERPUD1-202ENST00000344114 ZNF776Q68DI1 518 aaPredicted RBP13.36□□□□□ -0.27
HERPUD1-202ENST00000344114 FAM45BPQ6NSW5 357 aa13.36□□□□□ -0.27
HERPUD1-202ENST00000344114 C6orf89Q6UWU4 347 aa13.36□□□□□ -0.27
HERPUD1-202ENST00000344114 USP30Q70CQ3 517 aa13.36□□□□□ -0.27
HERPUD1-202ENST00000344114 YTHDF3Q7Z739 585 aaKnown RBP13.36□□□□□ -0.27
HERPUD1-202ENST00000344114 SDCCAG8Q86SQ7 713 aaPredicted RBP13.36□□□□□ -0.27
HERPUD1-202ENST00000344114 PLPP6Q8IY26 295 aa13.36□□□□□ -0.27
HERPUD1-202ENST00000344114 GPATCH11Q8N954 259 aa13.36□□□□□ -0.27
HERPUD1-202ENST00000344114 OR4K2Q8NGD2 314 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms