RNA–Protein interactions for RNA: ENST00000338045.7

LIMS1-202, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-202ENST00000338045 ACSS2Q9NR19 701 aa15.27■□□□□ 0.03
LIMS1-202ENST00000338045 RNF112Q9ULX5 631 aa15.27■□□□□ 0.03
LIMS1-202ENST00000338045 FADS3Q9Y5Q0 445 aa15.27■□□□□ 0.03
LIMS1-202ENST00000338045 NPEPPSL1A6NEC2 478 aa15.26■□□□□ 0.03
LIMS1-202ENST00000338045 SOX1O00570 391 aaPredicted RBP15.26■□□□□ 0.03
LIMS1-202ENST00000338045 MAGEC1O60732 1142 aa15.26■□□□□ 0.03
LIMS1-202ENST00000338045 UBOX5O94941 541 aa15.26■□□□□ 0.03
LIMS1-202ENST00000338045 OR56A5P0C7T3 313 aa15.26■□□□□ 0.03
LIMS1-202ENST00000338045 C6P13671 934 aa15.26■□□□□ 0.03
LIMS1-202ENST00000338045 ITGB6P18564 788 aa15.26■□□□□ 0.03
LIMS1-202ENST00000338045 DGKAP23743 735 aa15.26■□□□□ 0.03
LIMS1-202ENST00000338045 TIE1P35590 1138 aa15.26■□□□□ 0.03
LIMS1-202ENST00000338045 RGS4P49798 205 aa15.26■□□□□ 0.03
LIMS1-202ENST00000338045 CST6Q15828 149 aa15.26■□□□□ 0.03
LIMS1-202ENST00000338045 C2orf27AQ580R0 203 aa15.26■□□□□ 0.03
LIMS1-202ENST00000338045 TMEM196Q5HYL7 178 aa15.26■□□□□ 0.03
LIMS1-202ENST00000338045 CFAP157Q5JU67 520 aa15.26■□□□□ 0.03
LIMS1-202ENST00000338045 FRMD7Q6ZUT3 714 aa15.26■□□□□ 0.03
LIMS1-202ENST00000338045 NLRP8Q86W28 1048 aa15.26■□□□□ 0.03
LIMS1-202ENST00000338045 GLYATL1Q969I3 302 aa15.26■□□□□ 0.03
LIMS1-202ENST00000338045 FAM161BQ96MY7 647 aa15.26■□□□□ 0.03
LIMS1-202ENST00000338045 MYLK2Q9H1R3 596 aa15.26■□□□□ 0.03
LIMS1-202ENST00000338045 GSTO2Q9H4Y5 243 aa15.26■□□□□ 0.03
LIMS1-202ENST00000338045 HEY2Q9UBP5 337 aa15.26■□□□□ 0.03
LIMS1-202ENST00000338045 PIKFYVEQ9Y2I7 2098 aa15.26■□□□□ 0.03
LIMS1-202ENST00000338045 CFAP99D6REC4 459 aa15.25■□□□□ 0.03
LIMS1-202ENST00000338045 MATN2O00339 956 aa15.25■□□□□ 0.03
LIMS1-202ENST00000338045 AP1G1O43747 822 aa15.25■□□□□ 0.03
LIMS1-202ENST00000338045 SGTAO43765 313 aa15.25■□□□□ 0.03
LIMS1-202ENST00000338045 SYNCRIPO60506 623 aaKnown RBP15.25■□□□□ 0.03
LIMS1-202ENST00000338045 RECQL5O94762 991 aaPredicted RBP15.25■□□□□ 0.03
LIMS1-202ENST00000338045 AP2A2O94973 939 aa15.25■□□□□ 0.03
LIMS1-202ENST00000338045 ADH1BP00325 375 aa15.25■□□□□ 0.03
LIMS1-202ENST00000338045 SOD1P00441 154 aa15.25■□□□□ 0.03
LIMS1-202ENST00000338045 C5AR1P21730 350 aa15.25■□□□□ 0.03
LIMS1-202ENST00000338045 MPSTP25325 297 aa15.25■□□□□ 0.03
LIMS1-202ENST00000338045 NTSR1P30989 418 aa15.25■□□□□ 0.03
LIMS1-202ENST00000338045 RPL14P50914 215 aaKnown RBP15.25■□□□□ 0.03
LIMS1-202ENST00000338045 SEC13P55735 322 aa15.25■□□□□ 0.03
LIMS1-202ENST00000338045 DPTQ07507 201 aa15.25■□□□□ 0.03
LIMS1-202ENST00000338045 BNIP1Q12981 228 aa15.25■□□□□ 0.03
LIMS1-202ENST00000338045 GBX1Q14549 363 aa15.25■□□□□ 0.03
LIMS1-202ENST00000338045 TTLL9Q3SXZ7 439 aa15.25■□□□□ 0.03
LIMS1-202ENST00000338045 KHDC1Q4VXA5 237 aaKnown RBP15.25■□□□□ 0.03
LIMS1-202ENST00000338045 ACSBG2Q5FVE4 666 aa15.25■□□□□ 0.03
LIMS1-202ENST00000338045 LDLRAP1Q5SW96 308 aa15.25■□□□□ 0.03
LIMS1-202ENST00000338045 MTDHQ86UE4 582 aaKnown RBP15.25■□□□□ 0.03
LIMS1-202ENST00000338045 AADATQ8N5Z0 425 aa15.25■□□□□ 0.03
LIMS1-202ENST00000338045 PTGR2Q8N8N7 351 aaPredicted RBP15.25■□□□□ 0.03
LIMS1-202ENST00000338045 ERP27Q96DN0 273 aa15.25■□□□□ 0.03
LIMS1-202ENST00000338045 DCUN1D1Q96GG9 259 aa15.25■□□□□ 0.03
LIMS1-202ENST00000338045 DNAJC28Q9NX36 388 aa15.25■□□□□ 0.03
LIMS1-202ENST00000338045 KCTD5Q9NXV2 234 aa15.25■□□□□ 0.03
LIMS1-202ENST00000338045 LIMD1Q9UGP4 676 aa15.25■□□□□ 0.03
LIMS1-202ENST00000338045 MBD1Q9UIS9 605 aaPredicted RBP15.25■□□□□ 0.03
LIMS1-202ENST00000338045 TMCO1Q9UM00 188 aa15.25■□□□□ 0.03
LIMS1-202ENST00000338045 SLC12A4Q9UP95 1085 aa15.25■□□□□ 0.03
LIMS1-202ENST00000338045 PIAS3Q9Y6X2 628 aa15.25■□□□□ 0.03
LIMS1-202ENST00000338045 F5P12259 2224 aa15.25■□□□□ 0.03
LIMS1-202ENST00000338045 LRRK1Q38SD2 2015 aa15.25■□□□□ 0.03
LIMS1-202ENST00000338045 EIF3FO00303 357 aaPredicted RBP15.25■□□□□ 0.03
LIMS1-202ENST00000338045 MID1O15344 667 aa15.25■□□□□ 0.03
LIMS1-202ENST00000338045 KIF1CO43896 1103 aaKnown RBP15.25■□□□□ 0.03
LIMS1-202ENST00000338045 RNASEH1O60930 286 aaKnown RBP15.25■□□□□ 0.03
LIMS1-202ENST00000338045 EGFP01133 1207 aa15.25■□□□□ 0.03
LIMS1-202ENST00000338045 CBSLP0DN79 551 aa15.25■□□□□ 0.03
LIMS1-202ENST00000338045 DRD1P21728 446 aa15.25■□□□□ 0.03
LIMS1-202ENST00000338045 SERPINB3P29508 390 aa15.25■□□□□ 0.03
LIMS1-202ENST00000338045 AKT1P31749 480 aa15.25■□□□□ 0.03
LIMS1-202ENST00000338045 CBSP35520 551 aa15.25■□□□□ 0.03
LIMS1-202ENST00000338045 COPAP53621 1224 aa15.25■□□□□ 0.03
LIMS1-202ENST00000338045 UNC50Q53HI1 259 aa15.25■□□□□ 0.03
LIMS1-202ENST00000338045 AGBL4Q5VU57 503 aa15.25■□□□□ 0.03
LIMS1-202ENST00000338045 ADAMTSL2Q86TH1 951 aa15.25■□□□□ 0.03
LIMS1-202ENST00000338045 OR2T3Q8NH03 318 aa15.25■□□□□ 0.03
LIMS1-202ENST00000338045 STON2Q8WXE9 905 aa15.25■□□□□ 0.03
LIMS1-202ENST00000338045 EXT2Q93063 718 aa15.25■□□□□ 0.03
LIMS1-202ENST00000338045 NUS1Q96E22 293 aa15.25■□□□□ 0.03
LIMS1-202ENST00000338045 EBF4Q9BQW3 602 aa15.25■□□□□ 0.03
LIMS1-202ENST00000338045 PHF7Q9BWX1 381 aaPredicted RBP15.25■□□□□ 0.03
LIMS1-202ENST00000338045 C1QTNF3Q9BXJ4 246 aa15.25■□□□□ 0.03
LIMS1-202ENST00000338045 HEBP1Q9NRV9 189 aa15.25■□□□□ 0.03
LIMS1-202ENST00000338045 ZDHHC2Q9UIJ5 367 aa15.25■□□□□ 0.03
LIMS1-202ENST00000338045 COQ6Q9Y2Z9 468 aa15.25■□□□□ 0.03
LIMS1-202ENST00000338045 SUPT3HB4E1H0 165 aa15.24■□□□□ 0.03
LIMS1-202ENST00000338045 SLCO1B7G3V0H7 640 aa15.24■□□□□ 0.03
LIMS1-202ENST00000338045 STX16-NPEPL1H3BU86 382 aa15.24■□□□□ 0.03
LIMS1-202ENST00000338045 QSOX1O00391 747 aa15.24■□□□□ 0.03
LIMS1-202ENST00000338045 NEMP1O14524 444 aa15.24■□□□□ 0.03
LIMS1-202ENST00000338045 STX16O14662 325 aa15.24■□□□□ 0.03
LIMS1-202ENST00000338045 MMP20O60882 483 aa15.24■□□□□ 0.03
LIMS1-202ENST00000338045 MTX2O75431 263 aa15.24■□□□□ 0.03
LIMS1-202ENST00000338045 SUPT3HO75486 399 aa15.24■□□□□ 0.03
LIMS1-202ENST00000338045 C7P10643 843 aa15.24■□□□□ 0.03
LIMS1-202ENST00000338045 GFAPP14136 432 aa15.24■□□□□ 0.03
LIMS1-202ENST00000338045 AOAHP28039 575 aa15.24■□□□□ 0.03
LIMS1-202ENST00000338045 CCR7P32248 378 aa15.24■□□□□ 0.03
LIMS1-202ENST00000338045 IDH3AP50213 366 aa15.24■□□□□ 0.03
LIMS1-202ENST00000338045 HK3P52790 923 aa15.24■□□□□ 0.03
LIMS1-202ENST00000338045 TAS2R38P59533 333 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms