RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 LRRC26Q2I0M4 334 aa17.19■□□□□ 0.34
DDX28-201ENST00000332395 OGFOD2Q6N063 350 aa17.19■□□□□ 0.34
DDX28-201ENST00000332395 GPRIN3Q6ZVF9 776 aa17.19■□□□□ 0.34
DDX28-201ENST00000332395 FRA10AC1Q70Z53 315 aa17.19■□□□□ 0.34
DDX28-201ENST00000332395 EFL1Q7Z2Z2 1120 aaKnown RBP17.19■□□□□ 0.34
DDX28-201ENST00000332395 RBFAQ8N0V3 343 aa17.19■□□□□ 0.34
DDX28-201ENST00000332395 RPL10LQ96L21 214 aaKnown RBP17.19■□□□□ 0.34
DDX28-201ENST00000332395 SLC39A3Q9BRY0 314 aa17.19■□□□□ 0.34
DDX28-201ENST00000332395 SMG9Q9H0W8 520 aaKnown RBP17.19■□□□□ 0.34
DDX28-201ENST00000332395 CD300AQ9UGN4 299 aa17.19■□□□□ 0.34
DDX28-201ENST00000332395 APPL1Q9UKG1 709 aa17.19■□□□□ 0.34
DDX28-201ENST00000332395 ZNF106Q9H2Y7 1883 aaKnown RBP17.19■□□□□ 0.34
DDX28-201ENST00000332395 PRSS51A0A1B0GVH4 220 aa17.19■□□□□ 0.34
DDX28-201ENST00000332395 LYNP07948 512 aa17.19■□□□□ 0.34
DDX28-201ENST00000332395 UBTFL6P0CB48 400 aaPredicted RBP17.19■□□□□ 0.34
DDX28-201ENST00000332395 UQCRBP14927 111 aa17.19■□□□□ 0.34
DDX28-201ENST00000332395 BPIP17213 487 aa17.19■□□□□ 0.34
DDX28-201ENST00000332395 CAPN3P20807 821 aa17.19■□□□□ 0.34
DDX28-201ENST00000332395 SERPINA4P29622 427 aa17.19■□□□□ 0.34
DDX28-201ENST00000332395 RPS6KA2Q15349 733 aa17.19■□□□□ 0.34
DDX28-201ENST00000332395 XKR7Q5GH72 579 aa17.19■□□□□ 0.34
DDX28-201ENST00000332395 SAMD4BQ5PRF9 694 aaKnown RBP17.19■□□□□ 0.34
DDX28-201ENST00000332395 RARS2Q5T160 578 aaKnown RBP17.19■□□□□ 0.34
DDX28-201ENST00000332395 LILRA6Q6PI73 481 aa17.19■□□□□ 0.34
DDX28-201ENST00000332395 SBSNQ6UWP8 590 aa17.19■□□□□ 0.34
DDX28-201ENST00000332395 CCDC149Q6ZUS6 474 aa17.19■□□□□ 0.34
DDX28-201ENST00000332395 ADAMTSL2Q86TH1 951 aa17.19■□□□□ 0.34
DDX28-201ENST00000332395 ZSWIM9Q86XI8 627 aa17.19■□□□□ 0.34
DDX28-201ENST00000332395 TMEM126BQ8IUX1 230 aa17.19■□□□□ 0.34
DDX28-201ENST00000332395 OR2AP1Q8NGE2 309 aa17.19■□□□□ 0.34
DDX28-201ENST00000332395 GCNAQ96QF7 691 aa17.19■□□□□ 0.34
DDX28-201ENST00000332395 COPS7BQ9H9Q2 264 aaPredicted RBP17.19■□□□□ 0.34
DDX28-201ENST00000332395 GNPTGQ9UJJ9 305 aa17.19■□□□□ 0.34
DDX28-201ENST00000332395 DTNAQ9Y4J8 743 aa17.19■□□□□ 0.34
DDX28-201ENST00000332395 TRIM43BA6NCK2 446 aa17.18■□□□□ 0.34
DDX28-201ENST00000332395 ITGB6P18564 788 aa17.18■□□□□ 0.34
DDX28-201ENST00000332395 SLC7A2P52569 658 aa17.18■□□□□ 0.34
DDX28-201ENST00000332395 DIO3P55073 304 aa17.18■□□□□ 0.34
DDX28-201ENST00000332395 VPS26BQ4G0F5 336 aa17.18■□□□□ 0.34
DDX28-201ENST00000332395 CMTM8Q8IZV2 173 aa17.18■□□□□ 0.34
DDX28-201ENST00000332395 LILRA2Q8N149 483 aa17.18■□□□□ 0.34
DDX28-201ENST00000332395 ELMOD1Q8N336 334 aa17.18■□□□□ 0.34
DDX28-201ENST00000332395 DRAXINQ8NBI3 349 aaPredicted RBP17.18■□□□□ 0.34
DDX28-201ENST00000332395 TRIM43Q96BQ3 446 aaPredicted RBP17.18■□□□□ 0.34
DDX28-201ENST00000332395 ZNF382Q96SR6 550 aa17.18■□□□□ 0.34
DDX28-201ENST00000332395 CORO1BQ9BR76 489 aa17.18■□□□□ 0.34
DDX28-201ENST00000332395 SLC46A2Q9BY10 475 aa17.18■□□□□ 0.34
DDX28-201ENST00000332395 NDUFAF1Q9Y375 327 aa17.18■□□□□ 0.34
DDX28-201ENST00000332395 GPR45Q9Y5Y3 372 aa17.18■□□□□ 0.34
DDX28-201ENST00000332395 PRSS21Q9Y6M0 314 aa17.18■□□□□ 0.34
DDX28-201ENST00000332395 PTPRSQ13332 1948 aa17.18■□□□□ 0.34
DDX28-201ENST00000332395 TRBV5-4A0A0C4DH59 114 aa17.18■□□□□ 0.34
DDX28-201ENST00000332395 GLYATL1P3A0A0U1RQE8 302 aa17.18■□□□□ 0.34
DDX28-201ENST00000332395 A8MX80 341 aa17.18■□□□□ 0.34
DDX28-201ENST00000332395 C9JVG2 144 aa17.18■□□□□ 0.34
DDX28-201ENST00000332395 ANGPT2O15123 496 aa17.18■□□□□ 0.34
DDX28-201ENST00000332395 SRCP12931 536 aa17.18■□□□□ 0.34
DDX28-201ENST00000332395 UGT1A6P19224 532 aa17.18■□□□□ 0.34
DDX28-201ENST00000332395 UGT1A1P22309 533 aa17.18■□□□□ 0.34
DDX28-201ENST00000332395 UGT1A4P22310 534 aa17.18■□□□□ 0.34
DDX28-201ENST00000332395 ACRV1P26436 265 aa17.18■□□□□ 0.34
DDX28-201ENST00000332395 UGT1A3P35503 534 aa17.18■□□□□ 0.34
DDX28-201ENST00000332395 UGT1A5P35504 534 aa17.18■□□□□ 0.34
DDX28-201ENST00000332395 CTSOP43234 321 aaPredicted RBP17.18■□□□□ 0.34
DDX28-201ENST00000332395 STK19P49842 368 aaPredicted RBP17.18■□□□□ 0.34
DDX28-201ENST00000332395 TRAP1Q12931 704 aaKnown RBP17.18■□□□□ 0.34
DDX28-201ENST00000332395 OTOP2Q7RTS6 562 aa17.18■□□□□ 0.34
DDX28-201ENST00000332395 SPATA19Q7Z5L4 167 aa17.18■□□□□ 0.34
DDX28-201ENST00000332395 CLDN19Q8N6F1 224 aa17.18■□□□□ 0.34
DDX28-201ENST00000332395 KREMEN2Q8NCW0 462 aa17.18■□□□□ 0.34
DDX28-201ENST00000332395 ICA1LQ8NDH6 482 aa17.18■□□□□ 0.34
DDX28-201ENST00000332395 OR52B6Q8NGF0 335 aa17.18■□□□□ 0.34
DDX28-201ENST00000332395 LKAAEAR1Q8TD35 194 aa17.18■□□□□ 0.34
DDX28-201ENST00000332395 ACOX2Q99424 681 aa17.18■□□□□ 0.34
DDX28-201ENST00000332395 C17orf80Q9BSJ5 609 aa17.18■□□□□ 0.34
DDX28-201ENST00000332395 MAP10Q9P2G4 905 aa17.18■□□□□ 0.34
DDX28-201ENST00000332395 RNASEH1O60930 286 aaKnown RBP17.17■□□□□ 0.34
DDX28-201ENST00000332395 OR4F21O95013 312 aa17.17■□□□□ 0.34
DDX28-201ENST00000332395 CXCL14O95715 111 aa17.17■□□□□ 0.34
DDX28-201ENST00000332395 CYBBP04839 570 aa17.17■□□□□ 0.34
DDX28-201ENST00000332395 C8BP07358 591 aa17.17■□□□□ 0.34
DDX28-201ENST00000332395 CHRNA6Q15825 494 aa17.17■□□□□ 0.34
DDX28-201ENST00000332395 PITRM1Q5JRX3 1037 aa17.17■□□□□ 0.34
DDX28-201ENST00000332395 TSPAN33Q86UF1 283 aa17.17■□□□□ 0.34
DDX28-201ENST00000332395 CDYL2Q8N8U2 506 aa17.17■□□□□ 0.34
DDX28-201ENST00000332395 DCBLD1Q8N8Z6 715 aa17.17■□□□□ 0.34
DDX28-201ENST00000332395 LMLNQ96KR4 655 aa17.17■□□□□ 0.34
DDX28-201ENST00000332395 CDK15Q96Q40 435 aa17.17■□□□□ 0.34
DDX28-201ENST00000332395 PKP2Q99959 881 aa17.17■□□□□ 0.34
DDX28-201ENST00000332395 GPATCH1Q9BRR8 931 aaKnown RBP17.17■□□□□ 0.34
DDX28-201ENST00000332395 PFDN4Q9NQP4 134 aa17.17■□□□□ 0.34
DDX28-201ENST00000332395 ASAH2Q9NR71 780 aa17.17■□□□□ 0.34
DDX28-201ENST00000332395 CRLS1Q9UJA2 301 aa17.17■□□□□ 0.34
DDX28-201ENST00000332395 NPIPB15A6NHN6 443 aaPredicted RBP17.16■□□□□ 0.34
DDX28-201ENST00000332395 SLC25A14O95258 325 aaPredicted RBP17.16■□□□□ 0.34
DDX28-201ENST00000332395 ADH1AP07327 375 aa17.16■□□□□ 0.34
DDX28-201ENST00000332395 LINC00271P0C7V0 271 aa17.16■□□□□ 0.34
DDX28-201ENST00000332395 VCLP18206 1134 aa17.16■□□□□ 0.34
DDX28-201ENST00000332395 HLA-FP30511 346 aa17.16■□□□□ 0.34
DDX28-201ENST00000332395 GSTT1P30711 240 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms