RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 DET1Q7L5Y6 550 aa13.14□□□□□ -0.31
NUDCD3-201ENST00000338427 GAS2L3Q86XJ1 694 aa13.14□□□□□ -0.31
NUDCD3-201ENST00000338427 TRAPPC5Q8IUR0 188 aa13.14□□□□□ -0.31
NUDCD3-201ENST00000338427 TRIM48Q8IWZ4 208 aa13.14□□□□□ -0.31
NUDCD3-201ENST00000338427 ACRBPQ8NEB7 543 aa13.14□□□□□ -0.31
NUDCD3-201ENST00000338427 ACTL9Q8TC94 416 aa13.14□□□□□ -0.31
NUDCD3-201ENST00000338427 RSC1A1Q92681 617 aa13.14□□□□□ -0.31
NUDCD3-201ENST00000338427 ELMO2Q96JJ3 720 aa13.14□□□□□ -0.31
NUDCD3-201ENST00000338427 DPYSL5Q9BPU6 564 aa13.14□□□□□ -0.31
NUDCD3-201ENST00000338427 ARHGAP9Q9BRR9 750 aa13.14□□□□□ -0.31
NUDCD3-201ENST00000338427 B3GNT4Q9C0J1 378 aa13.14□□□□□ -0.31
NUDCD3-201ENST00000338427 FAM96AQ9H5X1 160 aa13.14□□□□□ -0.31
NUDCD3-201ENST00000338427 RAD18Q9NS91 495 aa13.14□□□□□ -0.31
NUDCD3-201ENST00000338427 IL17BQ9UHF5 180 aa13.14□□□□□ -0.31
NUDCD3-201ENST00000338427 PILRAQ9UKJ1 303 aa13.14□□□□□ -0.31
NUDCD3-201ENST00000338427 PCDHA3Q9Y5H8 950 aa13.14□□□□□ -0.31
NUDCD3-201ENST00000338427 ARL5AQ9Y689 179 aa13.14□□□□□ -0.31
NUDCD3-201ENST00000338427 COL6A6A6NMZ7 2263 aa13.13□□□□□ -0.31
NUDCD3-201ENST00000338427 OR2AG2A6NM03 316 aa13.13□□□□□ -0.31
NUDCD3-201ENST00000338427 CCL22O00626 93 aa13.13□□□□□ -0.31
NUDCD3-201ENST00000338427 CAPN5O15484 640 aaPredicted RBP13.13□□□□□ -0.31
NUDCD3-201ENST00000338427 UBXN7O94888 489 aa13.13□□□□□ -0.31
NUDCD3-201ENST00000338427 NDUFA10O95299 355 aa13.13□□□□□ -0.31
NUDCD3-201ENST00000338427 PYGMP11217 842 aa13.13□□□□□ -0.31
NUDCD3-201ENST00000338427 IDSP22304 550 aa13.13□□□□□ -0.31
NUDCD3-201ENST00000338427 PBLDP30039 288 aaPredicted RBP13.13□□□□□ -0.31
NUDCD3-201ENST00000338427 NAP1L1P55209 391 aaKnown RBP13.13□□□□□ -0.31
NUDCD3-201ENST00000338427 TMPRSS15P98073 1019 aa13.13□□□□□ -0.31
NUDCD3-201ENST00000338427 FOXM1Q08050 763 aa13.13□□□□□ -0.31
NUDCD3-201ENST00000338427 NFE2L1Q14494 772 aa13.13□□□□□ -0.31
NUDCD3-201ENST00000338427 PPP2R5EQ16537 467 aa13.13□□□□□ -0.31
NUDCD3-201ENST00000338427 CCDC181Q5TID7 509 aa13.13□□□□□ -0.31
NUDCD3-201ENST00000338427 PDPK2PQ6A1A2 396 aa13.13□□□□□ -0.31
NUDCD3-201ENST00000338427 FAM92BQ6ZTR7 304 aa13.13□□□□□ -0.31
NUDCD3-201ENST00000338427 CCDC170Q8IYT3 715 aa13.13□□□□□ -0.31
NUDCD3-201ENST00000338427 ZNF398Q8TD17 642 aa13.13□□□□□ -0.31
NUDCD3-201ENST00000338427 ALG3Q92685 438 aa13.13□□□□□ -0.31
NUDCD3-201ENST00000338427 C9orf72Q96LT7 481 aa13.13□□□□□ -0.31
NUDCD3-201ENST00000338427 VPS35Q96QK1 796 aa13.13□□□□□ -0.31
NUDCD3-201ENST00000338427 DDA1Q9BW61 102 aa13.13□□□□□ -0.31
NUDCD3-201ENST00000338427 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.13□□□□□ -0.31
NUDCD3-201ENST00000338427 STN1Q9H668 368 aaKnown RBP13.13□□□□□ -0.31
NUDCD3-201ENST00000338427 SLC40A1Q9NP59 571 aa13.13□□□□□ -0.31
NUDCD3-201ENST00000338427 FBXO8Q9NRD0 319 aa13.13□□□□□ -0.31
NUDCD3-201ENST00000338427 CFAP20Q9Y6A4 193 aaKnown RBP13.13□□□□□ -0.31
NUDCD3-201ENST00000338427 GLYATL1P3A0A0U1RQE8 302 aa13.12□□□□□ -0.31
NUDCD3-201ENST00000338427 LILRA5A6NI73 299 aa13.12□□□□□ -0.31
NUDCD3-201ENST00000338427 HACD1B0YJ81 288 aa13.12□□□□□ -0.31
NUDCD3-201ENST00000338427 J3QKU1 62 aa13.12□□□□□ -0.31
NUDCD3-201ENST00000338427 STX7O15400 261 aaKnown RBP13.12□□□□□ -0.31
NUDCD3-201ENST00000338427 SLC2A4P14672 509 aa13.12□□□□□ -0.31
NUDCD3-201ENST00000338427 F8A1P23610 371 aa13.12□□□□□ -0.31
NUDCD3-201ENST00000338427 PSMB4P28070 264 aa13.12□□□□□ -0.31
NUDCD3-201ENST00000338427 ADRA1AP35348 466 aa13.12□□□□□ -0.31
NUDCD3-201ENST00000338427 CYLC1P35663 651 aaPredicted RBP13.12□□□□□ -0.31
NUDCD3-201ENST00000338427 SPAM1P38567 509 aa13.12□□□□□ -0.31
NUDCD3-201ENST00000338427 ATP1A2P50993 1020 aa13.12□□□□□ -0.31
NUDCD3-201ENST00000338427 EPHA4P54764 986 aa13.12□□□□□ -0.31
NUDCD3-201ENST00000338427 EIF3EP60228 445 aaKnown RBP13.12□□□□□ -0.31
NUDCD3-201ENST00000338427 MPP3Q13368 585 aa13.12□□□□□ -0.31
NUDCD3-201ENST00000338427 MSLNQ13421 630 aaPredicted RBP13.12□□□□□ -0.31
NUDCD3-201ENST00000338427 GPR18Q14330 331 aa13.12□□□□□ -0.31
NUDCD3-201ENST00000338427 ANKRD20A2Q5SQ80 823 aa13.12□□□□□ -0.31
NUDCD3-201ENST00000338427 GPRC6AQ5T6X5 926 aa13.12□□□□□ -0.31
NUDCD3-201ENST00000338427 ATP1A1-AS1Q5TC04 95 aa13.12□□□□□ -0.31
NUDCD3-201ENST00000338427 ANKRD20A1Q5TYW2 823 aa13.12□□□□□ -0.31
NUDCD3-201ENST00000338427 ANKRD20A3Q5VUR7 823 aa13.12□□□□□ -0.31
NUDCD3-201ENST00000338427 C11orf63Q6NUN7 778 aa13.12□□□□□ -0.31
NUDCD3-201ENST00000338427 DARS2Q6PI48 645 aaKnown RBP13.12□□□□□ -0.31
NUDCD3-201ENST00000338427 RANBP10Q6VN20 620 aa13.12□□□□□ -0.31
NUDCD3-201ENST00000338427 CERS6Q6ZMG9 384 aa13.12□□□□□ -0.31
NUDCD3-201ENST00000338427 GLT6D1Q7Z4J2 308 aa13.12□□□□□ -0.31
NUDCD3-201ENST00000338427 ZSCAN1Q8NBB4 408 aa13.12□□□□□ -0.31
NUDCD3-201ENST00000338427 CCDC112Q8NEF3 446 aa13.12□□□□□ -0.31
NUDCD3-201ENST00000338427 OR4K2Q8NGD2 314 aa13.12□□□□□ -0.31
NUDCD3-201ENST00000338427 GPR150Q8NGU9 434 aa13.12□□□□□ -0.31
NUDCD3-201ENST00000338427 CCDC110Q8TBZ0 833 aa13.12□□□□□ -0.31
NUDCD3-201ENST00000338427 RBM41Q96IZ5 413 aaKnown RBP13.12□□□□□ -0.31
NUDCD3-201ENST00000338427 TTC25Q96NG3 672 aa13.12□□□□□ -0.31
NUDCD3-201ENST00000338427 NRTNQ99748 197 aa13.12□□□□□ -0.31
NUDCD3-201ENST00000338427 TIMM29Q9BSF4 260 aa13.12□□□□□ -0.31
NUDCD3-201ENST00000338427 ASPSCR1Q9BZE9 553 aa13.12□□□□□ -0.31
NUDCD3-201ENST00000338427 OSBPL8Q9BZF1 889 aa13.12□□□□□ -0.31
NUDCD3-201ENST00000338427 TRIM4Q9C037 500 aa13.12□□□□□ -0.31
NUDCD3-201ENST00000338427 FAM8A1Q9UBU6 413 aa13.12□□□□□ -0.31
NUDCD3-201ENST00000338427 FKBPLQ9UIM3 349 aa13.12□□□□□ -0.31
NUDCD3-201ENST00000338427 MRPS18BQ9Y676 258 aaKnown RBP13.12□□□□□ -0.31
NUDCD3-201ENST00000338427 BSNQ9UPA5 3926 aa13.11□□□□□ -0.31
NUDCD3-201ENST00000338427 MACROD2A1Z1Q3 448 aa13.11□□□□□ -0.31
NUDCD3-201ENST00000338427 APOC4-APOC2K7ER74 178 aa13.11□□□□□ -0.31
NUDCD3-201ENST00000338427 POLR1CO15160 346 aaPredicted RBP13.11□□□□□ -0.31
NUDCD3-201ENST00000338427 KCNN4O15554 427 aa13.11□□□□□ -0.31
NUDCD3-201ENST00000338427 MTSS1O43312 755 aa13.11□□□□□ -0.31
NUDCD3-201ENST00000338427 SLC28A2O43868 658 aa13.11□□□□□ -0.31
NUDCD3-201ENST00000338427 STK17BO94768 372 aa13.11□□□□□ -0.31
NUDCD3-201ENST00000338427 APOC2P02655 101 aa13.11□□□□□ -0.31
NUDCD3-201ENST00000338427 C9P02748 559 aa13.11□□□□□ -0.31
NUDCD3-201ENST00000338427 PRSS56P0CW18 603 aa13.11□□□□□ -0.31
NUDCD3-201ENST00000338427 PRKAR1AP10644 381 aa13.11□□□□□ -0.31
NUDCD3-201ENST00000338427 RBP3P10745 1247 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms