RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 ARMC4Q5T2S8 1044 aa12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 CPNE9Q8IYJ1 553 aa12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 ISL2Q96A47 359 aa12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 NSUN5Q96P11 429 aaKnown RBP12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 IPPKQ9H8X2 491 aa12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 ZIM2Q9NZV7 527 aa12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 GPC6Q9Y625 555 aaPredicted RBP12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 PDZK1P1A8MUH7 402 aa12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 ZNF99A8MXY4 864 aaPredicted RBP12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 ZSCAN9O15535 394 aaPredicted RBP12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 RGS10O43665 173 aa12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 UGT2B11O75310 529 aa12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 EPN2O95208 641 aa12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 HOXA11P31270 313 aaPredicted RBP12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 NIPAL1Q6NVV3 410 aa12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 GPRIN1Q7Z2K8 1008 aa12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 R3HCC1LQ7Z5L2 792 aaKnown RBP12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 SLC13A3Q8WWT9 602 aa12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 POP5Q969H6 163 aaKnown RBP12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 REXO5Q96IC2 774 aaKnown RBP12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 MYRFLQ96LU7 910 aa12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 CACYBPQ9HB71 228 aaKnown RBP12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 RASSF1Q9NS23 344 aa12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 KRT84Q9NSB2 600 aa12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 RPS6KA6Q9UK32 745 aa12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 DUSP12Q9UNI6 340 aa12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 CAPN3P20807 821 aa12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 KCNA5P22460 613 aa12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 MAGEA8P43361 318 aa12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 DGKQP52824 942 aa12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 NANOGP8Q6NSW7 305 aa12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 CCDC80Q76M96 950 aa12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 HS6ST3Q8IZP7 471 aa12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 CFAP52Q8N1V2 620 aa12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 TSPEARQ8WU66 669 aa12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 NSMCE3Q96MG7 304 aa12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 TUBA1CQ9BQE3 449 aa12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 C16orf70Q9BSU1 422 aa12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 NUAK2Q9H093 628 aa12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 NANOGQ9H9S0 305 aa12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 PLAC1Q9HBJ0 212 aa12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 IGSF5Q9NSI5 407 aa12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 ARL15Q9NXU5 204 aa12.62□□□□□ -0.39
DNMT3A-202ENST00000321117 LRRC14BA6NHZ5 514 aa12.61□□□□□ -0.39
DNMT3A-202ENST00000321117 C5orf58C9J3I9 102 aa12.61□□□□□ -0.39
DNMT3A-202ENST00000321117 H0YAE9 185 aa12.61□□□□□ -0.39
DNMT3A-202ENST00000321117 ZNF701M0R085 212 aaPredicted RBP12.61□□□□□ -0.39
DNMT3A-202ENST00000321117 CXCR6O00574 342 aa12.61□□□□□ -0.39
DNMT3A-202ENST00000321117 SNPHO15079 494 aa12.61□□□□□ -0.39
DNMT3A-202ENST00000321117 PAPSS2O95340 614 aaPredicted RBP12.61□□□□□ -0.39
DNMT3A-202ENST00000321117 C1QAP02745 245 aa12.61□□□□□ -0.39
DNMT3A-202ENST00000321117 PRKCGP05129 697 aa12.61□□□□□ -0.39
DNMT3A-202ENST00000321117 MAGEA12P43365 314 aa12.61□□□□□ -0.39
DNMT3A-202ENST00000321117 GALNT1Q10472 559 aaPredicted RBP12.61□□□□□ -0.39
DNMT3A-202ENST00000321117 FAM174BQ3ZCQ3 159 aa12.61□□□□□ -0.39
DNMT3A-202ENST00000321117 ZCCHC8Q6NZY4 707 aaKnown RBP12.61□□□□□ -0.39
DNMT3A-202ENST00000321117 CARNMT1Q8N4J0 409 aa12.61□□□□□ -0.39
DNMT3A-202ENST00000321117 RSPH1Q8WYR4 309 aa12.61□□□□□ -0.39
DNMT3A-202ENST00000321117 PROX1Q92786 737 aa12.61□□□□□ -0.39
DNMT3A-202ENST00000321117 IL12RB2Q99665 862 aa12.61□□□□□ -0.39
DNMT3A-202ENST00000321117 WDR6Q9NNW5 1121 aaKnown RBP12.61□□□□□ -0.39
DNMT3A-202ENST00000321117 MAGP20916 626 aa12.61□□□□□ -0.39
DNMT3A-202ENST00000321117 SEPHS1P49903 392 aa12.61□□□□□ -0.39
DNMT3A-202ENST00000321117 INHBCP55103 352 aa12.61□□□□□ -0.39
DNMT3A-202ENST00000321117 IL10RBQ08334 325 aa12.61□□□□□ -0.39
DNMT3A-202ENST00000321117 TUSC3Q13454 348 aa12.61□□□□□ -0.39
DNMT3A-202ENST00000321117 APOFQ13790 326 aa12.61□□□□□ -0.39
DNMT3A-202ENST00000321117 CARTPTQ16568 116 aa12.61□□□□□ -0.39
DNMT3A-202ENST00000321117 ZNF789Q5FWF6 425 aa12.61□□□□□ -0.39
DNMT3A-202ENST00000321117 ARMCX4Q5H9R4 360 aa12.61□□□□□ -0.39
DNMT3A-202ENST00000321117 CYP20A1Q6UW02 462 aa12.61□□□□□ -0.39
DNMT3A-202ENST00000321117 ZNF605Q86T29 641 aa12.61□□□□□ -0.39
DNMT3A-202ENST00000321117 CIR1Q86X95 450 aaPredicted RBP12.61□□□□□ -0.39
DNMT3A-202ENST00000321117 PNPLA1Q8N8W4 532 aa12.61□□□□□ -0.39
DNMT3A-202ENST00000321117 GPR152Q8TDT2 470 aa12.61□□□□□ -0.39
DNMT3A-202ENST00000321117 ANKRD49Q8WVL7 239 aa12.61□□□□□ -0.39
DNMT3A-202ENST00000321117 CDK15Q96Q40 435 aa12.61□□□□□ -0.39
DNMT3A-202ENST00000321117 FEM1AQ9BSK4 669 aa12.61□□□□□ -0.39
DNMT3A-202ENST00000321117 TOR3AQ9H497 397 aa12.61□□□□□ -0.39
DNMT3A-202ENST00000321117 RPF2Q9H7B2 306 aaKnown RBP12.61□□□□□ -0.39
DNMT3A-202ENST00000321117 OLAHQ9NV23 265 aa12.61□□□□□ -0.39
DNMT3A-202ENST00000321117 ADPRHL2Q9NX46 363 aa12.61□□□□□ -0.39
DNMT3A-202ENST00000321117 H3BMQ9 156 aa12.61□□□□□ -0.39
DNMT3A-202ENST00000321117 CDC7O00311 574 aa12.61□□□□□ -0.39
DNMT3A-202ENST00000321117 RFXANKO14593 260 aa12.61□□□□□ -0.39
DNMT3A-202ENST00000321117 PRMT5O14744 637 aaPredicted RBP12.61□□□□□ -0.39
DNMT3A-202ENST00000321117 PORP16435 677 aaPredicted RBP12.61□□□□□ -0.39
DNMT3A-202ENST00000321117 SLC6A2P23975 617 aa12.61□□□□□ -0.39
DNMT3A-202ENST00000321117 DPP6P42658 865 aa12.61□□□□□ -0.39
DNMT3A-202ENST00000321117 PPP3CCP48454 512 aa12.61□□□□□ -0.39
DNMT3A-202ENST00000321117 MLLT6P55198 1093 aaPredicted RBP12.61□□□□□ -0.39
DNMT3A-202ENST00000321117 SH3BP2P78314 561 aa12.61□□□□□ -0.39
DNMT3A-202ENST00000321117 CYP4F3Q08477 520 aa12.61□□□□□ -0.39
DNMT3A-202ENST00000321117 NFATC3Q12968 1075 aa12.61□□□□□ -0.39
DNMT3A-202ENST00000321117 MTA1Q13330 715 aa12.61□□□□□ -0.39
DNMT3A-202ENST00000321117 CCDC85BQ15834 202 aaPredicted RBP12.61□□□□□ -0.39
DNMT3A-202ENST00000321117 TRAF7Q6Q0C0 670 aa12.61□□□□□ -0.39
DNMT3A-202ENST00000321117 NECAB2Q7Z6G3 386 aa12.61□□□□□ -0.39
DNMT3A-202ENST00000321117 SYT12Q8IV01 421 aa12.61□□□□□ -0.39
DNMT3A-202ENST00000321117 MFSD2AQ8NA29 543 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms