RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 BTG3Q14201 252 aaPredicted RBP23.38■■□□□ 1.33
TSKU-201ENST00000333090 FXNQ16595 210 aa23.38■■□□□ 1.33
TSKU-201ENST00000333090 XKR7Q5GH72 579 aa23.38■■□□□ 1.33
TSKU-201ENST00000333090 PIK3R6Q5UE93 754 aa23.38■■□□□ 1.33
TSKU-201ENST00000333090 HS3ST5Q8IZT8 346 aa23.38■■□□□ 1.33
TSKU-201ENST00000333090 NUDT8Q8WV74 236 aa23.38■■□□□ 1.33
TSKU-201ENST00000333090 HDAC2Q92769 488 aaKnown RBP23.38■■□□□ 1.33
TSKU-201ENST00000333090 FKBP10Q96AY3 582 aa23.38■■□□□ 1.33
TSKU-201ENST00000333090 ITPKCQ96DU7 683 aa23.38■■□□□ 1.33
TSKU-201ENST00000333090 CATSPERZQ9NTU4 200 aa23.38■■□□□ 1.33
TSKU-201ENST00000333090 FAM118AQ9NWS6 357 aa23.38■■□□□ 1.33
TSKU-201ENST00000333090 G3V2T6 193 aa23.37■■□□□ 1.33
TSKU-201ENST00000333090 RPS17P08708 135 aaKnown RBP23.37■■□□□ 1.33
TSKU-201ENST00000333090 MLLT6P55198 1093 aaPredicted RBP23.37■■□□□ 1.33
TSKU-201ENST00000333090 C6orf141Q5SZD1 244 aa23.37■■□□□ 1.33
TSKU-201ENST00000333090 TTC23Q5W5X9 447 aa23.37■■□□□ 1.33
TSKU-201ENST00000333090 BRI3BPQ8WY22 251 aa23.37■■□□□ 1.33
TSKU-201ENST00000333090 ISG20Q96AZ6 181 aaKnown RBP23.37■■□□□ 1.33
TSKU-201ENST00000333090 HGH1Q9BTY7 390 aa23.37■■□□□ 1.33
TSKU-201ENST00000333090 TMEM247A6NEH6 219 aa23.37■■□□□ 1.33
TSKU-201ENST00000333090 TOR1BO14657 336 aa23.37■■□□□ 1.33
TSKU-201ENST00000333090 ANXA6P08133 673 aa23.37■■□□□ 1.33
TSKU-201ENST00000333090 UROSP10746 265 aa23.37■■□□□ 1.33
TSKU-201ENST00000333090 HOXB8P17481 243 aaPredicted RBP23.37■■□□□ 1.33
TSKU-201ENST00000333090 PIGAP37287 484 aa23.37■■□□□ 1.33
TSKU-201ENST00000333090 CRYBB1P53674 252 aaPredicted RBP23.37■■□□□ 1.33
TSKU-201ENST00000333090 CACNB2Q08289 660 aaPredicted RBP23.37■■□□□ 1.33
TSKU-201ENST00000333090 GALNT3Q14435 633 aa23.37■■□□□ 1.33
TSKU-201ENST00000333090 MFSD10Q14728 455 aa23.37■■□□□ 1.33
TSKU-201ENST00000333090 C6orf136Q5SQH8 315 aa23.37■■□□□ 1.33
TSKU-201ENST00000333090 FAM86B1Q8N7N1 296 aa23.37■■□□□ 1.33
TSKU-201ENST00000333090 CHDHQ8NE62 594 aaPredicted RBP23.37■■□□□ 1.33
TSKU-201ENST00000333090 HASPINQ8TF76 798 aa23.37■■□□□ 1.33
TSKU-201ENST00000333090 ALPK1Q96QP1 1244 aa23.37■■□□□ 1.33
TSKU-201ENST00000333090 ATAD3AQ9NVI7 634 aa23.37■■□□□ 1.33
TSKU-201ENST00000333090 GALPQ9UBC7 116 aa23.37■■□□□ 1.33
TSKU-201ENST00000333090 TBC1D4O60343 1298 aa23.36■■□□□ 1.33
TSKU-201ENST00000333090 PRSS23O95084 383 aa23.36■■□□□ 1.33
TSKU-201ENST00000333090 AGXTP21549 392 aa23.36■■□□□ 1.33
TSKU-201ENST00000333090 FMO4P31512 558 aa23.36■■□□□ 1.33
TSKU-201ENST00000333090 ARL1P40616 181 aaPredicted RBP23.36■■□□□ 1.33
TSKU-201ENST00000333090 OXA1LQ15070 435 aa23.36■■□□□ 1.33
TSKU-201ENST00000333090 SLC16A12Q6ZSM3 486 aa23.36■■□□□ 1.33
TSKU-201ENST00000333090 LRRTM3Q86VH5 581 aa23.36■■□□□ 1.33
TSKU-201ENST00000333090 SNX29P2Q8IUI4 249 aa23.36■■□□□ 1.33
TSKU-201ENST00000333090 PGBD5Q8N414 524 aa23.36■■□□□ 1.33
TSKU-201ENST00000333090 OR4L1Q8NH43 312 aa23.36■■□□□ 1.33
TSKU-201ENST00000333090 FIG4Q92562 907 aa23.36■■□□□ 1.33
TSKU-201ENST00000333090 AURKBQ96GD4 344 aaPredicted RBP23.36■■□□□ 1.33
TSKU-201ENST00000333090 POPDC3Q9HBV1 291 aa23.36■■□□□ 1.33
TSKU-201ENST00000333090 ZIM2Q9NZV7 527 aa23.36■■□□□ 1.33
TSKU-201ENST00000333090 NPEPPSL1A6NEC2 478 aa23.36■■□□□ 1.33
TSKU-201ENST00000333090 PTGES3LE9PB15 166 aa23.36■■□□□ 1.33
TSKU-201ENST00000333090 SCNN1GP51170 649 aa23.36■■□□□ 1.33
TSKU-201ENST00000333090 STC1P52823 247 aa23.36■■□□□ 1.33
TSKU-201ENST00000333090 BEX3Q00994 111 aa23.36■■□□□ 1.33
TSKU-201ENST00000333090 ZNF846Q147U1 533 aa23.36■■□□□ 1.33
TSKU-201ENST00000333090 PLA2G4EQ3MJ16 856 aa23.36■■□□□ 1.33
TSKU-201ENST00000333090 ANKRD34AQ69YU3 496 aa23.36■■□□□ 1.33
TSKU-201ENST00000333090 ZFAND4Q86XD8 727 aa23.36■■□□□ 1.33
TSKU-201ENST00000333090 CDYL2Q8N8U2 506 aa23.36■■□□□ 1.33
TSKU-201ENST00000333090 FBXO30Q8TB52 745 aa23.36■■□□□ 1.33
TSKU-201ENST00000333090 ARRDC2Q8TBH0 407 aa23.36■■□□□ 1.33
TSKU-201ENST00000333090 HBEGFQ99075 208 aa23.36■■□□□ 1.33
TSKU-201ENST00000333090 NUSAP1Q9BXS6 441 aaKnown RBP23.36■■□□□ 1.33
TSKU-201ENST00000333090 CCDC90BQ9GZT6 254 aa23.36■■□□□ 1.33
TSKU-201ENST00000333090 SYTL2Q9HCH5 934 aa23.36■■□□□ 1.33
TSKU-201ENST00000333090 BTN3A1O00481 513 aa23.35■■□□□ 1.33
TSKU-201ENST00000333090 PPP1R8Q12972 351 aaKnown RBP23.35■■□□□ 1.33
TSKU-201ENST00000333090 LAPTM5Q13571 262 aa23.35■■□□□ 1.33
TSKU-201ENST00000333090 DPY19L1Q2PZI1 675 aa23.35■■□□□ 1.33
TSKU-201ENST00000333090 CTU2Q2VPK5 515 aaKnown RBP23.35■■□□□ 1.33
TSKU-201ENST00000333090 ATP6AP1LQ52LC2 224 aa23.35■■□□□ 1.33
TSKU-201ENST00000333090 ALFQ53S48 1182 aa23.35■■□□□ 1.33
TSKU-201ENST00000333090 SULT1C3Q6IMI6 304 aa23.35■■□□□ 1.33
TSKU-201ENST00000333090 FAM171BQ6P995 826 aa23.35■■□□□ 1.33
TSKU-201ENST00000333090 DLEU7Q6UYE1 221 aa23.35■■□□□ 1.33
TSKU-201ENST00000333090 UMODL1-AS1Q8N2C9 162 aa23.35■■□□□ 1.33
TSKU-201ENST00000333090 ZNF555Q8NEP9 628 aa23.35■■□□□ 1.33
TSKU-201ENST00000333090 FUBP1Q96AE4 644 aaKnown RBP23.35■■□□□ 1.33
TSKU-201ENST00000333090 MS4A4AQ96JQ5 239 aa23.35■■□□□ 1.33
TSKU-201ENST00000333090 AMBRA1Q9C0C7 1298 aa23.35■■□□□ 1.33
TSKU-201ENST00000333090 DERL2Q9GZP9 239 aa23.35■■□□□ 1.33
TSKU-201ENST00000333090 CARS2Q9HA77 564 aaKnown RBP23.35■■□□□ 1.33
TSKU-201ENST00000333090 NMUR1Q9HB89 426 aa23.35■■□□□ 1.33
TSKU-201ENST00000333090 HMG20AQ9NP66 347 aa23.35■■□□□ 1.33
TSKU-201ENST00000333090 COMMD8Q9NX08 183 aa23.35■■□□□ 1.33
TSKU-201ENST00000333090 SNX5Q9Y5X3 404 aa23.35■■□□□ 1.33
TSKU-201ENST00000333090 GMNNO75496 209 aa23.35■■□□□ 1.33
TSKU-201ENST00000333090 RPP40O75818 363 aaKnown RBP23.35■■□□□ 1.33
TSKU-201ENST00000333090 HPCAL1P37235 193 aa23.35■■□□□ 1.33
TSKU-201ENST00000333090 BRCC3P46736 316 aa23.35■■□□□ 1.33
TSKU-201ENST00000333090 SCD5Q86SK9 330 aa23.35■■□□□ 1.33
TSKU-201ENST00000333090 CDK15Q96Q40 435 aa23.35■■□□□ 1.33
TSKU-201ENST00000333090 SEMA3CQ99985 751 aa23.35■■□□□ 1.33
TSKU-201ENST00000333090 ABHD16BQ9H3Z7 469 aa23.35■■□□□ 1.33
TSKU-201ENST00000333090 TAS2R13Q9NYV9 303 aa23.35■■□□□ 1.33
TSKU-201ENST00000333090 ZNF232Q9UNY5 417 aa23.35■■□□□ 1.33
TSKU-201ENST00000333090 LOC285095A0A1B0GVY8 99 aa23.34■■□□□ 1.33
TSKU-201ENST00000333090 INMTO95050 263 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms