RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.02□□□□□ -0.32
TUBD1-202ENST00000340993 APOLD1Q96LR9 279 aa13.02□□□□□ -0.32
TUBD1-202ENST00000340993 GSDMCQ9BYG8 508 aa13.02□□□□□ -0.32
TUBD1-202ENST00000340993 SLC32A1Q9H598 525 aa13.02□□□□□ -0.32
TUBD1-202ENST00000340993 PRDM8Q9NQV8 689 aa13.02□□□□□ -0.32
TUBD1-202ENST00000340993 VPS18Q9P253 973 aa13.02□□□□□ -0.32
TUBD1-202ENST00000340993 PSMD13Q9UNM6 376 aa13.02□□□□□ -0.32
TUBD1-202ENST00000340993 IQCF5A8MTL0 148 aa13.02□□□□□ -0.33
TUBD1-202ENST00000340993 LMO7DNF2Z398 122 aa13.02□□□□□ -0.33
TUBD1-202ENST00000340993 H7C0S8 307 aa13.02□□□□□ -0.33
TUBD1-202ENST00000340993 ZNF500O60304 480 aaPredicted RBP13.02□□□□□ -0.33
TUBD1-202ENST00000340993 ERVK-10P10266 1014 aa13.02□□□□□ -0.33
TUBD1-202ENST00000340993 PPM1FP49593 454 aaPredicted RBP13.02□□□□□ -0.33
TUBD1-202ENST00000340993 SLC14A1Q13336 389 aa13.02□□□□□ -0.33
TUBD1-202ENST00000340993 NFE2L1Q14494 772 aa13.02□□□□□ -0.33
TUBD1-202ENST00000340993 HLTFQ14527 1009 aaKnown RBP eCLIP13.02□□□□□ -0.33
TUBD1-202ENST00000340993 CRYMQ14894 314 aa13.02□□□□□ -0.33
TUBD1-202ENST00000340993 TRIP6Q15654 476 aaKnown RBP13.02□□□□□ -0.33
TUBD1-202ENST00000340993 INAVAQ3KP66 663 aa13.02□□□□□ -0.33
TUBD1-202ENST00000340993 PPM1JQ5JR12 505 aa13.02□□□□□ -0.33
TUBD1-202ENST00000340993 FAM83HQ6ZRV2 1179 aaPredicted RBP13.02□□□□□ -0.33
TUBD1-202ENST00000340993 DENND6AQ8IWF6 608 aa13.02□□□□□ -0.33
TUBD1-202ENST00000340993 SLC35F3Q8IY50 421 aa13.02□□□□□ -0.33
TUBD1-202ENST00000340993 MMGT1Q8N4V1 131 aa13.02□□□□□ -0.33
TUBD1-202ENST00000340993 ZDHHC1Q8WTX9 485 aa13.02□□□□□ -0.33
TUBD1-202ENST00000340993 ULK4Q96C45 1275 aa13.02□□□□□ -0.33
TUBD1-202ENST00000340993 ZCCHC2Q9C0B9 1178 aaKnown RBP13.02□□□□□ -0.33
TUBD1-202ENST00000340993 IARS2Q9NSE4 1012 aaKnown RBP13.02□□□□□ -0.33
TUBD1-202ENST00000340993 ZDHHC3Q9NYG2 299 aa13.02□□□□□ -0.33
TUBD1-202ENST00000340993 NLGN3Q9NZ94 848 aa13.02□□□□□ -0.33
TUBD1-202ENST00000340993 WHRNQ9P202 907 aa13.02□□□□□ -0.33
TUBD1-202ENST00000340993 TBC1D29Q9UFV1 150 aa13.02□□□□□ -0.33
TUBD1-202ENST00000340993 ZC3H7BQ9UGR2 993 aaKnown RBP13.02□□□□□ -0.33
TUBD1-202ENST00000340993 CFAP20Q9Y6A4 193 aaKnown RBP13.02□□□□□ -0.33
TUBD1-202ENST00000340993 PDZK1P1A8MUH7 402 aa13.01□□□□□ -0.33
TUBD1-202ENST00000340993 VEGFDO43915 354 aa13.01□□□□□ -0.33
TUBD1-202ENST00000340993 CBFA2T3O75081 653 aa13.01□□□□□ -0.33
TUBD1-202ENST00000340993 POP7O75817 140 aaKnown RBP13.01□□□□□ -0.33
TUBD1-202ENST00000340993 KCNK5O95279 499 aa13.01□□□□□ -0.33
TUBD1-202ENST00000340993 POLBP06746 335 aa13.01□□□□□ -0.33
TUBD1-202ENST00000340993 RALBP11234 206 aa13.01□□□□□ -0.33
TUBD1-202ENST00000340993 ATP1B2P14415 290 aaPredicted RBP13.01□□□□□ -0.33
TUBD1-202ENST00000340993 ZNF7P17097 686 aaPredicted RBP13.01□□□□□ -0.33
TUBD1-202ENST00000340993 PAMP19021 973 aa13.01□□□□□ -0.33
TUBD1-202ENST00000340993 EIF3BP55884 814 aaKnown RBP13.01□□□□□ -0.33
TUBD1-202ENST00000340993 MPP1Q00013 466 aa13.01□□□□□ -0.33
TUBD1-202ENST00000340993 CTBP1Q13363 440 aa13.01□□□□□ -0.33
TUBD1-202ENST00000340993 THOC5Q13769 683 aaKnown RBP13.01□□□□□ -0.33
TUBD1-202ENST00000340993 TUBB2AQ13885 445 aa13.01□□□□□ -0.33
TUBD1-202ENST00000340993 ZNF789Q5FWF6 425 aa13.01□□□□□ -0.33
TUBD1-202ENST00000340993 ZNF470Q6ECI4 717 aa13.01□□□□□ -0.33
TUBD1-202ENST00000340993 GUSBP11Q6P575 273 aa13.01□□□□□ -0.33
TUBD1-202ENST00000340993 ZDHHC24Q6UX98 284 aa13.01□□□□□ -0.33
TUBD1-202ENST00000340993 KRT222Q8N1A0 295 aa13.01□□□□□ -0.33
TUBD1-202ENST00000340993 FSTL5Q8N475 847 aaPredicted RBP13.01□□□□□ -0.33
TUBD1-202ENST00000340993 Q8N9G6 341 aaPredicted RBP13.01□□□□□ -0.33
TUBD1-202ENST00000340993 GPBAR1Q8TDU6 330 aa13.01□□□□□ -0.33
TUBD1-202ENST00000340993 SCG3Q8WXD2 468 aaKnown RBP13.01□□□□□ -0.33
TUBD1-202ENST00000340993 EBNA1BP2Q99848 306 aaKnown RBP13.01□□□□□ -0.33
TUBD1-202ENST00000340993 RTKNQ9BST9 563 aa13.01□□□□□ -0.33
TUBD1-202ENST00000340993 TUBB2BQ9BVA1 445 aa13.01□□□□□ -0.33
TUBD1-202ENST00000340993 MRM3Q9HC36 420 aaKnown RBP13.01□□□□□ -0.33
TUBD1-202ENST00000340993 FBXO6Q9NRD1 293 aaPredicted RBP13.01□□□□□ -0.33
TUBD1-202ENST00000340993 SMOXQ9NWM0 555 aa13.01□□□□□ -0.33
TUBD1-202ENST00000340993 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.01□□□□□ -0.33
TUBD1-202ENST00000340993 CRYL1Q9Y2S2 319 aa13.01□□□□□ -0.33
TUBD1-202ENST00000340993 PCDHGB2Q9Y5G2 931 aa13.01□□□□□ -0.33
TUBD1-202ENST00000340993 V9GYY5 206 aaPredicted RBP13.01□□□□□ -0.33
TUBD1-202ENST00000340993 PRAMEF33A0A0G2JMD5 474 aa13□□□□□ -0.33
TUBD1-202ENST00000340993 ZCWPW2A0A1B0GU75 182 aa13□□□□□ -0.33
TUBD1-202ENST00000340993 FAM237BA0A1B0GVD1 139 aa13□□□□□ -0.33
TUBD1-202ENST00000340993 CFAP99D6REC4 459 aa13□□□□□ -0.33
TUBD1-202ENST00000340993 TM4SF5O14894 197 aa13□□□□□ -0.33
TUBD1-202ENST00000340993 KMOO15229 486 aa13□□□□□ -0.33
TUBD1-202ENST00000340993 PGAM1P18669 254 aa13□□□□□ -0.33
TUBD1-202ENST00000340993 ACVR1Q04771 509 aa13□□□□□ -0.33
TUBD1-202ENST00000340993 BIRC2Q13490 618 aa13□□□□□ -0.33
TUBD1-202ENST00000340993 HSP90AA5PQ58FG0 334 aa13□□□□□ -0.33
TUBD1-202ENST00000340993 C6orf132Q5T0Z8 1188 aa13□□□□□ -0.33
TUBD1-202ENST00000340993 TRMT10BQ6PF06 316 aaKnown RBP13□□□□□ -0.33
TUBD1-202ENST00000340993 UNC5AQ6ZN44 842 aa13□□□□□ -0.33
TUBD1-202ENST00000340993 KCNMB4Q86W47 210 aa13□□□□□ -0.33
TUBD1-202ENST00000340993 MARCH9Q86YJ5 346 aa13□□□□□ -0.33
TUBD1-202ENST00000340993 GSPT2Q8IYD1 628 aaKnown RBP13□□□□□ -0.33
TUBD1-202ENST00000340993 SERBP1Q8NC51 408 aaKnown RBP eCLIP13□□□□□ -0.33
TUBD1-202ENST00000340993 BBOF1Q8ND07 529 aa13□□□□□ -0.33
TUBD1-202ENST00000340993 LKAAEAR1Q8TD35 194 aa13□□□□□ -0.33
TUBD1-202ENST00000340993 SCARF2Q96GP6 870 aaPredicted RBP13□□□□□ -0.33
TUBD1-202ENST00000340993 C9orf72Q96LT7 481 aa13□□□□□ -0.33
TUBD1-202ENST00000340993 TRNAU1APQ9NX07 287 aaKnown RBP13□□□□□ -0.33
TUBD1-202ENST00000340993 TRBV5-4A0A0C4DH59 114 aa12.99□□□□□ -0.33
TUBD1-202ENST00000340993 LY6G6EA0A0G2JKS1 128 aa12.99□□□□□ -0.33
TUBD1-202ENST00000340993 OR52A4PA6NMU1 304 aa12.99□□□□□ -0.33
TUBD1-202ENST00000340993 CHUKO15111 745 aa12.99□□□□□ -0.33
TUBD1-202ENST00000340993 SGTAO43765 313 aa12.99□□□□□ -0.33
TUBD1-202ENST00000340993 NDUFS3O75489 264 aa12.99□□□□□ -0.33
TUBD1-202ENST00000340993 TRIM16O95361 564 aa12.99□□□□□ -0.33
TUBD1-202ENST00000340993 PREPP48147 710 aa12.99□□□□□ -0.33
TUBD1-202ENST00000340993 ARCN1P48444 511 aaKnown RBP12.99□□□□□ -0.33
TUBD1-202ENST00000340993 BOP1Q14137 746 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms