RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 KCNA7Q96RP8 456 aa7.75□□□□□ -1.17
CNOT4-201ENST00000315544 SLC39A3Q9BRY0 314 aa7.75□□□□□ -1.17
CNOT4-201ENST00000315544 TAPBPLQ9BX59 468 aa7.75□□□□□ -1.17
CNOT4-201ENST00000315544 YIPF3Q9GZM5 350 aa7.75□□□□□ -1.17
CNOT4-201ENST00000315544 PREBQ9HCU5 417 aa7.75□□□□□ -1.17
CNOT4-201ENST00000315544 NGRNQ9NPE2 291 aaKnown RBP7.75□□□□□ -1.17
CNOT4-201ENST00000315544 SNRNP200O75643 2136 aaKnown RBP7.75□□□□□ -1.17
CNOT4-201ENST00000315544 WBP4O75554 376 aaKnown RBP7.74□□□□□ -1.17
CNOT4-201ENST00000315544 ABLIM3O94929 683 aa7.74□□□□□ -1.17
CNOT4-201ENST00000315544 GLP2RO95838 553 aa7.74□□□□□ -1.17
CNOT4-201ENST00000315544 UGT1A6P19224 532 aa7.74□□□□□ -1.17
CNOT4-201ENST00000315544 MSX2P35548 267 aaPredicted RBP7.74□□□□□ -1.17
CNOT4-201ENST00000315544 MASP1P48740 699 aa7.74□□□□□ -1.17
CNOT4-201ENST00000315544 CD97P48960 835 aa7.74□□□□□ -1.17
CNOT4-201ENST00000315544 CLCN5P51795 746 aa7.74□□□□□ -1.17
CNOT4-201ENST00000315544 PTPRRQ15256 657 aa7.74□□□□□ -1.17
CNOT4-201ENST00000315544 CNGA3Q16281 694 aa7.74□□□□□ -1.17
CNOT4-201ENST00000315544 GPRC6AQ5T6X5 926 aa7.74□□□□□ -1.17
CNOT4-201ENST00000315544 PRR23BQ6ZRT6 265 aa7.74□□□□□ -1.17
CNOT4-201ENST00000315544 SPATA6LQ8N4H0 392 aa7.74□□□□□ -1.17
CNOT4-201ENST00000315544 CARNMT1Q8N4J0 409 aa7.74□□□□□ -1.17
CNOT4-201ENST00000315544 DTWD1Q8N5C7 304 aa7.74□□□□□ -1.17
CNOT4-201ENST00000315544 TRPC4APQ8TEL6 797 aa7.74□□□□□ -1.17
CNOT4-201ENST00000315544 PPP4R1Q8TF05 950 aa7.74□□□□□ -1.17
CNOT4-201ENST00000315544 PIH1D2Q8WWB5 315 aa7.74□□□□□ -1.17
CNOT4-201ENST00000315544 MYO19Q96H55 970 aa7.74□□□□□ -1.17
CNOT4-201ENST00000315544 RPL10LQ96L21 214 aaKnown RBP7.74□□□□□ -1.17
CNOT4-201ENST00000315544 BARD1Q99728 777 aaKnown RBP7.74□□□□□ -1.17
CNOT4-201ENST00000315544 OSBPL11Q9BXB4 747 aa7.74□□□□□ -1.17
CNOT4-201ENST00000315544 TRIM54Q9BYV2 358 aa7.74□□□□□ -1.17
CNOT4-201ENST00000315544 ILKAPQ9H0C8 392 aaPredicted RBP7.74□□□□□ -1.17
CNOT4-201ENST00000315544 INTS10Q9NVR2 710 aaKnown RBP7.74□□□□□ -1.17
CNOT4-201ENST00000315544 FBXO5Q9UKT4 447 aa7.74□□□□□ -1.17
CNOT4-201ENST00000315544 HPRP00739 348 aa7.74□□□□□ -1.17
CNOT4-201ENST00000315544 F9P00740 461 aa7.74□□□□□ -1.17
CNOT4-201ENST00000315544 PDGFRBP09619 1106 aa7.74□□□□□ -1.17
CNOT4-201ENST00000315544 CCDC166P0CW27 439 aa7.74□□□□□ -1.17
CNOT4-201ENST00000315544 RHOQP17081 205 aa7.74□□□□□ -1.17
CNOT4-201ENST00000315544 CD22P20273 847 aa7.74□□□□□ -1.17
CNOT4-201ENST00000315544 PSME3P61289 254 aa7.74□□□□□ -1.17
CNOT4-201ENST00000315544 IL10RBQ08334 325 aa7.74□□□□□ -1.17
CNOT4-201ENST00000315544 OXA1LQ15070 435 aa7.74□□□□□ -1.17
CNOT4-201ENST00000315544 PPP6R3Q5H9R7 873 aaPredicted RBP7.74□□□□□ -1.17
CNOT4-201ENST00000315544 GPR149Q86SP6 731 aa7.74□□□□□ -1.17
CNOT4-201ENST00000315544 TMEM173Q86WV6 379 aaPredicted RBP7.74□□□□□ -1.17
CNOT4-201ENST00000315544 PPP1R14BQ96C90 147 aa7.74□□□□□ -1.17
CNOT4-201ENST00000315544 FUBP3Q96I24 572 aaKnown RBP eCLIP7.74□□□□□ -1.17
CNOT4-201ENST00000315544 PSKH2Q96QS6 385 aa7.74□□□□□ -1.17
CNOT4-201ENST00000315544 CDCA3Q99618 268 aaPredicted RBP7.74□□□□□ -1.17
CNOT4-201ENST00000315544 SLIRPQ9GZT3 109 aaKnown RBP7.74□□□□□ -1.17
CNOT4-201ENST00000315544 EPS8L2Q9H6S3 715 aa7.74□□□□□ -1.17
CNOT4-201ENST00000315544 TMEM184CQ9NVA4 438 aa7.74□□□□□ -1.17
CNOT4-201ENST00000315544 CLEC1BQ9P126 229 aa7.74□□□□□ -1.17
CNOT4-201ENST00000315544 GIMAP2Q9UG22 337 aa7.74□□□□□ -1.17
CNOT4-201ENST00000315544 ST3GAL5Q9UNP4 418 aa7.74□□□□□ -1.17
CNOT4-201ENST00000315544 CEP192Q8TEP8 1941 aa7.74□□□□□ -1.17
CNOT4-201ENST00000315544 CCDC78A2IDD5 438 aa7.74□□□□□ -1.17
CNOT4-201ENST00000315544 ARPC2O15144 300 aa7.74□□□□□ -1.17
CNOT4-201ENST00000315544 FUCA1P04066 466 aa7.74□□□□□ -1.17
CNOT4-201ENST00000315544 TPH1P17752 444 aa7.74□□□□□ -1.17
CNOT4-201ENST00000315544 ME2P23368 584 aa7.74□□□□□ -1.17
CNOT4-201ENST00000315544 CHMP24386 653 aa7.74□□□□□ -1.17
CNOT4-201ENST00000315544 MRPS22P82650 360 aaKnown RBP7.74□□□□□ -1.17
CNOT4-201ENST00000315544 ZBED5Q49AG3 693 aa7.74□□□□□ -1.17
CNOT4-201ENST00000315544 GGTA1PQ4G0N0 100 aa7.74□□□□□ -1.17
CNOT4-201ENST00000315544 CHRDL2Q6WN34 429 aa7.74□□□□□ -1.17
CNOT4-201ENST00000315544 PIWIL3Q7Z3Z3 882 aaKnown RBP7.74□□□□□ -1.17
CNOT4-201ENST00000315544 PTOV1Q86YD1 416 aa7.74□□□□□ -1.17
CNOT4-201ENST00000315544 RBM12BQ8IXT5 1001 aaKnown RBP7.74□□□□□ -1.17
CNOT4-201ENST00000315544 TAB3Q8N5C8 712 aaPredicted RBP7.74□□□□□ -1.17
CNOT4-201ENST00000315544 TRPV3Q8NET8 790 aa7.74□□□□□ -1.17
CNOT4-201ENST00000315544 C19orf60Q96EN9 201 aa7.74□□□□□ -1.17
CNOT4-201ENST00000315544 DNAJC1Q96KC8 554 aaKnown RBP7.74□□□□□ -1.17
CNOT4-201ENST00000315544 ZNF560Q96MR9 790 aa7.74□□□□□ -1.17
CNOT4-201ENST00000315544 ZNF382Q96SR6 550 aa7.74□□□□□ -1.17
CNOT4-201ENST00000315544 NDUFA13Q9P0J0 144 aa7.74□□□□□ -1.17
CNOT4-201ENST00000315544 OSGIN1Q9UJX0 560 aa7.74□□□□□ -1.17
CNOT4-201ENST00000315544 PPT2Q9UMR5 302 aa7.74□□□□□ -1.17
CNOT4-201ENST00000315544 LSM2Q9Y333 95 aaKnown RBP7.74□□□□□ -1.17
CNOT4-201ENST00000315544 TSPAN11A1L157 253 aa7.73□□□□□ -1.17
CNOT4-201ENST00000315544 COQ9O75208 318 aa7.73□□□□□ -1.17
CNOT4-201ENST00000315544 ENO2P09104 434 aaPredicted RBP7.73□□□□□ -1.17
CNOT4-201ENST00000315544 ADAM15Q13444 863 aa7.73□□□□□ -1.17
CNOT4-201ENST00000315544 PTPRCAPQ14761 206 aa7.73□□□□□ -1.17
CNOT4-201ENST00000315544 FBXL22Q6P050 247 aa7.73□□□□□ -1.17
CNOT4-201ENST00000315544 PRSS48Q7RTY5 328 aa7.73□□□□□ -1.17
CNOT4-201ENST00000315544 AMIGO2Q86SJ2 522 aa7.73□□□□□ -1.17
CNOT4-201ENST00000315544 DDX53Q86TM3 631 aaKnown RBP7.73□□□□□ -1.17
CNOT4-201ENST00000315544 OR2T34Q8NGX1 318 aa7.73□□□□□ -1.17
CNOT4-201ENST00000315544 OR2T3Q8NH03 318 aa7.73□□□□□ -1.17
CNOT4-201ENST00000315544 MRPL38Q96DV4 380 aaKnown RBP7.73□□□□□ -1.17
CNOT4-201ENST00000315544 MARK4Q96L34 752 aa7.73□□□□□ -1.17
CNOT4-201ENST00000315544 CPPED1Q9BRF8 314 aaPredicted RBP7.73□□□□□ -1.17
CNOT4-201ENST00000315544 YTHDF1Q9BYJ9 559 aaKnown RBP7.73□□□□□ -1.17
CNOT4-201ENST00000315544 MUC13Q9H3R2 512 aa7.73□□□□□ -1.17
CNOT4-201ENST00000315544 POMKQ9H5K3 350 aa7.73□□□□□ -1.17
CNOT4-201ENST00000315544 KAT8Q9H7Z6 458 aaKnown RBP7.73□□□□□ -1.17
CNOT4-201ENST00000315544 CDC14AQ9UNH5 594 aa7.73□□□□□ -1.17
CNOT4-201ENST00000315544 MYOFQ9NZM1 2061 aa7.73□□□□□ -1.17
CNOT4-201ENST00000315544 OR51F1A6NGY5 319 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms