RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 HDAC10Q969S8 669 aa16.29■□□□□ 0.2
PDLIM1-201ENST00000329399 TSNARE1Q96NA8 513 aa16.29■□□□□ 0.2
PDLIM1-201ENST00000329399 LYSMD1Q96S90 227 aa16.29■□□□□ 0.2
PDLIM1-201ENST00000329399 PLCD4Q9BRC7 762 aa16.29■□□□□ 0.2
PDLIM1-201ENST00000329399 SLC2A6Q9UGQ3 507 aa16.29■□□□□ 0.2
PDLIM1-201ENST00000329399 PCDHB9Q9Y5E1 797 aa16.29■□□□□ 0.2
PDLIM1-201ENST00000329399 HMGCLP35914 325 aa16.29■□□□□ 0.2
PDLIM1-201ENST00000329399 LIG3P49916 1009 aa16.29■□□□□ 0.2
PDLIM1-201ENST00000329399 BMPR2Q13873 1038 aa16.29■□□□□ 0.2
PDLIM1-201ENST00000329399 AARS2Q5JTZ9 985 aaKnown RBP16.29■□□□□ 0.2
PDLIM1-201ENST00000329399 GKAP1Q5VSY0 366 aaPredicted RBP16.29■□□□□ 0.2
PDLIM1-201ENST00000329399 ZDHHC20Q5W0Z9 365 aa16.29■□□□□ 0.2
PDLIM1-201ENST00000329399 Q6ZSR6 202 aa16.29■□□□□ 0.2
PDLIM1-201ENST00000329399 ZNF771Q7L3S4 317 aaPredicted RBP16.29■□□□□ 0.2
PDLIM1-201ENST00000329399 ABI3BPQ7Z7G0 1075 aa16.29■□□□□ 0.2
PDLIM1-201ENST00000329399 GATAD2AQ86YP4 633 aa16.29■□□□□ 0.2
PDLIM1-201ENST00000329399 PELI3Q8N2H9 469 aa16.29■□□□□ 0.2
PDLIM1-201ENST00000329399 PIH1D2Q8WWB5 315 aa16.29■□□□□ 0.2
PDLIM1-201ENST00000329399 SREK1Q8WXA9 508 aaKnown RBP16.29■□□□□ 0.2
PDLIM1-201ENST00000329399 CDKN2AIPNLQ96HQ2 116 aa16.29■□□□□ 0.2
PDLIM1-201ENST00000329399 SNX15Q9NRS6 342 aa16.29■□□□□ 0.2
PDLIM1-201ENST00000329399 PNMA8BQ9ULN7 279 aaPredicted RBP16.29■□□□□ 0.2
PDLIM1-201ENST00000329399 PKP3Q9Y446 797 aa16.29■□□□□ 0.2
PDLIM1-201ENST00000329399 TDRD6O60522 2096 aaKnown RBP16.28■□□□□ 0.2
PDLIM1-201ENST00000329399 A0A087X1B8 175 aa16.28■□□□□ 0.2
PDLIM1-201ENST00000329399 A0A1B0GTQ1 180 aa16.28■□□□□ 0.2
PDLIM1-201ENST00000329399 SPAARA0A1B0GVQ0 90 aa16.28■□□□□ 0.2
PDLIM1-201ENST00000329399 FOXO6A8MYZ6 492 aa16.28■□□□□ 0.2
PDLIM1-201ENST00000329399 GOLGA8RI6L899 631 aa16.28■□□□□ 0.2
PDLIM1-201ENST00000329399 TPP1O14773 563 aa16.28■□□□□ 0.2
PDLIM1-201ENST00000329399 STX7O15400 261 aaKnown RBP16.28■□□□□ 0.2
PDLIM1-201ENST00000329399 CD3EAPO15446 510 aaKnown RBP16.28■□□□□ 0.2
PDLIM1-201ENST00000329399 CBFA2T3O75081 653 aa16.28■□□□□ 0.2
PDLIM1-201ENST00000329399 VIMP08670 466 aaKnown RBP16.28■□□□□ 0.2
PDLIM1-201ENST00000329399 THEGLP0DJG4 465 aa16.28■□□□□ 0.2
PDLIM1-201ENST00000329399 AKT2P31751 481 aa16.28■□□□□ 0.2
PDLIM1-201ENST00000329399 IGFALSP35858 605 aa16.28■□□□□ 0.2
PDLIM1-201ENST00000329399 NUDT1P36639 197 aa16.28■□□□□ 0.2
PDLIM1-201ENST00000329399 SLC1A2P43004 574 aa16.28■□□□□ 0.2
PDLIM1-201ENST00000329399 NOVA1P51513 510 aaKnown RBP16.28■□□□□ 0.2
PDLIM1-201ENST00000329399 SLC12A2P55011 1212 aa16.28■□□□□ 0.2
PDLIM1-201ENST00000329399 SGCGQ13326 291 aa16.28■□□□□ 0.2
PDLIM1-201ENST00000329399 LRRC14Q15048 493 aa16.28■□□□□ 0.2
PDLIM1-201ENST00000329399 WSCD2Q2TBF2 565 aa16.28■□□□□ 0.2
PDLIM1-201ENST00000329399 ZNF542PQ5EBM4 170 aa16.28■□□□□ 0.2
PDLIM1-201ENST00000329399 N4BP2L1Q5TBK1 243 aaPredicted RBP16.28■□□□□ 0.2
PDLIM1-201ENST00000329399 IL27RAQ6UWB1 636 aa16.28■□□□□ 0.2
PDLIM1-201ENST00000329399 LIPIQ6XZB0 460 aa16.28■□□□□ 0.2
PDLIM1-201ENST00000329399 MICALCLQ6ZW33 695 aa16.28■□□□□ 0.2
PDLIM1-201ENST00000329399 CBARPQ8N350 705 aaPredicted RBP16.28■□□□□ 0.2
PDLIM1-201ENST00000329399 TP53I13Q8NBR0 393 aaPredicted RBP16.28■□□□□ 0.2
PDLIM1-201ENST00000329399 KLHDC7BQ96G42 594 aa16.28■□□□□ 0.2
PDLIM1-201ENST00000329399 LENG8Q96PV6 779 aaPredicted RBP16.28■□□□□ 0.2
PDLIM1-201ENST00000329399 ELF4Q99607 663 aaPredicted RBP16.28■□□□□ 0.2
PDLIM1-201ENST00000329399 TTC1Q99614 292 aa16.28■□□□□ 0.2
PDLIM1-201ENST00000329399 PAIP2Q9BPZ3 127 aaKnown RBP16.28■□□□□ 0.2
PDLIM1-201ENST00000329399 POPDC3Q9HBV1 291 aa16.28■□□□□ 0.2
PDLIM1-201ENST00000329399 CATSPERZQ9NTU4 200 aa16.28■□□□□ 0.2
PDLIM1-201ENST00000329399 B4GALT6Q9UBX8 382 aa16.28■□□□□ 0.2
PDLIM1-201ENST00000329399 HS3ST3A1Q9Y663 406 aa16.28■□□□□ 0.2
PDLIM1-201ENST00000329399 COMMD10Q9Y6G5 202 aa16.28■□□□□ 0.2
PDLIM1-201ENST00000329399 A0A0J9YYE9 177 aa16.27■□□□□ 0.19
PDLIM1-201ENST00000329399 CER1O95813 267 aa16.27■□□□□ 0.19
PDLIM1-201ENST00000329399 TRBC1P01850 177 aa16.27■□□□□ 0.19
PDLIM1-201ENST00000329399 ALPIP09923 528 aa16.27■□□□□ 0.19
PDLIM1-201ENST00000329399 C6P13671 934 aa16.27■□□□□ 0.19
PDLIM1-201ENST00000329399 STMN1P16949 149 aa16.27■□□□□ 0.19
PDLIM1-201ENST00000329399 CTPS1P17812 591 aa16.27■□□□□ 0.19
PDLIM1-201ENST00000329399 DRD4P21917 467 aa16.27■□□□□ 0.19
PDLIM1-201ENST00000329399 XPAP23025 273 aaPredicted RBP16.27■□□□□ 0.19
PDLIM1-201ENST00000329399 CSRP3P50461 194 aa16.27■□□□□ 0.19
PDLIM1-201ENST00000329399 PDE1CQ14123 709 aaPredicted RBP16.27■□□□□ 0.19
PDLIM1-201ENST00000329399 USP10Q14694 798 aaKnown RBP16.27■□□□□ 0.19
PDLIM1-201ENST00000329399 TSNAXIP1Q2TAA8 658 aa16.27■□□□□ 0.19
PDLIM1-201ENST00000329399 FASTKD1Q53R41 847 aaKnown RBP16.27■□□□□ 0.19
PDLIM1-201ENST00000329399 LYPLAL1Q5VWZ2 237 aa16.27■□□□□ 0.19
PDLIM1-201ENST00000329399 ATG16L1Q676U5 607 aa16.27■□□□□ 0.19
PDLIM1-201ENST00000329399 CERS6Q6ZMG9 384 aa16.27■□□□□ 0.19
PDLIM1-201ENST00000329399 RFLNAQ6ZTI6 216 aa16.27■□□□□ 0.19
PDLIM1-201ENST00000329399 TSPAN33Q86UF1 283 aa16.27■□□□□ 0.19
PDLIM1-201ENST00000329399 IQCHQ86VS3 1027 aa16.27■□□□□ 0.19
PDLIM1-201ENST00000329399 RAVER1Q8IY67 606 aaKnown RBP16.27■□□□□ 0.19
PDLIM1-201ENST00000329399 ANKS4BQ8N8V4 417 aa16.27■□□□□ 0.19
PDLIM1-201ENST00000329399 PLA2G15Q8NCC3 412 aa16.27■□□□□ 0.19
PDLIM1-201ENST00000329399 RDH11Q8TC12 318 aa16.27■□□□□ 0.19
PDLIM1-201ENST00000329399 CXorf40AQ8TE69 158 aa16.27■□□□□ 0.19
PDLIM1-201ENST00000329399 ZNF473Q8WTR7 871 aaKnown RBP16.27■□□□□ 0.19
PDLIM1-201ENST00000329399 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.27■□□□□ 0.192e-6■■■■■ 54.9
PDLIM1-201ENST00000329399 DNAJC1Q96KC8 554 aaKnown RBP16.27■□□□□ 0.19
PDLIM1-201ENST00000329399 SLC13A1Q9BZW2 595 aa16.27■□□□□ 0.19
PDLIM1-201ENST00000329399 GPR27Q9NS67 375 aa16.27■□□□□ 0.19
PDLIM1-201ENST00000329399 PCMTD2Q9NV79 361 aa16.27■□□□□ 0.19
PDLIM1-201ENST00000329399 KLF15Q9UIH9 416 aa16.27■□□□□ 0.19
PDLIM1-201ENST00000329399 APPL1Q9UKG1 709 aa16.27■□□□□ 0.19
PDLIM1-201ENST00000329399 MTO1Q9Y2Z2 717 aaKnown RBP16.27■□□□□ 0.19
PDLIM1-201ENST00000329399 ARL5AQ9Y689 179 aa16.27■□□□□ 0.19
PDLIM1-201ENST00000329399 GOLGA4Q13439 2230 aaKnown RBP16.27■□□□□ 0.19
PDLIM1-201ENST00000329399 TP53BP1Q12888 1972 aaPredicted RBP16.27■□□□□ 0.19
PDLIM1-201ENST00000329399 TM7SF2O76062 418 aa16.26■□□□□ 0.19
PDLIM1-201ENST00000329399 ZNF883P0CG24 379 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms