RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 MEI1Q5TIA1 1274 aa13.13□□□□□ -0.31
SIRPB3P-201ENST00000340424 TMEM164Q5U3C3 297 aa13.13□□□□□ -0.31
SIRPB3P-201ENST00000340424 KCTD11Q693B1 232 aa13.13□□□□□ -0.31
SIRPB3P-201ENST00000340424 TMEM71Q6P5X7 295 aa13.13□□□□□ -0.31
SIRPB3P-201ENST00000340424 CRTC3Q6UUV7 619 aa13.13□□□□□ -0.31
SIRPB3P-201ENST00000340424 ABRAXAS1Q6UWZ7 409 aa13.13□□□□□ -0.31
SIRPB3P-201ENST00000340424 LINC00523Q86TU6 105 aa13.13□□□□□ -0.31
SIRPB3P-201ENST00000340424 SLC13A5Q86YT5 568 aaPredicted RBP13.13□□□□□ -0.31
SIRPB3P-201ENST00000340424 ZNF547Q8IVP9 402 aa13.13□□□□□ -0.31
SIRPB3P-201ENST00000340424 TRIM58Q8NG06 486 aa13.13□□□□□ -0.31
SIRPB3P-201ENST00000340424 ZNF398Q8TD17 642 aa13.13□□□□□ -0.31
SIRPB3P-201ENST00000340424 HEXDCQ8WVB3 486 aa13.13□□□□□ -0.31
SIRPB3P-201ENST00000340424 ULK4Q96C45 1275 aa13.13□□□□□ -0.31
SIRPB3P-201ENST00000340424 NUDT22Q9BRQ3 303 aa13.13□□□□□ -0.31
SIRPB3P-201ENST00000340424 TMEM121Q9BTD3 319 aa13.13□□□□□ -0.31
SIRPB3P-201ENST00000340424 ZMYND15Q9H091 742 aa13.13□□□□□ -0.31
SIRPB3P-201ENST00000340424 SEMA6CQ9H3T2 930 aa13.13□□□□□ -0.31
SIRPB3P-201ENST00000340424 POT1Q9NUX5 634 aa13.13□□□□□ -0.31
SIRPB3P-201ENST00000340424 PDP2Q9P2J9 529 aa13.13□□□□□ -0.31
SIRPB3P-201ENST00000340424 ARL5AQ9Y689 179 aa13.13□□□□□ -0.31
SIRPB3P-201ENST00000340424 ZFYVE26Q68DK2 2539 aa13.12□□□□□ -0.31
SIRPB3P-201ENST00000340424 AGAP14A8MT82 685 aa13.12□□□□□ -0.31
SIRPB3P-201ENST00000340424 PDZK1P1A8MUH7 402 aa13.12□□□□□ -0.31
SIRPB3P-201ENST00000340424 GAPDHSO14556 408 aaPredicted RBP13.12□□□□□ -0.31
SIRPB3P-201ENST00000340424 LIASO43766 372 aa13.12□□□□□ -0.31
SIRPB3P-201ENST00000340424 SRP72O76094 671 aaKnown RBP13.12□□□□□ -0.31
SIRPB3P-201ENST00000340424 AP2A1O95782 977 aa13.12□□□□□ -0.31
SIRPB3P-201ENST00000340424 THRAP10827 490 aa13.12□□□□□ -0.31
SIRPB3P-201ENST00000340424 RALBP11234 206 aa13.12□□□□□ -0.31
SIRPB3P-201ENST00000340424 MSH3P20585 1137 aa13.12□□□□□ -0.31
SIRPB3P-201ENST00000340424 ITPKBP27987 946 aa13.12□□□□□ -0.31
SIRPB3P-201ENST00000340424 ZNF140P52738 457 aaPredicted RBP13.12□□□□□ -0.31
SIRPB3P-201ENST00000340424 TMPRSS3P57727 454 aa13.12□□□□□ -0.31
SIRPB3P-201ENST00000340424 UBE2IP63279 158 aaKnown RBP13.12□□□□□ -0.31
SIRPB3P-201ENST00000340424 MSLNQ13421 630 aaPredicted RBP13.12□□□□□ -0.31
SIRPB3P-201ENST00000340424 NFATC2Q13469 925 aa13.12□□□□□ -0.31
SIRPB3P-201ENST00000340424 LAMB3Q13751 1172 aa13.12□□□□□ -0.31
SIRPB3P-201ENST00000340424 OASLQ15646 514 aaKnown RBP13.12□□□□□ -0.31
SIRPB3P-201ENST00000340424 KHDC1Q4VXA5 237 aaKnown RBP13.12□□□□□ -0.31
SIRPB3P-201ENST00000340424 ZNF648Q5T619 568 aaPredicted RBP13.12□□□□□ -0.31
SIRPB3P-201ENST00000340424 GPRC6AQ5T6X5 926 aa13.12□□□□□ -0.31
SIRPB3P-201ENST00000340424 DENND5AQ6IQ26 1287 aa13.12□□□□□ -0.31
SIRPB3P-201ENST00000340424 USP53Q70EK8 1073 aa13.12□□□□□ -0.31
SIRPB3P-201ENST00000340424 TMPRSS9Q7Z410 1059 aa13.12□□□□□ -0.31
SIRPB3P-201ENST00000340424 C11orf96Q7Z7L8 435 aa13.12□□□□□ -0.31
SIRPB3P-201ENST00000340424 AMZ2Q86W34 360 aa13.12□□□□□ -0.31
SIRPB3P-201ENST00000340424 TRIM48Q8IWZ4 208 aa13.12□□□□□ -0.31
SIRPB3P-201ENST00000340424 AGBL5Q8NDL9 886 aa13.12□□□□□ -0.31
SIRPB3P-201ENST00000340424 OR4K2Q8NGD2 314 aa13.12□□□□□ -0.31
SIRPB3P-201ENST00000340424 MAIP1Q8WWC4 291 aa13.12□□□□□ -0.31
SIRPB3P-201ENST00000340424 CCDC74BQ96LY2 380 aa13.12□□□□□ -0.31
SIRPB3P-201ENST00000340424 APOL2Q9BQE5 337 aa13.12□□□□□ -0.31
SIRPB3P-201ENST00000340424 PRORYQ9H606 182 aa13.12□□□□□ -0.31
SIRPB3P-201ENST00000340424 ASB8Q9H765 288 aa13.12□□□□□ -0.31
SIRPB3P-201ENST00000340424 PRDM8Q9NQV8 689 aa13.12□□□□□ -0.31
SIRPB3P-201ENST00000340424 NPDC1Q9NQX5 325 aaPredicted RBP13.12□□□□□ -0.31
SIRPB3P-201ENST00000340424 PISDQ9UG56 409 aa13.12□□□□□ -0.31
SIRPB3P-201ENST00000340424 SLC23A2Q9UGH3 650 aa13.12□□□□□ -0.31
SIRPB3P-201ENST00000340424 R3HDM2Q9Y2K5 976 aaKnown RBP13.12□□□□□ -0.31
SIRPB3P-201ENST00000340424 TRBV23OR9-2A0A075B6M9 112 aa13.11□□□□□ -0.31
SIRPB3P-201ENST00000340424 TCRBV7S2A1N4TA0A589 114 aa13.11□□□□□ -0.31
SIRPB3P-201ENST00000340424 H7C0S8 307 aa13.11□□□□□ -0.31
SIRPB3P-201ENST00000340424 KLK10O43240 276 aa13.11□□□□□ -0.31
SIRPB3P-201ENST00000340424 UGT1A9O60656 530 aa13.11□□□□□ -0.31
SIRPB3P-201ENST00000340424 METTL18O95568 372 aa13.11□□□□□ -0.31
SIRPB3P-201ENST00000340424 GAS8O95995 478 aa13.11□□□□□ -0.31
SIRPB3P-201ENST00000340424 VIPP01282 170 aa13.11□□□□□ -0.31
SIRPB3P-201ENST00000340424 UGT1A6P19224 532 aa13.11□□□□□ -0.31
SIRPB3P-201ENST00000340424 ITGALP20701 1170 aa13.11□□□□□ -0.31
SIRPB3P-201ENST00000340424 UGT1A1P22309 533 aa13.11□□□□□ -0.31
SIRPB3P-201ENST00000340424 UGT1A4P22310 534 aa13.11□□□□□ -0.31
SIRPB3P-201ENST00000340424 SLC5A2P31639 672 aa13.11□□□□□ -0.31
SIRPB3P-201ENST00000340424 AKT1P31749 480 aa13.11□□□□□ -0.31
SIRPB3P-201ENST00000340424 CSF2RBP32927 897 aa13.11□□□□□ -0.31
SIRPB3P-201ENST00000340424 CSTF2P33240 577 aaKnown RBP eCLIP13.11□□□□□ -0.31
SIRPB3P-201ENST00000340424 UGT1A3P35503 534 aa13.11□□□□□ -0.31
SIRPB3P-201ENST00000340424 FDFT1P37268 417 aa13.11□□□□□ -0.31
SIRPB3P-201ENST00000340424 HALP42357 657 aa13.11□□□□□ -0.31
SIRPB3P-201ENST00000340424 PPM1FP49593 454 aaPredicted RBP13.11□□□□□ -0.31
SIRPB3P-201ENST00000340424 GDF10P55107 478 aa13.11□□□□□ -0.31
SIRPB3P-201ENST00000340424 KIF26BQ2KJY2 2108 aa13.11□□□□□ -0.31
SIRPB3P-201ENST00000340424 PLA2G4EQ3MJ16 856 aa13.11□□□□□ -0.31
SIRPB3P-201ENST00000340424 GPR33Q49SQ1 333 aa13.11□□□□□ -0.31
SIRPB3P-201ENST00000340424 ZNF574Q6ZN55 896 aaPredicted RBP13.11□□□□□ -0.31
SIRPB3P-201ENST00000340424 JAMLQ86YT9 394 aa13.11□□□□□ -0.31
SIRPB3P-201ENST00000340424 PLXDC1Q8IUK5 500 aa13.11□□□□□ -0.31
SIRPB3P-201ENST00000340424 BEND7Q8N7W2 519 aaPredicted RBP13.11□□□□□ -0.31
SIRPB3P-201ENST00000340424 RASGEF1AQ8N9B8 481 aa13.11□□□□□ -0.31
SIRPB3P-201ENST00000340424 UGT1A7Q9HAW7 530 aa13.11□□□□□ -0.31
SIRPB3P-201ENST00000340424 UGT1A10Q9HAW8 530 aa13.11□□□□□ -0.31
SIRPB3P-201ENST00000340424 UGT1A8Q9HAW9 530 aa13.11□□□□□ -0.31
SIRPB3P-201ENST00000340424 LZTFL1Q9NQ48 299 aa13.11□□□□□ -0.31
SIRPB3P-201ENST00000340424 FKBPLQ9UIM3 349 aa13.11□□□□□ -0.31
SIRPB3P-201ENST00000340424 CRLS1Q9UJA2 301 aa13.11□□□□□ -0.31
SIRPB3P-201ENST00000340424 DNAJC16Q9Y2G8 782 aa13.11□□□□□ -0.31
SIRPB3P-201ENST00000340424 TEX51A0A1B0GUA7 166 aa13.1□□□□□ -0.31
SIRPB3P-201ENST00000340424 PMS2P1A4D2B8 440 aa13.1□□□□□ -0.31
SIRPB3P-201ENST00000340424 CFAP99D6REC4 459 aa13.1□□□□□ -0.31
SIRPB3P-201ENST00000340424 LDB2O43679 373 aa13.1□□□□□ -0.31
SIRPB3P-201ENST00000340424 BUD23O43709 281 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms