RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 WISP3O95389 354 aaPredicted RBP21.22■□□□□ 0.99
TPM1-204ENST00000334895 MT-ND3P03897 115 aa21.22■□□□□ 0.99
TPM1-204ENST00000334895 HOXC4P09017 264 aaPredicted RBP21.22■□□□□ 0.99
TPM1-204ENST00000334895 CREB1P16220 341 aa21.22■□□□□ 0.99
TPM1-204ENST00000334895 SERPINB8P50452 374 aa21.22■□□□□ 0.99
TPM1-204ENST00000334895 PTRHD1Q6GMV3 140 aaKnown RBP21.22■□□□□ 0.99
TPM1-204ENST00000334895 EXOC3L1Q86VI1 746 aa21.22■□□□□ 0.99
TPM1-204ENST00000334895 SRRM1Q8IYB3 904 aaKnown RBP21.22■□□□□ 0.99
TPM1-204ENST00000334895 BEND7Q8N7W2 519 aaPredicted RBP21.22■□□□□ 0.99
TPM1-204ENST00000334895 GIMAP7Q8NHV1 300 aa21.22■□□□□ 0.99
TPM1-204ENST00000334895 C1orf216Q8TAB5 229 aa21.22■□□□□ 0.99
TPM1-204ENST00000334895 KCNJ9Q92806 393 aa21.22■□□□□ 0.99
TPM1-204ENST00000334895 SLC30A3Q99726 388 aa21.22■□□□□ 0.99
TPM1-204ENST00000334895 MEI4A8MW99 385 aa21.21■□□□□ 0.99
TPM1-204ENST00000334895 GOLGA8RI6L899 631 aa21.21■□□□□ 0.99
TPM1-204ENST00000334895 VEGFDO43915 354 aa21.21■□□□□ 0.99
TPM1-204ENST00000334895 RHOBTB1O94844 696 aa21.21■□□□□ 0.99
TPM1-204ENST00000334895 AP2A2O94973 939 aa21.21■□□□□ 0.99
TPM1-204ENST00000334895 FUCA1P04066 466 aa21.21■□□□□ 0.99
TPM1-204ENST00000334895 KIAA1024LP59773 190 aa21.21■□□□□ 0.99
TPM1-204ENST00000334895 ZNF528Q3MIS6 628 aa21.21■□□□□ 0.99
TPM1-204ENST00000334895 PPM1JQ5JR12 505 aa21.21■□□□□ 0.99
TPM1-204ENST00000334895 ARMCX6Q7L4S7 300 aa21.21■□□□□ 0.99
TPM1-204ENST00000334895 ZNF547Q8IVP9 402 aa21.21■□□□□ 0.99
TPM1-204ENST00000334895 OR13H1Q8NG92 308 aa21.21■□□□□ 0.99
TPM1-204ENST00000334895 GPR21Q99679 349 aa21.21■□□□□ 0.99
TPM1-204ENST00000334895 FAM126AQ9BYI3 521 aaPredicted RBP21.21■□□□□ 0.99
TPM1-204ENST00000334895 ZCCHC2Q9C0B9 1178 aaKnown RBP21.21■□□□□ 0.99
TPM1-204ENST00000334895 GPR27Q9NS67 375 aa21.21■□□□□ 0.99
TPM1-204ENST00000334895 TNRC6BQ9UPQ9 1833 aaKnown RBP21.2■□□□□ 0.98
TPM1-204ENST00000334895 A6NNZ2 444 aa21.2■□□□□ 0.98
TPM1-204ENST00000334895 CACNB4O00305 520 aaPredicted RBP21.2■□□□□ 0.98
TPM1-204ENST00000334895 DNAJC6O75061 913 aa21.2■□□□□ 0.98
TPM1-204ENST00000334895 ASMTLO95671 621 aa21.2■□□□□ 0.98
TPM1-204ENST00000334895 CEACAM5P06731 702 aa21.2■□□□□ 0.98
TPM1-204ENST00000334895 OR56A5P0C7T3 313 aa21.2■□□□□ 0.98
TPM1-204ENST00000334895 SLC35E2BP0CK96 405 aa21.2■□□□□ 0.98
TPM1-204ENST00000334895 STMN1P16949 149 aa21.2■□□□□ 0.98
TPM1-204ENST00000334895 ITGB6P18564 788 aa21.2■□□□□ 0.98
TPM1-204ENST00000334895 CD9P21926 228 aa21.2■□□□□ 0.98
TPM1-204ENST00000334895 TYK2P29597 1187 aa21.2■□□□□ 0.98
TPM1-204ENST00000334895 PRLHRP49683 370 aa21.2■□□□□ 0.98
TPM1-204ENST00000334895 CLCN7P51798 805 aa21.2■□□□□ 0.98
TPM1-204ENST00000334895 RAB10P61026 200 aa21.2■□□□□ 0.98
TPM1-204ENST00000334895 NFATC4Q14934 902 aa21.2■□□□□ 0.98
TPM1-204ENST00000334895 TMEM220Q6QAJ8 160 aa21.2■□□□□ 0.98
TPM1-204ENST00000334895 TMEM207Q6UWW9 146 aa21.2■□□□□ 0.98
TPM1-204ENST00000334895 Q6ZSR6 202 aa21.2■□□□□ 0.98
TPM1-204ENST00000334895 C4orf33Q8N1A6 199 aa21.2■□□□□ 0.98
TPM1-204ENST00000334895 SLC22A18ASQ8N1D0 253 aa21.2■□□□□ 0.98
TPM1-204ENST00000334895 GOLGA6L1Q8N7Z2 621 aa21.2■□□□□ 0.98
TPM1-204ENST00000334895 DNASE2BQ8WZ79 361 aa21.2■□□□□ 0.98
TPM1-204ENST00000334895 SLC17A4Q9Y2C5 497 aa21.2■□□□□ 0.98
TPM1-204ENST00000334895 MYO15AQ9UKN7 3530 aa21.2■□□□□ 0.98
TPM1-204ENST00000334895 H3BMM5 538 aa21.19■□□□□ 0.98
TPM1-204ENST00000334895 CHUKO15111 745 aa21.19■□□□□ 0.98
TPM1-204ENST00000334895 NUAK1O60285 661 aa21.19■□□□□ 0.98
TPM1-204ENST00000334895 C2P06681 752 aa21.19■□□□□ 0.98
TPM1-204ENST00000334895 PYGBP11216 843 aa21.19■□□□□ 0.98
TPM1-204ENST00000334895 CHRM3P20309 590 aa21.19■□□□□ 0.98
TPM1-204ENST00000334895 CCNFP41002 786 aa21.19■□□□□ 0.98
TPM1-204ENST00000334895 MAGOHP61326 146 aaKnown RBP21.19■□□□□ 0.98
TPM1-204ENST00000334895 YPEL5P62699 121 aa21.19■□□□□ 0.98
TPM1-204ENST00000334895 BCL7AQ4VC05 210 aa21.19■□□□□ 0.98
TPM1-204ENST00000334895 PMS2CLQ68D20 193 aa21.19■□□□□ 0.98
TPM1-204ENST00000334895 LPCAT2Q7L5N7 544 aa21.19■□□□□ 0.98
TPM1-204ENST00000334895 CNPY4Q8N129 248 aa21.19■□□□□ 0.98
TPM1-204ENST00000334895 SIDT2Q8NBJ9 832 aaKnown RBP21.19■□□□□ 0.98
TPM1-204ENST00000334895 CD200R1Q8TD46 325 aa21.19■□□□□ 0.98
TPM1-204ENST00000334895 STMN4Q9H169 189 aaPredicted RBP21.19■□□□□ 0.98
TPM1-204ENST00000334895 KCNH6Q9H252 994 aa21.19■□□□□ 0.98
TPM1-204ENST00000334895 FGF22Q9HCT0 170 aa21.19■□□□□ 0.98
TPM1-204ENST00000334895 TAS2R13Q9NYV9 303 aa21.19■□□□□ 0.98
TPM1-204ENST00000334895 TRIM16O95361 564 aa21.18■□□□□ 0.98
TPM1-204ENST00000334895 WNT1P04628 370 aa21.18■□□□□ 0.98
TPM1-204ENST00000334895 KRT4P19013 534 aa21.18■□□□□ 0.98
TPM1-204ENST00000334895 ATP5DP30049 168 aa21.18■□□□□ 0.98
TPM1-204ENST00000334895 IRF9Q00978 393 aa21.18■□□□□ 0.98
TPM1-204ENST00000334895 SLC18A2Q05940 514 aa21.18■□□□□ 0.98
TPM1-204ENST00000334895 C11orf96Q7Z7L8 435 aa21.18■□□□□ 0.98
TPM1-204ENST00000334895 ZBTB44Q8NCP5 570 aa21.18■□□□□ 0.98
TPM1-204ENST00000334895 TSPAN17Q96FV3 270 aa21.18■□□□□ 0.98
TPM1-204ENST00000334895 PKNOX2Q96KN3 472 aa21.18■□□□□ 0.98
TPM1-204ENST00000334895 MED4Q9NPJ6 270 aa21.18■□□□□ 0.98
TPM1-204ENST00000334895 PCMTD2Q9NV79 361 aa21.18■□□□□ 0.98
TPM1-204ENST00000334895 ZSCAN32Q9NX65 697 aa21.18■□□□□ 0.98
TPM1-204ENST00000334895 CAMSAP3Q9P1Y5 1249 aaPredicted RBP21.18■□□□□ 0.98
TPM1-204ENST00000334895 PNMA8BQ9ULN7 279 aaPredicted RBP21.18■□□□□ 0.98
TPM1-204ENST00000334895 PRKAB1Q9Y478 270 aa21.18■□□□□ 0.98
TPM1-204ENST00000334895 LRP4O75096 1905 aa21.18■□□□□ 0.98
TPM1-204ENST00000334895 A0A096LPK6 155 aa21.18■□□□□ 0.98
TPM1-204ENST00000334895 A0A1W2PR77 199 aa21.18■□□□□ 0.98
TPM1-204ENST00000334895 E5RI56 91 aa21.18■□□□□ 0.98
TPM1-204ENST00000334895 TOR1BO14657 336 aa21.18■□□□□ 0.98
TPM1-204ENST00000334895 VPS26AO75436 327 aa21.18■□□□□ 0.98
TPM1-204ENST00000334895 TOP3BO95985 862 aaKnown RBP21.18■□□□□ 0.98
TPM1-204ENST00000334895 CRABP2P29373 138 aa21.18■□□□□ 0.98
TPM1-204ENST00000334895 CCR7P32248 378 aa21.18■□□□□ 0.98
TPM1-204ENST00000334895 RABIFP47224 123 aa21.18■□□□□ 0.98
TPM1-204ENST00000334895 SLC12A2P55011 1212 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms