RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 GDPD4Q6W3E5 623 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 KYAT3Q6YP21 454 aaKnown RBP4.89□□□□□ -1.63
CAST-201ENST00000309190 PARS2Q7L3T8 475 aaKnown RBP4.89□□□□□ -1.63
CAST-201ENST00000309190 MILR1Q7Z6M3 343 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 CPLX4Q7Z7G2 160 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 KLHDC8BQ8IXV7 354 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 RFWD2Q8NHY2 731 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 OR8D1Q8WZ84 308 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 MYRFLQ96LU7 910 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 TSNARE1Q96NA8 513 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 CCDC28BQ9BUN5 200 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 TMEM245Q9H330 911 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 C6orf106Q9H6K1 298 aaPredicted RBP4.89□□□□□ -1.63
CAST-201ENST00000309190 SLC17A7Q9P2U7 560 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 GIMAP2Q9UG22 337 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 TEX264Q9Y6I9 313 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 CCDC168Q8NDH2 2452 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 COL4A3Q01955 1670 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 TMEM202A6NGA9 273 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 B4DGG1 531 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 F8W8V4 182 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 WNT9AO14904 365 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 CDH16O75309 829 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 LYPLA1O75608 230 aaPredicted RBP4.89□□□□□ -1.63
CAST-201ENST00000309190 GBAP04062 536 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 TSHRP16473 764 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 GNALP38405 381 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 GNPDA1P46926 289 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 CLCN2P51788 898 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 RPS6KA3P51812 740 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 FOXL2P58012 376 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 RPL26P61254 145 aaKnown RBP4.89□□□□□ -1.63
CAST-201ENST00000309190 PPP2CBP62714 309 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 PPP2CAP67775 309 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 KCNC4Q03721 635 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 APOFQ13790 326 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 GAS6Q14393 721 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 GRM3Q14832 879 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 SLC9A5Q14940 896 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 ANKRD20A4Q4UJ75 823 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 LRRC38Q5VT99 294 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 ARMC3Q5W041 872 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 PIWIL4Q7Z3Z4 852 aaKnown RBP4.89□□□□□ -1.63
CAST-201ENST00000309190 TREML1Q86YW5 311 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 TMEM151AQ8N4L1 468 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.89□□□□□ -1.63
CAST-201ENST00000309190 FAM46DQ8NEK8 389 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 GPR150Q8NGU9 434 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 CXorf40AQ8TE69 158 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 C2orf15Q8WU43 125 aaKnown RBP4.89□□□□□ -1.63
CAST-201ENST00000309190 GFM2Q969S9 779 aaKnown RBP4.89□□□□□ -1.63
CAST-201ENST00000309190 RILPQ96NA2 401 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 QKIQ96PU8 341 aaKnown RBP eCLIP4.89□□□□□ -1.63
CAST-201ENST00000309190 FAM83CQ9BQN1 747 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 ADGRE3Q9BY15 652 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 MAGEH1Q9H213 219 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 CARS2Q9HA77 564 aaKnown RBP4.89□□□□□ -1.63
CAST-201ENST00000309190 GPAMQ9HCL2 828 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 MBNL1Q9NR56 388 aaKnown RBP4.89□□□□□ -1.63
CAST-201ENST00000309190 PHTF1Q9UMS5 762 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 EFR3BQ9Y2G0 817 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 IRAK3Q9Y616 596 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 FRMPD3Q5JV73 1810 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 ILVBLA1L0T0 632 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 SAP18O00422 153 aaKnown RBP4.89□□□□□ -1.63
CAST-201ENST00000309190 OPHN1O60890 802 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 SCGB1D2O95969 90 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 LHCGRP22888 699 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 ADRA1DP25100 572 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 SEPHS1P49903 392 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 GEMP55040 296 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 ROR2Q01974 943 aaKnown RBP4.89□□□□□ -1.63
CAST-201ENST00000309190 ZBTB16Q05516 673 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 SRSF11Q05519 484 aaKnown RBP4.89□□□□□ -1.63
CAST-201ENST00000309190 PPIDQ08752 370 aaKnown RBP4.89□□□□□ -1.63
CAST-201ENST00000309190 NFATC2Q13469 925 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 KCNJ11Q14654 390 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 ZNF284Q2VY69 593 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 IRGCQ6NXR0 463 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 CDHR3Q6ZTQ4 885 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 HTR3DQ70Z44 454 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 RNF168Q8IYW5 571 aaPredicted RBP4.89□□□□□ -1.63
CAST-201ENST00000309190 RNF175Q8N4F7 328 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 METTL27Q8N6F8 245 aaPredicted RBP4.89□□□□□ -1.63
CAST-201ENST00000309190 GPR26Q8NDV2 337 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 ELMO1Q92556 727 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 CDKL2Q92772 493 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 NT5C3BQ969T7 300 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 HDAC11Q96DB2 347 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 PANX3Q96QZ0 392 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 GPR21Q99679 349 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 TTLL2Q9BWV7 592 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 TCEAL2Q9H3H9 227 aaPredicted RBP4.89□□□□□ -1.63
CAST-201ENST00000309190 TMEM248Q9NWD8 314 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 RRN3Q9NYV6 651 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 FBXO5Q9UKT4 447 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 A0A088AWK7 358 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 BTN3A1O00481 513 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 TPP1O14773 563 aa4.89□□□□□ -1.63
CAST-201ENST00000309190 PRAMEF10O60809 474 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms